RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 NBPF6Q5VWK0 638 aa17.84■□□□□ 0.45
NXF1-213ENST00000532297 NBPF4Q96M43 638 aa17.84■□□□□ 0.45
NXF1-213ENST00000532297 SRGAP3O43295 1099 aa17.83■□□□□ 0.45
NXF1-213ENST00000532297 U2AF2P26368 475 aaKnown RBP eCLIP17.83■□□□□ 0.445e-10■■■□□ 17.1
NXF1-213ENST00000532297 SRCIN1Q9C0H9 1055 aa17.83■□□□□ 0.44
NXF1-213ENST00000532297 SPG7Q9UQ90 795 aa17.83■□□□□ 0.44
NXF1-213ENST00000532297 MPRIPQ6WCQ1 1025 aa17.82■□□□□ 0.44
NXF1-213ENST00000532297 KIAA1524Q8TCG1 905 aa17.82■□□□□ 0.44
NXF1-213ENST00000532297 CNPY2Q9Y2B0 182 aa17.82■□□□□ 0.44
NXF1-213ENST00000532297 LTN1O94822 1766 aa17.82■□□□□ 0.44
NXF1-213ENST00000532297 PI4KAP2A4QPH2 592 aa17.82■□□□□ 0.44
NXF1-213ENST00000532297 ANAPC15P60006 121 aa17.82■□□□□ 0.44
NXF1-213ENST00000532297 PI4KAP1Q8N8J0 262 aa17.82■□□□□ 0.44
NXF1-213ENST00000532297 PYCARDQ9ULZ3 195 aa17.81■□□□□ 0.44
NXF1-213ENST00000532297 PA2G4Q9UQ80 394 aaKnown RBP17.81■□□□□ 0.44
NXF1-213ENST00000532297 IGSF3O75054 1194 aa17.8■□□□□ 0.44
NXF1-213ENST00000532297 PROSER3Q2NL68 480 aa17.8■□□□□ 0.44
NXF1-213ENST00000532297 CWC27Q6UX04 472 aaKnown RBP17.8■□□□□ 0.44
NXF1-213ENST00000532297 RASEFQ8IZ41 740 aa17.8■□□□□ 0.44
NXF1-213ENST00000532297 TMEM87AQ8NBN3 555 aa17.8■□□□□ 0.44
NXF1-213ENST00000532297 COL9A3Q14050 684 aaPredicted RBP17.8■□□□□ 0.44
NXF1-213ENST00000532297 PI4K2BQ8TCG2 481 aa17.8■□□□□ 0.44
NXF1-213ENST00000532297 RHPN1Q8TCX5 695 aa17.8■□□□□ 0.44
NXF1-213ENST00000532297 ANKRD7Q92527 254 aa17.8■□□□□ 0.44
NXF1-213ENST00000532297 KCNF1Q9H3M0 494 aa17.8■□□□□ 0.44
NXF1-213ENST00000532297 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.8■□□□□ 0.44
NXF1-213ENST00000532297 HTATSF1O43719 755 aaKnown RBP17.79■□□□□ 0.44
NXF1-213ENST00000532297 SPC24Q8NBT2 197 aa17.79■□□□□ 0.44
NXF1-213ENST00000532297 UBE2HP62256 183 aa17.79■□□□□ 0.44
NXF1-213ENST00000532297 SSH3Q8TE77 659 aa17.79■□□□□ 0.44
NXF1-213ENST00000532297 TBX22Q9Y458 520 aa17.79■□□□□ 0.44
NXF1-213ENST00000532297 AP5Z1O43299 807 aa17.78■□□□□ 0.44
NXF1-213ENST00000532297 LARGE1O95461 756 aa17.78■□□□□ 0.44
NXF1-213ENST00000532297 GIMAP6Q6P9H5 292 aa17.78■□□□□ 0.44
NXF1-213ENST00000532297 STAP2Q9UGK3 403 aa17.78■□□□□ 0.44
NXF1-213ENST00000532297 RPAP1Q9BWH6 1393 aaPredicted RBP17.78■□□□□ 0.44
NXF1-213ENST00000532297 EIF4A1P60842 406 aaKnown RBP17.77■□□□□ 0.44
NXF1-213ENST00000532297 FGD1P98174 961 aa17.77■□□□□ 0.44
NXF1-213ENST00000532297 CWF19L2Q2TBE0 894 aaKnown RBP17.77■□□□□ 0.43
NXF1-213ENST00000532297 CTIFO43310 598 aaKnown RBP17.76■□□□□ 0.43
NXF1-213ENST00000532297 FIBPO43427 364 aa17.76■□□□□ 0.43
NXF1-213ENST00000532297 TPM3P06753 285 aa17.76■□□□□ 0.43
NXF1-213ENST00000532297 OS9Q13438 667 aaPredicted RBP17.76■□□□□ 0.43
NXF1-213ENST00000532297 LMOD2Q6P5Q4 547 aa17.76■□□□□ 0.43
NXF1-213ENST00000532297 PXDNQ92626 1479 aa17.76■□□□□ 0.43
NXF1-213ENST00000532297 ZSCAN22P10073 491 aaPredicted RBP17.76■□□□□ 0.43
NXF1-213ENST00000532297 SNX14Q9Y5W7 946 aa17.76■□□□□ 0.43
NXF1-213ENST00000532297 BEND3Q5T5X7 828 aa17.75■□□□□ 0.43
NXF1-213ENST00000532297 N4BP2Q86UW6 1770 aaPredicted RBP17.75■□□□□ 0.43
NXF1-213ENST00000532297 ADCY9O60503 1353 aa17.75■□□□□ 0.43
NXF1-213ENST00000532297 GOLGA6L6A8MZA4 724 aa17.75■□□□□ 0.43
NXF1-213ENST00000532297 ZNF530Q6P9A1 599 aaPredicted RBP17.75■□□□□ 0.43
NXF1-213ENST00000532297 FUCA2Q9BTY2 467 aa17.75■□□□□ 0.43
NXF1-213ENST00000532297 POLA2Q14181 598 aa17.74■□□□□ 0.43
NXF1-213ENST00000532297 DNAAF4Q8WXU2 420 aa17.74■□□□□ 0.43
NXF1-213ENST00000532297 FEZ1Q99689 392 aa17.74■□□□□ 0.43
NXF1-213ENST00000532297 ARHGAP23Q9P227 1491 aa17.74■□□□□ 0.43
NXF1-213ENST00000532297 HSPA4P34932 840 aa17.74■□□□□ 0.43
NXF1-213ENST00000532297 AK2P54819 239 aa17.74■□□□□ 0.43
NXF1-213ENST00000532297 PTH1RQ03431 593 aa17.74■□□□□ 0.43
NXF1-213ENST00000532297 CACNA1FO60840 1977 aa17.74■□□□□ 0.43
NXF1-213ENST00000532297 SLIT1O75093 1534 aa17.74■□□□□ 0.43
NXF1-213ENST00000532297 PHF8Q9UPP1 1060 aa17.74■□□□□ 0.43
NXF1-213ENST00000532297 BTBD11A6QL63 1104 aa17.73■□□□□ 0.43
NXF1-213ENST00000532297 SGSM2O43147 1006 aa17.73■□□□□ 0.43
NXF1-213ENST00000532297 ADCK5Q3MIX3 580 aa17.73■□□□□ 0.43
NXF1-213ENST00000532297 ESCO1Q5FWF5 840 aa17.73■□□□□ 0.43
NXF1-213ENST00000532297 ZNF771Q7L3S4 317 aaPredicted RBP17.73■□□□□ 0.43
NXF1-213ENST00000532297 LSG1Q9H089 658 aaKnown RBP17.73■□□□□ 0.43
NXF1-213ENST00000532297 STX6O43752 255 aa17.73■□□□□ 0.43
NXF1-213ENST00000532297 AIMP1Q12904 312 aaKnown RBP17.73■□□□□ 0.43
NXF1-213ENST00000532297 RUFY3Q7L099 469 aa17.73■□□□□ 0.43
NXF1-213ENST00000532297 OGFRQ9NZT2 677 aa17.73■□□□□ 0.43
NXF1-213ENST00000532297 SYT1P21579 422 aa17.72■□□□□ 0.43
NXF1-213ENST00000532297 KLHDC4Q8TBB5 520 aa17.72■□□□□ 0.43
NXF1-213ENST00000532297 MAP3K2Q9Y2U5 619 aa17.72■□□□□ 0.43
NXF1-213ENST00000532297 RAD50Q92878 1312 aa17.72■□□□□ 0.43
NXF1-213ENST00000532297 FER1L4A9Z1Z3 1794 aa17.72■□□□□ 0.43
NXF1-213ENST00000532297 PIP4K2AP48426 406 aaPredicted RBP17.72■□□□□ 0.43
NXF1-213ENST00000532297 NCBP1Q09161 790 aaKnown RBP17.72■□□□□ 0.43
NXF1-213ENST00000532297 TEFQ10587 303 aa17.72■□□□□ 0.43
NXF1-213ENST00000532297 CEMIPQ8WUJ3 1361 aa17.71■□□□□ 0.43
NXF1-213ENST00000532297 IL17RAQ96F46 866 aa17.71■□□□□ 0.43
NXF1-213ENST00000532297 TCEANC2Q96MN5 208 aa17.71■□□□□ 0.43
NXF1-213ENST00000532297 PXDNLA1KZ92 1463 aa17.71■□□□□ 0.43
NXF1-213ENST00000532297 F13A1P00488 732 aa17.71■□□□□ 0.43
NXF1-213ENST00000532297 CASTP20810 708 aaKnown RBP17.71■□□□□ 0.43
NXF1-213ENST00000532297 PTGS1P23219 599 aa17.71■□□□□ 0.43
NXF1-213ENST00000532297 SIL1Q9H173 461 aa17.71■□□□□ 0.43
NXF1-213ENST00000532297 AOX1Q06278 1338 aa17.71■□□□□ 0.43
NXF1-213ENST00000532297 BBXQ8WY36 941 aaPredicted RBP17.7■□□□□ 0.42
NXF1-213ENST00000532297 KIF1BPQ96EK5 621 aa17.7■□□□□ 0.42
NXF1-213ENST00000532297 TLR7Q9NYK1 1049 aaKnown RBP17.7■□□□□ 0.42
NXF1-213ENST00000532297 ATP6V1DQ9Y5K8 247 aa17.7■□□□□ 0.42
NXF1-213ENST00000532297 PRPF40BQ6NWY9 871 aaKnown RBP17.7■□□□□ 0.42
NXF1-213ENST00000532297 CCDC83Q8IWF9 413 aa17.7■□□□□ 0.42
NXF1-213ENST00000532297 THEMISQ8N1K5 641 aaPredicted RBP17.7■□□□□ 0.42
NXF1-213ENST00000532297 BABAM1Q9NWV8 329 aa17.7■□□□□ 0.42
NXF1-213ENST00000532297 IP6K1Q92551 441 aa17.69■□□□□ 0.42
NXF1-213ENST00000532297 KDM3BQ7LBC6 1761 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms