RNA–Protein interactions for RNA: ENST00000531914.5

MS4A6A-215, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 2

Gene MS4A6A, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-215ENST00000531914 CASZ1Q86V15 1759 aa12.84□□□□□ -0.35
MS4A6A-215ENST00000531914 KDRP35968 1356 aa12.83□□□□□ -0.36
MS4A6A-215ENST00000531914 PHKG2P15735 406 aa12.83□□□□□ -0.36
MS4A6A-215ENST00000531914 SULT6B1Q6IMI4 303 aa12.83□□□□□ -0.36
MS4A6A-215ENST00000531914 SLC15A2Q16348 729 aa12.82□□□□□ -0.36
MS4A6A-215ENST00000531914 COL3A1P02461 1466 aaPredicted RBP12.82□□□□□ -0.36
MS4A6A-215ENST00000531914 PLEKHG2Q9H7P9 1386 aa12.81□□□□□ -0.36
MS4A6A-215ENST00000531914 BCAMP50895 628 aa12.81□□□□□ -0.36
MS4A6A-215ENST00000531914 ZNF827Q17R98 1081 aa12.81□□□□□ -0.36
MS4A6A-215ENST00000531914 MPRIPQ6WCQ1 1025 aa12.81□□□□□ -0.36
MS4A6A-215ENST00000531914 IFNL2Q8IZJ0 200 aa12.81□□□□□ -0.36
MS4A6A-215ENST00000531914 PIGBQ92521 554 aa12.81□□□□□ -0.36
MS4A6A-215ENST00000531914 DIAPH1O60610 1272 aaKnown RBP12.8□□□□□ -0.36
MS4A6A-215ENST00000531914 RGS20O76081 388 aa12.8□□□□□ -0.36
MS4A6A-215ENST00000531914 NBR1Q14596 966 aa12.8□□□□□ -0.36
MS4A6A-215ENST00000531914 SLC27A3Q5K4L6 730 aa12.8□□□□□ -0.36
MS4A6A-215ENST00000531914 ZFRQ96KR1 1074 aaKnown RBP12.8□□□□□ -0.36
MS4A6A-215ENST00000531914 STK32BQ9NY57 414 aa12.8□□□□□ -0.36
MS4A6A-215ENST00000531914 SEPT9Q9UHD8 586 aaPredicted RBP12.8□□□□□ -0.36
MS4A6A-215ENST00000531914 SOWAHBA6NEL2 793 aa12.79□□□□□ -0.36
MS4A6A-215ENST00000531914 TRIM6-TRIM34B2RNG4 842 aa12.79□□□□□ -0.36
MS4A6A-215ENST00000531914 MAP3K7O43318 606 aa12.79□□□□□ -0.36
MS4A6A-215ENST00000531914 PLEKHO1Q53GL0 409 aaPredicted RBP12.79□□□□□ -0.36
MS4A6A-215ENST00000531914 TUBGCP6Q96RT7 1819 aa12.78□□□□□ -0.36
MS4A6A-215ENST00000531914 HMOX1P09601 288 aa12.78□□□□□ -0.36
MS4A6A-215ENST00000531914 PPP2R1AP30153 589 aa12.78□□□□□ -0.36
MS4A6A-215ENST00000531914 AMOTQ4VCS5 1084 aa12.78□□□□□ -0.36
MS4A6A-215ENST00000531914 WDR70Q9NW82 654 aa12.78□□□□□ -0.36
MS4A6A-215ENST00000531914 TAF1LQ8IZX4 1826 aa12.78□□□□□ -0.36
MS4A6A-215ENST00000531914 KDM6AO15550 1401 aaPredicted RBP12.78□□□□□ -0.36
MS4A6A-215ENST00000531914 SPDYE16A6NNV3 312 aaPredicted RBP12.77□□□□□ -0.37
MS4A6A-215ENST00000531914 PDIA6Q15084 440 aa12.77□□□□□ -0.37
MS4A6A-215ENST00000531914 ZNF530Q6P9A1 599 aaPredicted RBP12.77□□□□□ -0.37
MS4A6A-215ENST00000531914 NYAP1Q6ZVC0 841 aa12.77□□□□□ -0.37
MS4A6A-215ENST00000531914 CCNL1Q9UK58 526 aaPredicted RBP12.77□□□□□ -0.37
MS4A6A-215ENST00000531914 PALLDQ8WX93 1383 aa12.77□□□□□ -0.37
MS4A6A-215ENST00000531914 QSER1Q2KHR3 1735 aa12.76□□□□□ -0.37
MS4A6A-215ENST00000531914 ZBTB7AO95365 584 aa12.76□□□□□ -0.37
MS4A6A-215ENST00000531914 DCAF5Q96JK2 942 aa12.76□□□□□ -0.37
MS4A6A-215ENST00000531914 ASAP1Q9ULH1 1129 aa12.76□□□□□ -0.37
MS4A6A-215ENST00000531914 C5P01031 1676 aa12.76□□□□□ -0.37
MS4A6A-215ENST00000531914 VIRMAQ69YN4 1812 aaKnown RBP12.76□□□□□ -0.37
MS4A6A-215ENST00000531914 ERVV-2B6SEH9 535 aa12.75□□□□□ -0.37
MS4A6A-215ENST00000531914 PACS2Q86VP3 889 aa12.75□□□□□ -0.37
MS4A6A-215ENST00000531914 CFAP44Q96MT7 982 aa12.75□□□□□ -0.37
MS4A6A-215ENST00000531914 SPON1Q9HCB6 807 aa12.75□□□□□ -0.37
MS4A6A-215ENST00000531914 ATG3Q9NT62 314 aa12.75□□□□□ -0.37
MS4A6A-215ENST00000531914 TMOD3Q9NYL9 352 aa12.75□□□□□ -0.37
MS4A6A-215ENST00000531914 SCN11AQ9UI33 1791 aa12.75□□□□□ -0.37
MS4A6A-215ENST00000531914 PNPLA7Q6ZV29 1317 aa12.74□□□□□ -0.37
MS4A6A-215ENST00000531914 HSP90AB1P08238 724 aaKnown RBP12.74□□□□□ -0.37
MS4A6A-215ENST00000531914 E2F4Q16254 413 aa12.74□□□□□ -0.37
MS4A6A-215ENST00000531914 MTHFSDQ2M296 383 aaKnown RBP12.74□□□□□ -0.37
MS4A6A-215ENST00000531914 SMARCC1Q92922 1105 aaPredicted RBP12.74□□□□□ -0.37
MS4A6A-215ENST00000531914 U2SURPO15042 1029 aaKnown RBP12.73□□□□□ -0.37
MS4A6A-215ENST00000531914 DDX10Q13206 875 aaKnown RBP12.73□□□□□ -0.37
MS4A6A-215ENST00000531914 PAXIP1Q6ZW49 1069 aaPredicted RBP12.73□□□□□ -0.37
MS4A6A-215ENST00000531914 LRCH3Q96II8 777 aa12.73□□□□□ -0.37
MS4A6A-215ENST00000531914 SLC4A9Q96Q91 983 aa12.73□□□□□ -0.37
MS4A6A-215ENST00000531914 LGR6Q9HBX8 967 aa12.73□□□□□ -0.37
MS4A6A-215ENST00000531914 COL24A1Q17RW2 1714 aa12.72□□□□□ -0.37
MS4A6A-215ENST00000531914 LOC102724428A0A0B4J2F2 783 aa12.72□□□□□ -0.37
MS4A6A-215ENST00000531914 SIK1P57059 783 aa12.72□□□□□ -0.37
MS4A6A-215ENST00000531914 ITPK1Q13572 414 aa12.72□□□□□ -0.37
MS4A6A-215ENST00000531914 AKAP4Q5JQC9 854 aa12.72□□□□□ -0.37
MS4A6A-215ENST00000531914 C1orf141Q5JVX7 400 aa12.72□□□□□ -0.37
MS4A6A-215ENST00000531914 AMIGO3Q86WK7 504 aa12.72□□□□□ -0.37
MS4A6A-215ENST00000531914 NFATC2IPQ8NCF5 419 aa12.72□□□□□ -0.37
MS4A6A-215ENST00000531914 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.72□□□□□ -0.37
MS4A6A-215ENST00000531914 TFCP2L1Q9NZI6 479 aa12.72□□□□□ -0.37
MS4A6A-215ENST00000531914 ADAMTS7Q9UKP4 1686 aa12.72□□□□□ -0.37
MS4A6A-215ENST00000531914 C4BP0C0L5 1744 aa12.71□□□□□ -0.37
MS4A6A-215ENST00000531914 CABP4P57796 275 aa12.71□□□□□ -0.37
MS4A6A-215ENST00000531914 LINC00116Q8NCU8 138 aa12.71□□□□□ -0.37
MS4A6A-215ENST00000531914 PHACTR3Q96KR7 559 aa12.71□□□□□ -0.37
MS4A6A-215ENST00000531914 MTFR1LQ9H019 292 aa12.71□□□□□ -0.37
MS4A6A-215ENST00000531914 WBP1LQ9NX94 342 aa12.71□□□□□ -0.37
MS4A6A-215ENST00000531914 UBR3Q6ZT12 1888 aa12.7□□□□□ -0.38
MS4A6A-215ENST00000531914 ITGBL1O95965 494 aaPredicted RBP12.7□□□□□ -0.38
MS4A6A-215ENST00000531914 TSR1Q2NL82 804 aaKnown RBP12.7□□□□□ -0.38
MS4A6A-215ENST00000531914 SMIM5Q71RC9 77 aa12.7□□□□□ -0.38
MS4A6A-215ENST00000531914 COL23A1Q86Y22 540 aaPredicted RBP12.7□□□□□ -0.38
MS4A6A-215ENST00000531914 CFAP53Q96M91 514 aa12.7□□□□□ -0.38
MS4A6A-215ENST00000531914 RSPH6AQ9H0K4 717 aa12.7□□□□□ -0.38
MS4A6A-215ENST00000531914 RNMTO43148 476 aaKnown RBP12.69□□□□□ -0.38
MS4A6A-215ENST00000531914 IRX2Q9BZI1 471 aaPredicted RBP12.69□□□□□ -0.38
MS4A6A-215ENST00000531914 TSR3Q9UJK0 312 aaKnown RBP12.69□□□□□ -0.38
MS4A6A-215ENST00000531914 HPS5Q9UPZ3 1129 aa12.69□□□□□ -0.38
MS4A6A-215ENST00000531914 ZNF831Q5JPB2 1677 aa12.69□□□□□ -0.38
MS4A6A-215ENST00000531914 PRKAR2BP31323 418 aa12.68□□□□□ -0.38
MS4A6A-215ENST00000531914 ATP6V1AP38606 617 aa12.68□□□□□ -0.38
MS4A6A-215ENST00000531914 IL17REQ8NFR9 667 aa12.68□□□□□ -0.38
MS4A6A-215ENST00000531914 MYH14Q7Z406 1995 aaKnown RBP12.68□□□□□ -0.38
MS4A6A-215ENST00000531914 MRC1P22897 1456 aa12.67□□□□□ -0.38
MS4A6A-215ENST00000531914 GRXCR2A6NFK2 248 aa12.67□□□□□ -0.38
MS4A6A-215ENST00000531914 U2AF1L5P0DN76 240 aaPredicted RBP12.67□□□□□ -0.38
MS4A6A-215ENST00000531914 ZEB1P37275 1124 aaPredicted RBP12.67□□□□□ -0.38
MS4A6A-215ENST00000531914 U2AF1Q01081 240 aaKnown RBP eCLIP12.67□□□□□ -0.38
MS4A6A-215ENST00000531914 SLC16A10Q8TF71 515 aa12.67□□□□□ -0.38
MS4A6A-215ENST00000531914 SLC52A2Q9HAB3 445 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms