RNA–Protein interactions for RNA: ENST00000532656.6

CTSB-226, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-226ENST00000532656 U2AF1Q01081 240 aaKnown RBP eCLIP22.94■■□□□ 1.26
CTSB-226ENST00000532656 PCNTO95613 3336 aa22.93■■□□□ 1.26
CTSB-226ENST00000532656 DICER1Q9UPY3 1922 aaKnown RBP22.93■■□□□ 1.26
CTSB-226ENST00000532656 ERFEQ4G0M1 354 aa22.93■■□□□ 1.26
CTSB-226ENST00000532656 RTF1Q92541 710 aaKnown RBP22.93■■□□□ 1.26
CTSB-226ENST00000532656 SLX4Q8IY92 1834 aa22.93■■□□□ 1.26
CTSB-226ENST00000532656 DPY19L2Q6NUT2 758 aa22.92■■□□□ 1.26
CTSB-226ENST00000532656 POTECB2RU33 542 aa22.91■■□□□ 1.26
CTSB-226ENST00000532656 PPP2R1AP30153 589 aa22.91■■□□□ 1.26
CTSB-226ENST00000532656 DCTN1Q14203 1278 aa22.91■■□□□ 1.26
CTSB-226ENST00000532656 PRPF40BQ6NWY9 871 aaKnown RBP22.91■■□□□ 1.26
CTSB-226ENST00000532656 CNKSR1Q969H4 720 aa22.91■■□□□ 1.26
CTSB-226ENST00000532656 SNRPA1P09661 255 aaKnown RBP22.9■■□□□ 1.26
CTSB-226ENST00000532656 SRGNP10124 158 aa22.9■■□□□ 1.26
CTSB-226ENST00000532656 STYK1Q6J9G0 422 aa22.9■■□□□ 1.26
CTSB-226ENST00000532656 TAOK3Q9H2K8 898 aa22.9■■□□□ 1.26
CTSB-226ENST00000532656 ARFGEF2Q9Y6D5 1785 aa22.89■■□□□ 1.26
CTSB-226ENST00000532656 LTBP3Q9NS15 1303 aa22.89■■□□□ 1.26
CTSB-226ENST00000532656 NBPF5PQ86XG9 351 aaPredicted RBP22.89■■□□□ 1.25
CTSB-226ENST00000532656 MASTLQ96GX5 879 aa22.89■■□□□ 1.25
CTSB-226ENST00000532656 CLEC4GQ6UXB4 293 aa22.87■■□□□ 1.25
CTSB-226ENST00000532656 ZNF652Q9Y2D9 606 aa22.87■■□□□ 1.25
CTSB-226ENST00000532656 COL13A1Q5TAT6 717 aaPredicted RBP22.86■■□□□ 1.25
CTSB-226ENST00000532656 NBPF26B4DH59 902 aa22.85■■□□□ 1.25
CTSB-226ENST00000532656 DDNO94850 711 aaPredicted RBP22.85■■□□□ 1.25
CTSB-226ENST00000532656 SOGA3Q5TF21 947 aa22.85■■□□□ 1.25
CTSB-226ENST00000532656 NBPF10Q6P3W6 841 aaKnown RBP22.85■■□□□ 1.25
CTSB-226ENST00000532656 NBPF15Q8N660 670 aa22.85■■□□□ 1.25
CTSB-226ENST00000532656 FAM177BA6PVY3 158 aa22.84■■□□□ 1.25
CTSB-226ENST00000532656 NIP7Q9Y221 180 aaKnown RBP eCLIP22.84■■□□□ 1.25
CTSB-226ENST00000532656 HTATSF1O43719 755 aaKnown RBP22.83■■□□□ 1.25
CTSB-226ENST00000532656 MIS18AQ9NYP9 233 aa22.83■■□□□ 1.25
CTSB-226ENST00000532656 POTEIP0CG38 1075 aa22.82■■□□□ 1.24
CTSB-226ENST00000532656 POTEJP0CG39 1038 aa22.82■■□□□ 1.24
CTSB-226ENST00000532656 NPR1P16066 1061 aa22.82■■□□□ 1.24
CTSB-226ENST00000532656 C7orf43Q8WVR3 580 aa22.82■■□□□ 1.24
CTSB-226ENST00000532656 TAF7Q15545 349 aaPredicted RBP22.81■■□□□ 1.24
CTSB-226ENST00000532656 CCDC93Q567U6 631 aa22.81■■□□□ 1.24
CTSB-226ENST00000532656 TPTE2Q6XPS3 522 aa22.81■■□□□ 1.24
CTSB-226ENST00000532656 LAMB4A4D0S4 1761 aa22.81■■□□□ 1.24
CTSB-226ENST00000532656 HLFQ16534 295 aa22.8■■□□□ 1.24
CTSB-226ENST00000532656 CHADLQ6NUI6 762 aa22.79■■□□□ 1.24
CTSB-226ENST00000532656 OLFM4Q6UX06 510 aa22.79■■□□□ 1.24
CTSB-226ENST00000532656 DLG5Q8TDM6 1919 aa22.78■■□□□ 1.24
CTSB-226ENST00000532656 KLRG2A4D1S0 409 aaPredicted RBP22.78■■□□□ 1.24
CTSB-226ENST00000532656 HSPA1AP0DMV8 641 aaKnown RBP22.78■■□□□ 1.24
CTSB-226ENST00000532656 HSPA1BP0DMV9 641 aaKnown RBP22.78■■□□□ 1.24
CTSB-226ENST00000532656 NGEFQ8N5V2 710 aa22.78■■□□□ 1.24
CTSB-226ENST00000532656 RGL2O15211 777 aa22.77■■□□□ 1.24
CTSB-226ENST00000532656 FKBP4Q02790 459 aaKnown RBP eCLIP22.77■■□□□ 1.24
CTSB-226ENST00000532656 ZNF277Q9NRM2 450 aaPredicted RBP22.77■■□□□ 1.24
CTSB-226ENST00000532656 KDM3BQ7LBC6 1761 aa22.76■■□□□ 1.23
CTSB-226ENST00000532656 GTF2E1P29083 439 aaPredicted RBP22.76■■□□□ 1.23
CTSB-226ENST00000532656 NEFMP07197 916 aa22.75■■□□□ 1.23
CTSB-226ENST00000532656 ZNF541Q9H0D2 1346 aa22.75■■□□□ 1.23
CTSB-226ENST00000532656 IQCA1LA6NCM1 817 aa22.74■■□□□ 1.23
CTSB-226ENST00000532656 TNS4Q8IZW8 715 aa22.74■■□□□ 1.23
CTSB-226ENST00000532656 L3MBTL3Q96JM7 780 aaPredicted RBP22.74■■□□□ 1.23
CTSB-226ENST00000532656 CREBZFQ9NS37 354 aa22.74■■□□□ 1.23
CTSB-226ENST00000532656 ABCC12Q96J65 1359 aa22.74■■□□□ 1.23
CTSB-226ENST00000532656 SCN4AP35499 1836 aa22.73■■□□□ 1.23
CTSB-226ENST00000532656 CAPN15O75808 1086 aa22.73■■□□□ 1.23
CTSB-226ENST00000532656 NUTM1Q86Y26 1132 aa22.73■■□□□ 1.23
CTSB-226ENST00000532656 RTKN2Q8IZC4 609 aa22.73■■□□□ 1.23
CTSB-226ENST00000532656 THUMPD2Q9BTF0 503 aaKnown RBP22.73■■□□□ 1.23
CTSB-226ENST00000532656 TAF1DQ9H5J8 278 aaPredicted RBP22.73■■□□□ 1.23
CTSB-226ENST00000532656 MKRN1Q9UHC7 482 aaKnown RBP22.73■■□□□ 1.23
CTSB-226ENST00000532656 RRP7AQ9Y3A4 280 aaKnown RBP22.73■■□□□ 1.23
CTSB-226ENST00000532656 PNISRQ8TF01 805 aaKnown RBP22.72■■□□□ 1.23
CTSB-226ENST00000532656 NUP98P52948 1817 aa22.72■■□□□ 1.23
CTSB-226ENST00000532656 ALDH1B1P30837 517 aa22.71■■□□□ 1.23
CTSB-226ENST00000532656 EIF4A1P60842 406 aaKnown RBP22.71■■□□□ 1.23
CTSB-226ENST00000532656 TTLL7Q6ZT98 887 aa22.71■■□□□ 1.23
CTSB-226ENST00000532656 LDHDQ86WU2 507 aa22.71■■□□□ 1.23
CTSB-226ENST00000532656 PLEKHF1Q96S99 279 aa22.71■■□□□ 1.23
CTSB-226ENST00000532656 NYXQ9GZU5 481 aa22.71■■□□□ 1.23
CTSB-226ENST00000532656 MAP3K15Q6ZN16 1313 aa22.71■■□□□ 1.23
CTSB-226ENST00000532656 ERVV-1B6SEH8 477 aa22.7■■□□□ 1.22
CTSB-226ENST00000532656 MYL6BP14649 208 aa22.7■■□□□ 1.22
CTSB-226ENST00000532656 IARSP41252 1262 aaKnown RBP22.7■■□□□ 1.22
CTSB-226ENST00000532656 NFE2L2Q16236 605 aa22.7■■□□□ 1.22
CTSB-226ENST00000532656 EAPPQ56P03 285 aaPredicted RBP22.7■■□□□ 1.22
CTSB-226ENST00000532656 SYNE4Q8N205 404 aa22.7■■□□□ 1.22
CTSB-226ENST00000532656 GPTP24298 496 aa22.69■■□□□ 1.22
CTSB-226ENST00000532656 KIF6Q6ZMV9 814 aa22.69■■□□□ 1.22
CTSB-226ENST00000532656 ZBTB3Q9H5J0 574 aa22.69■■□□□ 1.22
CTSB-226ENST00000532656 PASKQ96RG2 1323 aa22.68■■□□□ 1.22
CTSB-226ENST00000532656 CRY2Q49AN0 593 aa22.68■■□□□ 1.22
CTSB-226ENST00000532656 HACL1Q9UJ83 578 aa22.68■■□□□ 1.22
CTSB-226ENST00000532656 SNED1Q8TER0 1413 aa22.67■■□□□ 1.22
CTSB-226ENST00000532656 RNF123Q5XPI4 1314 aa22.67■■□□□ 1.22
CTSB-226ENST00000532656 UBN2Q6ZU65 1347 aa22.67■■□□□ 1.22
CTSB-226ENST00000532656 MAPK8IP3Q9UPT6 1336 aa22.66■■□□□ 1.22
CTSB-226ENST00000532656 FZD9O00144 591 aa22.66■■□□□ 1.22
CTSB-226ENST00000532656 RPGRQ92834 1020 aaKnown RBP22.66■■□□□ 1.22
CTSB-226ENST00000532656 CLEC11AQ9Y240 323 aa22.66■■□□□ 1.22
CTSB-226ENST00000532656 CNTNAP1P78357 1384 aa22.65■■□□□ 1.22
CTSB-226ENST00000532656 EPHX2P34913 555 aa22.65■■□□□ 1.22
CTSB-226ENST00000532656 PSMD1Q99460 953 aa22.65■■□□□ 1.22
CTSB-226ENST00000532656 ADAMTSL1Q8N6G6 1762 aa22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 273.7 ms