RNA–Protein interactions for RNA: ENST00000531872.5

NXF1-212, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 390 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-212ENST00000531872 SETDB2Q96T68 719 aa10.64□□□□□ -0.71
NXF1-212ENST00000531872 TEX13AQ9BXU3 409 aaPredicted RBP10.64□□□□□ -0.71
NXF1-212ENST00000531872 PCDH10Q9P2E7 1040 aa10.64□□□□□ -0.71
NXF1-212ENST00000531872 HACL1Q9UJ83 578 aa10.64□□□□□ -0.71
NXF1-212ENST00000531872 TBC1D2BQ9UPU7 963 aa10.64□□□□□ -0.71
NXF1-212ENST00000531872 HEG1Q9ULI3 1381 aa10.64□□□□□ -0.71
NXF1-212ENST00000531872 WDR33Q9C0J8 1336 aaKnown RBP10.63□□□□□ -0.71
NXF1-212ENST00000531872 ZNF541Q9H0D2 1346 aa10.63□□□□□ -0.71
NXF1-212ENST00000531872 CAMTA2O94983 1202 aa10.63□□□□□ -0.71
NXF1-212ENST00000531872 EPHX2P34913 555 aa10.63□□□□□ -0.71
NXF1-212ENST00000531872 ST5P78524 1137 aa10.63□□□□□ -0.71
NXF1-212ENST00000531872 CCDC93Q567U6 631 aa10.63□□□□□ -0.71
NXF1-212ENST00000531872 EAPPQ56P03 285 aaPredicted RBP10.63□□□□□ -0.71
NXF1-212ENST00000531872 TTC5Q8N0Z6 440 aa10.63□□□□□ -0.71
NXF1-212ENST00000531872 ZNF496Q96IT1 587 aaPredicted RBP10.63□□□□□ -0.71
NXF1-212ENST00000531872 CACNA1SQ13698 1873 aa10.63□□□□□ -0.71
NXF1-212ENST00000531872 KLRG2A4D1S0 409 aaPredicted RBP10.62□□□□□ -0.71
NXF1-212ENST00000531872 HMOX1P09601 288 aa10.62□□□□□ -0.71
NXF1-212ENST00000531872 FKBP4Q02790 459 aaKnown RBP eCLIP10.62□□□□□ -0.71
NXF1-212ENST00000531872 ZNF790Q6PG37 636 aa10.62□□□□□ -0.71
NXF1-212ENST00000531872 PNMA8AQ86V59 439 aaPredicted RBP10.62□□□□□ -0.71
NXF1-212ENST00000531872 CNTROBQ8N137 903 aa10.62□□□□□ -0.71
NXF1-212ENST00000531872 CLEC11AQ9Y240 323 aa10.62□□□□□ -0.71
NXF1-212ENST00000531872 FZD9O00144 591 aa10.61□□□□□ -0.71
NXF1-212ENST00000531872 A1BGP04217 495 aa10.61□□□□□ -0.71
NXF1-212ENST00000531872 MLLT1Q03111 559 aaPredicted RBP10.61□□□□□ -0.71
NXF1-212ENST00000531872 MAP1SQ66K74 1059 aaPredicted RBP10.61□□□□□ -0.71
NXF1-212ENST00000531872 ZNF277Q9NRM2 450 aaPredicted RBP10.61□□□□□ -0.71
NXF1-212ENST00000531872 TIMELESSQ9UNS1 1208 aa10.61□□□□□ -0.71
NXF1-212ENST00000531872 THSD7BQ9C0I4 1608 aa10.61□□□□□ -0.71
NXF1-212ENST00000531872 RNF123Q5XPI4 1314 aa10.6□□□□□ -0.71
NXF1-212ENST00000531872 BCORQ6W2J9 1755 aa10.6□□□□□ -0.71
NXF1-212ENST00000531872 NPHP1O15259 732 aa10.6□□□□□ -0.71
NXF1-212ENST00000531872 NPR1P16066 1061 aa10.6□□□□□ -0.71
NXF1-212ENST00000531872 RTKN2Q8IZC4 609 aa10.6□□□□□ -0.71
NXF1-212ENST00000531872 IL17REQ8NFR9 667 aa10.6□□□□□ -0.71
NXF1-212ENST00000531872 DDX21Q9NR30 783 aaKnown RBP eCLIP10.6□□□□□ -0.71
NXF1-212ENST00000531872 ZNF330Q9Y3S2 320 aaPredicted RBP10.6□□□□□ -0.71
NXF1-212ENST00000531872 IARSP41252 1262 aaKnown RBP10.59□□□□□ -0.71
NXF1-212ENST00000531872 CLEC4GQ6UXB4 293 aa10.59□□□□□ -0.71
NXF1-212ENST00000531872 DZIP3Q86Y13 1208 aaKnown RBP10.59□□□□□ -0.71
NXF1-212ENST00000531872 GPC2Q8N158 579 aa10.59□□□□□ -0.71
NXF1-212ENST00000531872 ABT1Q9ULW3 272 aaKnown RBP10.59□□□□□ -0.71
NXF1-212ENST00000531872 KNSTRNQ9Y448 316 aa10.59□□□□□ -0.71
NXF1-212ENST00000531872 SIPA1L3O60292 1781 aaPredicted RBP10.59□□□□□ -0.71
NXF1-212ENST00000531872 SNED1Q8TER0 1413 aa10.58□□□□□ -0.72
NXF1-212ENST00000531872 CCDC85CA6NKD9 419 aa10.58□□□□□ -0.72
NXF1-212ENST00000531872 TEFQ10587 303 aa10.58□□□□□ -0.72
NXF1-212ENST00000531872 AMER1Q5JTC6 1135 aaPredicted RBP10.58□□□□□ -0.72
NXF1-212ENST00000531872 OLFM4Q6UX06 510 aa10.58□□□□□ -0.72
NXF1-212ENST00000531872 NPM2Q86SE8 214 aaKnown RBP10.58□□□□□ -0.72
NXF1-212ENST00000531872 NBPF5PQ86XG9 351 aaPredicted RBP10.58□□□□□ -0.72
NXF1-212ENST00000531872 FMNL2Q96PY5 1086 aa10.58□□□□□ -0.72
NXF1-212ENST00000531872 DIAPH1O60610 1272 aaKnown RBP10.57□□□□□ -0.72
NXF1-212ENST00000531872 ECE1P42892 770 aa10.57□□□□□ -0.72
NXF1-212ENST00000531872 SYNE4Q8N205 404 aa10.57□□□□□ -0.72
NXF1-212ENST00000531872 CAPNS2Q96L46 248 aa10.57□□□□□ -0.72
NXF1-212ENST00000531872 GPR101Q96P66 508 aaPredicted RBP10.57□□□□□ -0.72
NXF1-212ENST00000531872 LTBP1Q14766 1721 aa10.56□□□□□ -0.72
NXF1-212ENST00000531872 CEMIPQ8WUJ3 1361 aa10.56□□□□□ -0.72
NXF1-212ENST00000531872 GNAT3A8MTJ3 354 aa10.56□□□□□ -0.72
NXF1-212ENST00000531872 RGL2O15211 777 aa10.56□□□□□ -0.72
NXF1-212ENST00000531872 HSPA5P11021 654 aaKnown RBP10.56□□□□□ -0.72
NXF1-212ENST00000531872 ALDH1B1P30837 517 aa10.56□□□□□ -0.72
NXF1-212ENST00000531872 EIF4G2P78344 907 aaKnown RBP eCLIP10.56□□□□□ -0.72
NXF1-212ENST00000531872 FMR1Q06787 632 aaKnown RBP eCLIP10.56□□□□□ -0.72
NXF1-212ENST00000531872 CYP4F22Q6NT55 531 aa10.56□□□□□ -0.72
NXF1-212ENST00000531872 TPTE2Q6XPS3 522 aa10.56□□□□□ -0.72
NXF1-212ENST00000531872 PSMD1Q99460 953 aa10.56□□□□□ -0.72
NXF1-212ENST00000531872 BEGAINQ9BUH8 593 aa10.56□□□□□ -0.72
NXF1-212ENST00000531872 USP16Q9Y5T5 823 aa10.56□□□□□ -0.72
NXF1-212ENST00000531872 KCNQ3O43525 872 aa10.55□□□□□ -0.72
NXF1-212ENST00000531872 MAP2K2P36507 400 aa10.55□□□□□ -0.72
NXF1-212ENST00000531872 CST9Q5W186 159 aa10.55□□□□□ -0.72
NXF1-212ENST00000531872 GAS2L2Q8NHY3 880 aa10.55□□□□□ -0.72
NXF1-212ENST00000531872 JDP2Q8WYK2 163 aa10.55□□□□□ -0.72
NXF1-212ENST00000531872 ZNF652Q9Y2D9 606 aa10.55□□□□□ -0.72
NXF1-212ENST00000531872 TLL2Q9Y6L7 1015 aa10.55□□□□□ -0.72
NXF1-212ENST00000531872 COL4A5P29400 1685 aa10.54□□□□□ -0.72
NXF1-212ENST00000531872 PIP4K2AP48426 406 aaPredicted RBP10.54□□□□□ -0.72
NXF1-212ENST00000531872 SCNN1DP51172 638 aa10.54□□□□□ -0.72
NXF1-212ENST00000531872 EIF6P56537 245 aaKnown RBP10.54□□□□□ -0.72
NXF1-212ENST00000531872 NIP7Q9Y221 180 aaKnown RBP eCLIP10.54□□□□□ -0.72
NXF1-212ENST00000531872 TNRC18O15417 2968 aaPredicted RBP10.54□□□□□ -0.72
NXF1-212ENST00000531872 TRPM7Q96QT4 1865 aa10.53□□□□□ -0.72
NXF1-212ENST00000531872 BTBD11A6QL63 1104 aa10.53□□□□□ -0.72
NXF1-212ENST00000531872 CA12O43570 354 aa10.53□□□□□ -0.72
NXF1-212ENST00000531872 LMOD1P29536 600 aaPredicted RBP10.53□□□□□ -0.72
NXF1-212ENST00000531872 EPS15P42566 896 aa10.53□□□□□ -0.72
NXF1-212ENST00000531872 CRY2Q49AN0 593 aa10.53□□□□□ -0.72
NXF1-212ENST00000531872 CC2D2BQ6DHV5 1058 aa10.53□□□□□ -0.72
NXF1-212ENST00000531872 PAXIP1Q6ZW49 1069 aaPredicted RBP10.53□□□□□ -0.72
NXF1-212ENST00000531872 USP50Q70EL3 339 aaPredicted RBP10.53□□□□□ -0.72
NXF1-212ENST00000531872 MCOLN1Q9GZU1 580 aa10.53□□□□□ -0.72
NXF1-212ENST00000531872 TSKSQ9UJT2 592 aa10.53□□□□□ -0.72
NXF1-212ENST00000531872 GJA3Q9Y6H8 435 aa10.53□□□□□ -0.72
NXF1-212ENST00000531872 COL3A1P02461 1466 aaPredicted RBP10.53□□□□□ -0.72
NXF1-212ENST00000531872 PRAMEF22A3QJZ6 481 aa10.52□□□□□ -0.73
NXF1-212ENST00000531872 TRAF5O00463 557 aa10.52□□□□□ -0.73
NXF1-212ENST00000531872 AOC2O75106 756 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms