RNA–Protein interactions for RNA: ENST00000532449.5

CHEK1-213, Transcript of checkpoint kinase 1, humanhuman

TSL 2 BASIC

Gene CHEK1, Length 4,051 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-213ENST00000532449 NCOA5Q9HCD5 579 aaKnown RBP12.72□□□□□ -0.37
CHEK1-213ENST00000532449 PTH1RQ03431 593 aa12.72□□□□□ -0.37
CHEK1-213ENST00000532449 AOPEPQ8N6M6 819 aa12.72□□□□□ -0.37
CHEK1-213ENST00000532449 KDM5DQ9BY66 1539 aa12.72□□□□□ -0.37
CHEK1-213ENST00000532449 GLRX3O76003 335 aaKnown RBP12.72□□□□□ -0.37
CHEK1-213ENST00000532449 RXRAP19793 462 aa12.72□□□□□ -0.37
CHEK1-213ENST00000532449 FAM193AP78312 1265 aa12.71□□□□□ -0.37
CHEK1-213ENST00000532449 MAP3K2Q9Y2U5 619 aa12.71□□□□□ -0.37
CHEK1-213ENST00000532449 ACEP12821 1306 aa12.71□□□□□ -0.37
CHEK1-213ENST00000532449 IL13P35225 146 aa12.71□□□□□ -0.37
CHEK1-213ENST00000532449 NMIQ13287 307 aaPredicted RBP12.71□□□□□ -0.37
CHEK1-213ENST00000532449 MARCKSP29966 332 aaPredicted RBP12.71□□□□□ -0.38
CHEK1-213ENST00000532449 FAM200AQ8TCP9 573 aa12.71□□□□□ -0.38
CHEK1-213ENST00000532449 DNAAF4Q8WXU2 420 aa12.71□□□□□ -0.38
CHEK1-213ENST00000532449 CCDC34Q96HJ3 373 aa12.71□□□□□ -0.38
CHEK1-213ENST00000532449 ELF2Q15723 593 aa12.7□□□□□ -0.38
CHEK1-213ENST00000532449 HSP90AB4PQ58FF6 505 aa12.7□□□□□ -0.38
CHEK1-213ENST00000532449 CCAR1Q8IX12 1150 aaKnown RBP12.7□□□□□ -0.38
CHEK1-213ENST00000532449 LRRC59Q96AG4 307 aaKnown RBP12.7□□□□□ -0.38
CHEK1-213ENST00000532449 EID1Q9Y6B2 187 aa12.7□□□□□ -0.38
CHEK1-213ENST00000532449 KAT6BQ8WYB5 2073 aa12.7□□□□□ -0.38
CHEK1-213ENST00000532449 PLCH2O75038 1416 aa12.7□□□□□ -0.38
CHEK1-213ENST00000532449 MCM5P33992 734 aa12.7□□□□□ -0.38
CHEK1-213ENST00000532449 ESCO1Q5FWF5 840 aa12.7□□□□□ -0.38
CHEK1-213ENST00000532449 RALYLQ86SE5 291 aaKnown RBP12.7□□□□□ -0.38
CHEK1-213ENST00000532449 PRIMPOLQ96LW4 560 aa12.7□□□□□ -0.38
CHEK1-213ENST00000532449 CD109Q6YHK3 1445 aa12.7□□□□□ -0.38
CHEK1-213ENST00000532449 UBXN4Q92575 508 aa12.7□□□□□ -0.38
CHEK1-213ENST00000532449 SRRTQ9BXP5 876 aaKnown RBP12.7□□□□□ -0.38
CHEK1-213ENST00000532449 PPP6R1Q9UPN7 881 aa12.7□□□□□ -0.38
CHEK1-213ENST00000532449 ZNF500O60304 480 aaPredicted RBP12.69□□□□□ -0.38
CHEK1-213ENST00000532449 TTC5Q8N0Z6 440 aa12.69□□□□□ -0.38
CHEK1-213ENST00000532449 ECHDC1Q9NTX5 307 aa12.69□□□□□ -0.38
CHEK1-213ENST00000532449 DNAI1Q9UI46 699 aa12.69□□□□□ -0.38
CHEK1-213ENST00000532449 UHRF1BP1LA0JNW5 1464 aa12.69□□□□□ -0.38
CHEK1-213ENST00000532449 KCNQ3O43525 872 aa12.69□□□□□ -0.38
CHEK1-213ENST00000532449 ATP8B2P98198 1209 aa12.69□□□□□ -0.38
CHEK1-213ENST00000532449 GPIHBP1Q8IV16 184 aa12.69□□□□□ -0.38
CHEK1-213ENST00000532449 CEP57L1Q8IYX8 460 aa12.69□□□□□ -0.38
CHEK1-213ENST00000532449 IL25Q9H293 177 aa12.69□□□□□ -0.38
CHEK1-213ENST00000532449 CBX8Q9HC52 389 aa12.69□□□□□ -0.38
CHEK1-213ENST00000532449 SYT10Q6XYQ8 523 aa12.69□□□□□ -0.38
CHEK1-213ENST00000532449 RUFY3Q7L099 469 aa12.69□□□□□ -0.38
CHEK1-213ENST00000532449 MYD88Q99836 296 aa12.69□□□□□ -0.38
CHEK1-213ENST00000532449 SLC52A1Q9NWF4 448 aa12.69□□□□□ -0.38
CHEK1-213ENST00000532449 ITSN2Q9NZM3 1697 aa12.69□□□□□ -0.38
CHEK1-213ENST00000532449 A0A1B0GVL5 298 aa12.68□□□□□ -0.38
CHEK1-213ENST00000532449 GOLIM4O00461 696 aa12.68□□□□□ -0.38
CHEK1-213ENST00000532449 SFPQP23246 707 aaKnown RBP eCLIP12.68□□□□□ -0.38
CHEK1-213ENST00000532449 FANCAO15360 1455 aa12.68□□□□□ -0.38
CHEK1-213ENST00000532449 PATL2C9JE40 543 aaKnown RBP12.68□□□□□ -0.38
CHEK1-213ENST00000532449 PHACTR2O75167 634 aa12.68□□□□□ -0.38
CHEK1-213ENST00000532449 TTC6Q86TZ1 520 aa12.68□□□□□ -0.38
CHEK1-213ENST00000532449 CCDC69A6NI79 296 aa12.68□□□□□ -0.38
CHEK1-213ENST00000532449 ME3Q16798 604 aa12.68□□□□□ -0.38
CHEK1-213ENST00000532449 KIF18AQ8NI77 898 aa12.68□□□□□ -0.38
CHEK1-213ENST00000532449 RTL1A6NKG5 1358 aa12.68□□□□□ -0.38
CHEK1-213ENST00000532449 GOLGA8FQ08AF8 430 aa12.67□□□□□ -0.38
CHEK1-213ENST00000532449 GOLGA8DPQ0D2H9 430 aa12.67□□□□□ -0.38
CHEK1-213ENST00000532449 EYA1Q99502 592 aa12.67□□□□□ -0.38
CHEK1-213ENST00000532449 ABCC4O15439 1325 aa12.67□□□□□ -0.38
CHEK1-213ENST00000532449 UBE3BQ7Z3V4 1068 aa12.67□□□□□ -0.38
CHEK1-213ENST00000532449 DDX58O95786 925 aaKnown RBP12.67□□□□□ -0.38
CHEK1-213ENST00000532449 APOBRQ0VD83 1088 aa12.67□□□□□ -0.38
CHEK1-213ENST00000532449 SLFNL1Q499Z3 407 aa12.67□□□□□ -0.38
CHEK1-213ENST00000532449 PCMTD1Q96MG8 357 aaPredicted RBP12.67□□□□□ -0.38
CHEK1-213ENST00000532449 SEC62Q99442 399 aaKnown RBP12.67□□□□□ -0.38
CHEK1-213ENST00000532449 SOS1Q07889 1333 aaPredicted RBP12.67□□□□□ -0.38
CHEK1-213ENST00000532449 NR1I2O75469 434 aa12.67□□□□□ -0.38
CHEK1-213ENST00000532449 PTPRCP08575 1304 aa12.66□□□□□ -0.38
CHEK1-213ENST00000532449 Q6ZUG5 572 aa12.66□□□□□ -0.38
CHEK1-213ENST00000532449 SCAND2PQ9GZW5 306 aaPredicted RBP12.66□□□□□ -0.38
CHEK1-213ENST00000532449 RABEP2Q9H5N1 569 aa12.66□□□□□ -0.38
CHEK1-213ENST00000532449 NPC1L1Q9UHC9 1359 aa12.66□□□□□ -0.38
CHEK1-213ENST00000532449 HS1BP3Q53T59 392 aa12.66□□□□□ -0.38
CHEK1-213ENST00000532449 CDC42BPAQ5VT25 1732 aa12.66□□□□□ -0.38
CHEK1-213ENST00000532449 CREB3L3Q68CJ9 461 aa12.66□□□□□ -0.38
CHEK1-213ENST00000532449 ZNF215Q9UL58 517 aaPredicted RBP12.66□□□□□ -0.38
CHEK1-213ENST00000532449 TPM3P06753 285 aa12.66□□□□□ -0.38
CHEK1-213ENST00000532449 NAT10Q9H0A0 1025 aaKnown RBP12.66□□□□□ -0.38
CHEK1-213ENST00000532449 LGR6Q9HBX8 967 aa12.66□□□□□ -0.38
CHEK1-213ENST00000532449 DNA2P51530 1060 aa12.65□□□□□ -0.38
CHEK1-213ENST00000532449 SNW1Q13573 536 aaKnown RBP12.65□□□□□ -0.38
CHEK1-213ENST00000532449 FKBP15Q5T1M5 1219 aa12.65□□□□□ -0.38
CHEK1-213ENST00000532449 ARGLU1Q9NWB6 273 aaPredicted RBP12.65□□□□□ -0.38
CHEK1-213ENST00000532449 CHGBP05060 677 aa12.65□□□□□ -0.38
CHEK1-213ENST00000532449 TRDNQ13061 729 aa12.65□□□□□ -0.38
CHEK1-213ENST00000532449 SLC4A8Q2Y0W8 1093 aa12.65□□□□□ -0.38
CHEK1-213ENST00000532449 CERS3Q8IU89 383 aa12.65□□□□□ -0.38
CHEK1-213ENST00000532449 ZSCAN31Q96LW9 406 aaPredicted RBP12.65□□□□□ -0.38
CHEK1-213ENST00000532449 MAP3K19Q56UN5 1328 aa12.65□□□□□ -0.38
CHEK1-213ENST00000532449 TRIM29Q14134 588 aa12.65□□□□□ -0.38
CHEK1-213ENST00000532449 SPECC1Q5M775 1068 aa12.65□□□□□ -0.38
CHEK1-213ENST00000532449 SMAP1Q8IYB5 467 aaPredicted RBP12.65□□□□□ -0.38
CHEK1-213ENST00000532449 GOLGA6L1Q8N7Z2 621 aa12.65□□□□□ -0.38
CHEK1-213ENST00000532449 NUP133Q8WUM0 1156 aa12.65□□□□□ -0.38
CHEK1-213ENST00000532449 HINFPQ9BQA5 517 aa12.65□□□□□ -0.38
CHEK1-213ENST00000532449 SAMD9LQ8IVG5 1584 aa12.64□□□□□ -0.39
CHEK1-213ENST00000532449 CCDC66A2RUB6 948 aa12.64□□□□□ -0.39
CHEK1-213ENST00000532449 IFNKQ9P0W0 207 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms