RNA–Protein interactions for RNA: ENST00000533011.5

CHMP4A-206, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-206ENST00000533011 GAS2L2Q8NHY3 880 aa13.55□□□□□ -0.24
CHMP4A-206ENST00000533011 CNKSR1Q969H4 720 aa13.55□□□□□ -0.24
CHMP4A-206ENST00000533011 GPR101Q96P66 508 aaPredicted RBP13.55□□□□□ -0.24
CHMP4A-206ENST00000533011 LGR6Q9HBX8 967 aa13.55□□□□□ -0.24
CHMP4A-206ENST00000533011 DLEC1Q9Y238 1755 aa13.55□□□□□ -0.24
CHMP4A-206ENST00000533011 RNMTO43148 476 aaKnown RBP13.54□□□□□ -0.24
CHMP4A-206ENST00000533011 CAPNS2Q96L46 248 aa13.54□□□□□ -0.24
CHMP4A-206ENST00000533011 SOS1Q07889 1333 aaPredicted RBP13.54□□□□□ -0.24
CHMP4A-206ENST00000533011 ADAMTS7Q9UKP4 1686 aa13.53□□□□□ -0.24
CHMP4A-206ENST00000533011 NRXN2Q9P2S2 1712 aa13.53□□□□□ -0.24
CHMP4A-206ENST00000533011 GNAT3A8MTJ3 354 aa13.53□□□□□ -0.24
CHMP4A-206ENST00000533011 EPHX2P34913 555 aa13.53□□□□□ -0.24
CHMP4A-206ENST00000533011 PRPF38BQ5VTL8 546 aaKnown RBP13.53□□□□□ -0.24
CHMP4A-206ENST00000533011 PHACTR3Q96KR7 559 aa13.53□□□□□ -0.24
CHMP4A-206ENST00000533011 MCOLN1Q9GZU1 580 aa13.53□□□□□ -0.24
CHMP4A-206ENST00000533011 SLC52A2Q9HAB3 445 aa13.53□□□□□ -0.24
CHMP4A-206ENST00000533011 ZNF316A6NFI3 1004 aaPredicted RBP13.52□□□□□ -0.25
CHMP4A-206ENST00000533011 STYK1Q6J9G0 422 aa13.52□□□□□ -0.25
CHMP4A-206ENST00000533011 MYBBP1AQ9BQG0 1328 aaKnown RBP13.52□□□□□ -0.25
CHMP4A-206ENST00000533011 FER1L6Q2WGJ9 1857 aa13.51□□□□□ -0.25
CHMP4A-206ENST00000533011 MRC1P22897 1456 aa13.51□□□□□ -0.25
CHMP4A-206ENST00000533011 A0A087WZG4 1122 aa13.51□□□□□ -0.25
CHMP4A-206ENST00000533011 DDX21Q9NR30 783 aaKnown RBP eCLIP13.51□□□□□ -0.25
CHMP4A-206ENST00000533011 NEFMP07197 916 aa13.5□□□□□ -0.25
CHMP4A-206ENST00000533011 CYP19A1P11511 503 aaPredicted RBP13.5□□□□□ -0.25
CHMP4A-206ENST00000533011 IL17REQ8NFR9 667 aa13.5□□□□□ -0.25
CHMP4A-206ENST00000533011 PNNQ9H307 717 aaKnown RBP13.5□□□□□ -0.25
CHMP4A-206ENST00000533011 PRKRIP1Q9H875 184 aaPredicted RBP13.5□□□□□ -0.25
CHMP4A-206ENST00000533011 BCL2L12Q9HB09 334 aa13.5□□□□□ -0.25
CHMP4A-206ENST00000533011 ZNF219Q9P2Y4 722 aaPredicted RBP13.5□□□□□ -0.25
CHMP4A-206ENST00000533011 AFDNP55196 1824 aaKnown RBP13.5□□□□□ -0.25
CHMP4A-206ENST00000533011 COL15A1P39059 1388 aa13.49□□□□□ -0.25
CHMP4A-206ENST00000533011 TEFQ10587 303 aa13.49□□□□□ -0.25
CHMP4A-206ENST00000533011 DGKZQ13574 1117 aa13.49□□□□□ -0.25
CHMP4A-206ENST00000533011 MAP1SQ66K74 1059 aaPredicted RBP13.49□□□□□ -0.25
CHMP4A-206ENST00000533011 PAXIP1Q6ZW49 1069 aaPredicted RBP13.49□□□□□ -0.25
CHMP4A-206ENST00000533011 VSIG10Q8N0Z9 540 aa13.49□□□□□ -0.25
CHMP4A-206ENST00000533011 TNRC18O15417 2968 aaPredicted RBP13.48□□□□□ -0.25
CHMP4A-206ENST00000533011 DNAJC10Q8IXB1 793 aa13.48□□□□□ -0.25
CHMP4A-206ENST00000533011 GPC2Q8N158 579 aa13.48□□□□□ -0.25
CHMP4A-206ENST00000533011 GCC1Q96CN9 775 aa13.48□□□□□ -0.25
CHMP4A-206ENST00000533011 MASTLQ96GX5 879 aa13.48□□□□□ -0.25
CHMP4A-206ENST00000533011 BRPF1P55201 1214 aaPredicted RBP13.47□□□□□ -0.25
CHMP4A-206ENST00000533011 CCDC93Q567U6 631 aa13.47□□□□□ -0.25
CHMP4A-206ENST00000533011 PRPF40BQ6NWY9 871 aaKnown RBP13.47□□□□□ -0.25
CHMP4A-206ENST00000533011 RTKN2Q8IZC4 609 aa13.47□□□□□ -0.25
CHMP4A-206ENST00000533011 RTF1Q92541 710 aaKnown RBP13.47□□□□□ -0.25
CHMP4A-206ENST00000533011 HHIPL1Q96JK4 782 aa13.47□□□□□ -0.25
CHMP4A-206ENST00000533011 CEMIPQ8WUJ3 1361 aa13.46□□□□□ -0.25
CHMP4A-206ENST00000533011 THSD7BQ9C0I4 1608 aa13.46□□□□□ -0.25
CHMP4A-206ENST00000533011 HTATSF1O43719 755 aaKnown RBP13.46□□□□□ -0.25
CHMP4A-206ENST00000533011 SRGNP10124 158 aa13.46□□□□□ -0.25
CHMP4A-206ENST00000533011 FKBP4Q02790 459 aaKnown RBP eCLIP13.46□□□□□ -0.25
CHMP4A-206ENST00000533011 SLC39A6Q13433 755 aa13.46□□□□□ -0.25
CHMP4A-206ENST00000533011 CYP4F22Q6NT55 531 aa13.46□□□□□ -0.25
CHMP4A-206ENST00000533011 PLEKHF1Q96S99 279 aa13.46□□□□□ -0.25
CHMP4A-206ENST00000533011 TLL2Q9Y6L7 1015 aa13.46□□□□□ -0.25
CHMP4A-206ENST00000533011 CARMIL3Q8ND23 1372 aa13.45□□□□□ -0.26
CHMP4A-206ENST00000533011 SIPA1L3O60292 1781 aaPredicted RBP13.45□□□□□ -0.26
CHMP4A-206ENST00000533011 ADAMTSL1Q8N6G6 1762 aa13.45□□□□□ -0.26
CHMP4A-206ENST00000533011 FZD9O00144 591 aa13.45□□□□□ -0.26
CHMP4A-206ENST00000533011 ST5P78524 1137 aa13.45□□□□□ -0.26
CHMP4A-206ENST00000533011 PRR5LQ6MZQ0 368 aa13.45□□□□□ -0.26
CHMP4A-206ENST00000533011 BICDL1Q6ZP65 573 aa13.45□□□□□ -0.26
CHMP4A-206ENST00000533011 TTC5Q8N0Z6 440 aa13.45□□□□□ -0.26
CHMP4A-206ENST00000533011 TJP1Q07157 1748 aa13.44□□□□□ -0.26
CHMP4A-206ENST00000533011 MAPK8IP3Q9UPT6 1336 aa13.44□□□□□ -0.26
CHMP4A-206ENST00000533011 NPHP1O15259 732 aa13.44□□□□□ -0.26
CHMP4A-206ENST00000533011 STARD3NLO95772 234 aa13.44□□□□□ -0.26
CHMP4A-206ENST00000533011 LMOD1P29536 600 aaPredicted RBP13.44□□□□□ -0.26
CHMP4A-206ENST00000533011 GRM1Q13255 1194 aa13.44□□□□□ -0.26
CHMP4A-206ENST00000533011 ZNF790Q6PG37 636 aa13.44□□□□□ -0.26
CHMP4A-206ENST00000533011 C7orf43Q8WVR3 580 aa13.44□□□□□ -0.26
CHMP4A-206ENST00000533011 SETDB2Q96T68 719 aa13.44□□□□□ -0.26
CHMP4A-206ENST00000533011 ZBTB1Q9Y2K1 713 aa13.44□□□□□ -0.26
CHMP4A-206ENST00000533011 UBR2Q8IWV8 1755 aa13.43□□□□□ -0.26
CHMP4A-206ENST00000533011 EIF5P55010 431 aaKnown RBP13.43□□□□□ -0.26
CHMP4A-206ENST00000533011 WDR43Q15061 677 aaKnown RBP eCLIP13.43□□□□□ -0.26
CHMP4A-206ENST00000533011 NFE2L2Q16236 605 aa13.43□□□□□ -0.26
CHMP4A-206ENST00000533011 USP50Q70EL3 339 aaPredicted RBP13.43□□□□□ -0.26
CHMP4A-206ENST00000533011 MCM10Q7L590 875 aa13.43□□□□□ -0.26
CHMP4A-206ENST00000533011 JDP2Q8WYK2 163 aa13.43□□□□□ -0.26
CHMP4A-206ENST00000533011 RNF123Q5XPI4 1314 aa13.42□□□□□ -0.26
CHMP4A-206ENST00000533011 ZNF541Q9H0D2 1346 aa13.42□□□□□ -0.26
CHMP4A-206ENST00000533011 BTBD11A6QL63 1104 aa13.42□□□□□ -0.26
CHMP4A-206ENST00000533011 DCTN1Q14203 1278 aa13.42□□□□□ -0.26
CHMP4A-206ENST00000533011 CST9Q5W186 159 aa13.42□□□□□ -0.26
CHMP4A-206ENST00000533011 TBC1D9BQ66K14 1250 aa13.42□□□□□ -0.26
CHMP4A-206ENST00000533011 NPM2Q86SE8 214 aaKnown RBP13.42□□□□□ -0.26
CHMP4A-206ENST00000533011 CNBD1Q8NA66 436 aa13.42□□□□□ -0.26
CHMP4A-206ENST00000533011 TSKSQ9UJT2 592 aa13.42□□□□□ -0.26
CHMP4A-206ENST00000533011 DLG5Q8TDM6 1919 aa13.42□□□□□ -0.26
CHMP4A-206ENST00000533011 NPR1P16066 1061 aa13.41□□□□□ -0.26
CHMP4A-206ENST00000533011 CANXP27824 592 aaKnown RBP13.41□□□□□ -0.26
CHMP4A-206ENST00000533011 EIF6P56537 245 aaKnown RBP13.41□□□□□ -0.26
CHMP4A-206ENST00000533011 SAPCD2Q86UD0 394 aa13.41□□□□□ -0.26
CHMP4A-206ENST00000533011 ZNF496Q96IT1 587 aaPredicted RBP13.41□□□□□ -0.26
CHMP4A-206ENST00000533011 TEX13AQ9BXU3 409 aaPredicted RBP13.41□□□□□ -0.26
CHMP4A-206ENST00000533011 AOC2O75106 756 aa13.4□□□□□ -0.26
CHMP4A-206ENST00000533011 IARSP41252 1262 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms