RNA–Protein interactions for RNA: ENST00000532708.5

TRAF3IP2-212, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,956 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-212ENST00000532708 ZBTB3Q9H5J0 574 aa15.32■□□□□ 0.04
TRAF3IP2-212ENST00000532708 HLFQ16534 295 aa15.31■□□□□ 0.04
TRAF3IP2-212ENST00000532708 KIF6Q6ZMV9 814 aa15.31■□□□□ 0.04
TRAF3IP2-212ENST00000532708 NLGN1Q8N2Q7 840 aa15.31■□□□□ 0.04
TRAF3IP2-212ENST00000532708 PTGER2P43116 358 aa15.31■□□□□ 0.04
TRAF3IP2-212ENST00000532708 BICDL1Q6ZP65 573 aa15.31■□□□□ 0.04
TRAF3IP2-212ENST00000532708 G2E3Q7L622 706 aa15.31■□□□□ 0.04
TRAF3IP2-212ENST00000532708 MAP3K15Q6ZN16 1313 aa15.3■□□□□ 0.04
TRAF3IP2-212ENST00000532708 CENPBP07199 599 aaPredicted RBP15.29■□□□□ 0.04
TRAF3IP2-212ENST00000532708 MMP10P09238 476 aa15.29■□□□□ 0.04
TRAF3IP2-212ENST00000532708 TBC1D9BQ66K14 1250 aa15.29■□□□□ 0.04
TRAF3IP2-212ENST00000532708 SGIP1Q9BQI5 828 aa15.29■□□□□ 0.04
TRAF3IP2-212ENST00000532708 BCL2L13Q9BXK5 485 aa15.29■□□□□ 0.04
TRAF3IP2-212ENST00000532708 POLD1P28340 1107 aa15.28■□□□□ 0.04
TRAF3IP2-212ENST00000532708 NFIXQ14938 502 aa15.28■□□□□ 0.04
TRAF3IP2-212ENST00000532708 ANKRD13DQ6ZTN6 518 aa15.28■□□□□ 0.04
TRAF3IP2-212ENST00000532708 SSH1Q8WYL5 1049 aa15.28■□□□□ 0.04
TRAF3IP2-212ENST00000532708 BCORQ6W2J9 1755 aa15.28■□□□□ 0.04
TRAF3IP2-212ENST00000532708 SCN7AQ01118 1682 aa15.28■□□□□ 0.04
TRAF3IP2-212ENST00000532708 ERVV-1B6SEH8 477 aa15.27■□□□□ 0.04
TRAF3IP2-212ENST00000532708 TM4SF1P30408 202 aa15.27■□□□□ 0.04
TRAF3IP2-212ENST00000532708 DDR1Q08345 913 aa15.27■□□□□ 0.03
TRAF3IP2-212ENST00000532708 CLEC4GQ6UXB4 293 aa15.27■□□□□ 0.03
TRAF3IP2-212ENST00000532708 ZNF652Q9Y2D9 606 aa15.27■□□□□ 0.03
TRAF3IP2-212ENST00000532708 NUP98P52948 1817 aa15.27■□□□□ 0.03
TRAF3IP2-212ENST00000532708 CT47B1P0C2W7 299 aaPredicted RBP15.26■□□□□ 0.03
TRAF3IP2-212ENST00000532708 FLIIQ13045 1269 aa15.26■□□□□ 0.03
TRAF3IP2-212ENST00000532708 GIGYF2Q6Y7W6 1299 aaKnown RBP15.26■□□□□ 0.03
TRAF3IP2-212ENST00000532708 RIC3Q7Z5B4 369 aa15.26■□□□□ 0.03
TRAF3IP2-212ENST00000532708 PLBD2Q8NHP8 589 aa15.26■□□□□ 0.03
TRAF3IP2-212ENST00000532708 COL24A1Q17RW2 1714 aa15.26■□□□□ 0.03
TRAF3IP2-212ENST00000532708 CACNA1FO60840 1977 aa15.26■□□□□ 0.03
TRAF3IP2-212ENST00000532708 GPTP24298 496 aa15.25■□□□□ 0.03
TRAF3IP2-212ENST00000532708 MRPL50Q8N5N7 158 aaKnown RBP15.25■□□□□ 0.03
TRAF3IP2-212ENST00000532708 ZNF428Q96B54 188 aa15.25■□□□□ 0.03
TRAF3IP2-212ENST00000532708 NIP7Q9Y221 180 aaKnown RBP eCLIP15.25■□□□□ 0.03
TRAF3IP2-212ENST00000532708 PI4KAP2A4QPH2 592 aa15.25■□□□□ 0.03
TRAF3IP2-212ENST00000532708 POLRMTO00411 1230 aaKnown RBP15.25■□□□□ 0.03
TRAF3IP2-212ENST00000532708 RARSP54136 660 aaKnown RBP15.25■□□□□ 0.03
TRAF3IP2-212ENST00000532708 FKBP5Q13451 457 aaPredicted RBP15.25■□□□□ 0.03
TRAF3IP2-212ENST00000532708 PI4KAP1Q8N8J0 262 aa15.25■□□□□ 0.03
TRAF3IP2-212ENST00000532708 SETDB2Q96T68 719 aa15.25■□□□□ 0.03
TRAF3IP2-212ENST00000532708 SMC4Q9NTJ3 1288 aa15.25■□□□□ 0.03
TRAF3IP2-212ENST00000532708 PPP1R1BQ9UD71 204 aaPredicted RBP15.25■□□□□ 0.03
TRAF3IP2-212ENST00000532708 PARP3Q9Y6F1 533 aa15.25■□□□□ 0.03
TRAF3IP2-212ENST00000532708 FAM177BA6PVY3 158 aa15.24■□□□□ 0.03
TRAF3IP2-212ENST00000532708 ALDH1L2Q3SY69 923 aa15.24■□□□□ 0.03
TRAF3IP2-212ENST00000532708 DDX58O95786 925 aaKnown RBP15.24■□□□□ 0.03
TRAF3IP2-212ENST00000532708 KLHL34Q8N239 644 aa15.24■□□□□ 0.03
TRAF3IP2-212ENST00000532708 MAP3K2Q9Y2U5 619 aa15.24■□□□□ 0.03
TRAF3IP2-212ENST00000532708 ATP5J2-PTCD1G3V325 749 aa15.23■□□□□ 0.03
TRAF3IP2-212ENST00000532708 SERPINB2P05120 415 aa15.23■□□□□ 0.03
TRAF3IP2-212ENST00000532708 TCIRG1Q13488 830 aa15.23■□□□□ 0.03
TRAF3IP2-212ENST00000532708 KSR2Q6VAB6 950 aa15.23■□□□□ 0.03
TRAF3IP2-212ENST00000532708 ADCY9O60503 1353 aa15.22■□□□□ 0.03
TRAF3IP2-212ENST00000532708 RGL2O15211 777 aa15.22■□□□□ 0.03
TRAF3IP2-212ENST00000532708 BCAR3O75815 825 aa15.22■□□□□ 0.03
TRAF3IP2-212ENST00000532708 ZNF34Q8IZ26 560 aa15.22■□□□□ 0.03
TRAF3IP2-212ENST00000532708 CCDC24Q8N4L8 307 aa15.22■□□□□ 0.03
TRAF3IP2-212ENST00000532708 UBN2Q6ZU65 1347 aa15.22■□□□□ 0.03
TRAF3IP2-212ENST00000532708 ARFGEF2Q9Y6D5 1785 aa15.22■□□□□ 0.03
TRAF3IP2-212ENST00000532708 F6X3S4 739 aa15.22■□□□□ 0.03
TRAF3IP2-212ENST00000532708 MYD88Q99836 296 aa15.22■□□□□ 0.03
TRAF3IP2-212ENST00000532708 LRP5O75197 1615 aa15.21■□□□□ 0.03
TRAF3IP2-212ENST00000532708 CARMIL3Q8ND23 1372 aa15.21■□□□□ 0.03
TRAF3IP2-212ENST00000532708 ATP10DQ9P241 1426 aa15.21■□□□□ 0.03
TRAF3IP2-212ENST00000532708 AFDNP55196 1824 aaKnown RBP15.21■□□□□ 0.03
TRAF3IP2-212ENST00000532708 HSP90AB3PQ58FF7 597 aa15.2■□□□□ 0.02
TRAF3IP2-212ENST00000532708 SUSD4Q5VX71 490 aa15.2■□□□□ 0.02
TRAF3IP2-212ENST00000532708 NBPF5PQ86XG9 351 aaPredicted RBP15.2■□□□□ 0.02
TRAF3IP2-212ENST00000532708 METTL22Q9BUU2 404 aaPredicted RBP15.2■□□□□ 0.02
TRAF3IP2-212ENST00000532708 FHDC1Q9C0D6 1143 aaPredicted RBP15.2■□□□□ 0.02
TRAF3IP2-212ENST00000532708 GOLGB1Q14789 3259 aaKnown RBP15.2■□□□□ 0.02
TRAF3IP2-212ENST00000532708 NPHP1O15259 732 aa15.2■□□□□ 0.02
TRAF3IP2-212ENST00000532708 NOB1Q9ULX3 412 aaKnown RBP15.2■□□□□ 0.02
TRAF3IP2-212ENST00000532708 NLRP10Q86W26 655 aa15.19■□□□□ 0.02
TRAF3IP2-212ENST00000532708 DNAAF4Q8WXU2 420 aa15.19■□□□□ 0.02
TRAF3IP2-212ENST00000532708 ISCA1Q9BUE6 129 aa15.19■□□□□ 0.02
TRAF3IP2-212ENST00000532708 ANKRD36CQ5JPF3 1778 aa15.19■□□□□ 0.02
TRAF3IP2-212ENST00000532708 PRR5LQ6MZQ0 368 aa15.18■□□□□ 0.02
TRAF3IP2-212ENST00000532708 NUTM1Q86Y26 1132 aa15.18■□□□□ 0.02
TRAF3IP2-212ENST00000532708 CNBD1Q8NA66 436 aa15.18■□□□□ 0.02
TRAF3IP2-212ENST00000532708 SLC4A10Q6U841 1118 aa15.18■□□□□ 0.02
TRAF3IP2-212ENST00000532708 TPTE2Q6XPS3 522 aa15.18■□□□□ 0.02
TRAF3IP2-212ENST00000532708 FRAT1Q92837 279 aaPredicted RBP15.18■□□□□ 0.02
TRAF3IP2-212ENST00000532708 IGKV5-2P06315 115 aa15.17■□□□□ 0.02
TRAF3IP2-212ENST00000532708 GTF2E1P29083 439 aaPredicted RBP15.17■□□□□ 0.02
TRAF3IP2-212ENST00000532708 BRPF1P55201 1214 aaPredicted RBP15.17■□□□□ 0.02
TRAF3IP2-212ENST00000532708 NEXNQ0ZGT2 675 aa15.17■□□□□ 0.02
TRAF3IP2-212ENST00000532708 CWF19L2Q2TBE0 894 aaKnown RBP15.17■□□□□ 0.02
TRAF3IP2-212ENST00000532708 PARP10Q53GL7 1025 aa15.17■□□□□ 0.02
TRAF3IP2-212ENST00000532708 PTPRCP08575 1304 aa15.17■□□□□ 0.02
TRAF3IP2-212ENST00000532708 RTL5Q5HYW3 569 aaPredicted RBP15.16■□□□□ 0.02
TRAF3IP2-212ENST00000532708 PPP1R42Q7Z4L9 355 aa15.16■□□□□ 0.02
TRAF3IP2-212ENST00000532708 SYNE4Q8N205 404 aa15.16■□□□□ 0.02
TRAF3IP2-212ENST00000532708 SYT17Q9BSW7 474 aa15.16■□□□□ 0.02
TRAF3IP2-212ENST00000532708 UTP14AQ9BVJ6 771 aaKnown RBP15.16■□□□□ 0.02
TRAF3IP2-212ENST00000532708 GTF3C3Q9Y5Q9 886 aa15.16■□□□□ 0.02
TRAF3IP2-212ENST00000532708 NRXN2Q9P2S2 1712 aa15.16■□□□□ 0.02
TRAF3IP2-212ENST00000532708 NTSR2O95665 410 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms