RNA–Protein interactions for RNA: ENST00000531749.1

LINC02548-201, Transcript of long intergenic non-protein coding RNA 2548, humanhuman

TSL 3 BASIC

Gene LINC02548, Length 484 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02548-201ENST00000531749 CHADLQ6NUI6 762 aa12.85□□□□□ -0.35
LINC02548-201ENST00000531749 PRPF40BQ6NWY9 871 aaKnown RBP12.85□□□□□ -0.35
LINC02548-201ENST00000531749 FMNL2Q96PY5 1086 aa12.85□□□□□ -0.35
LINC02548-201ENST00000531749 SETDB2Q96T68 719 aa12.85□□□□□ -0.35
LINC02548-201ENST00000531749 MKRN1Q9UHC7 482 aaKnown RBP12.85□□□□□ -0.35
LINC02548-201ENST00000531749 KLRG2A4D1S0 409 aaPredicted RBP12.84□□□□□ -0.35
LINC02548-201ENST00000531749 NBPF26B4DH59 902 aa12.84□□□□□ -0.35
LINC02548-201ENST00000531749 ITGBL1O95965 494 aaPredicted RBP12.84□□□□□ -0.35
LINC02548-201ENST00000531749 NBPF10Q6P3W6 841 aaKnown RBP12.84□□□□□ -0.35
LINC02548-201ENST00000531749 DZIP3Q86Y13 1208 aaKnown RBP12.84□□□□□ -0.35
LINC02548-201ENST00000531749 NBPF15Q8N660 670 aa12.84□□□□□ -0.35
LINC02548-201ENST00000531749 GAS2L2Q8NHY3 880 aa12.84□□□□□ -0.35
LINC02548-201ENST00000531749 CNKSR1Q969H4 720 aa12.84□□□□□ -0.35
LINC02548-201ENST00000531749 MASTLQ96GX5 879 aa12.84□□□□□ -0.35
LINC02548-201ENST00000531749 TAOK3Q9H2K8 898 aa12.84□□□□□ -0.35
LINC02548-201ENST00000531749 PDZRN3Q9UPQ7 1066 aa12.84□□□□□ -0.35
LINC02548-201ENST00000531749 BCORQ6W2J9 1755 aa12.84□□□□□ -0.35
LINC02548-201ENST00000531749 BTBD11A6QL63 1104 aa12.83□□□□□ -0.36
LINC02548-201ENST00000531749 CNBD1Q8NA66 436 aa12.83□□□□□ -0.36
LINC02548-201ENST00000531749 RSPH6AQ9H0K4 717 aa12.83□□□□□ -0.36
LINC02548-201ENST00000531749 ARFGEF2Q9Y6D5 1785 aa12.83□□□□□ -0.36
LINC02548-201ENST00000531749 PASKQ96RG2 1323 aa12.83□□□□□ -0.36
LINC02548-201ENST00000531749 PRKAR2BP31323 418 aa12.82□□□□□ -0.36
LINC02548-201ENST00000531749 DCTN1Q14203 1278 aa12.82□□□□□ -0.36
LINC02548-201ENST00000531749 CCER1Q8TC90 406 aaPredicted RBP12.82□□□□□ -0.36
LINC02548-201ENST00000531749 TAF1DQ9H5J8 278 aaPredicted RBP12.82□□□□□ -0.36
LINC02548-201ENST00000531749 CREBZFQ9NS37 354 aa12.82□□□□□ -0.36
LINC02548-201ENST00000531749 NPC1L1Q9UHC9 1359 aa12.81□□□□□ -0.36
LINC02548-201ENST00000531749 FOXN1O15353 648 aa12.81□□□□□ -0.36
LINC02548-201ENST00000531749 HLFQ16534 295 aa12.81□□□□□ -0.36
LINC02548-201ENST00000531749 MCM10Q7L590 875 aa12.81□□□□□ -0.36
LINC02548-201ENST00000531749 SLC51AQ86UW1 340 aa12.81□□□□□ -0.36
LINC02548-201ENST00000531749 L3MBTL3Q96JM7 780 aaPredicted RBP12.81□□□□□ -0.36
LINC02548-201ENST00000531749 ZNF541Q9H0D2 1346 aa12.81□□□□□ -0.36
LINC02548-201ENST00000531749 CLEC4GQ6UXB4 293 aa12.8□□□□□ -0.36
LINC02548-201ENST00000531749 ZNF277Q9NRM2 450 aaPredicted RBP12.8□□□□□ -0.36
LINC02548-201ENST00000531749 SCN4AP35499 1836 aa12.8□□□□□ -0.36
LINC02548-201ENST00000531749 FAM177BA6PVY3 158 aa12.79□□□□□ -0.36
LINC02548-201ENST00000531749 VEGFBP49765 207 aa12.79□□□□□ -0.36
LINC02548-201ENST00000531749 ST5P78524 1137 aa12.79□□□□□ -0.36
LINC02548-201ENST00000531749 NBPF5PQ86XG9 351 aaPredicted RBP12.79□□□□□ -0.36
LINC02548-201ENST00000531749 MIS18AQ9NYP9 233 aa12.79□□□□□ -0.36
LINC02548-201ENST00000531749 CNTNAP1P78357 1384 aa12.79□□□□□ -0.36
LINC02548-201ENST00000531749 SNED1Q8TER0 1413 aa12.79□□□□□ -0.36
LINC02548-201ENST00000531749 SNRPA1P09661 255 aaKnown RBP12.78□□□□□ -0.36
LINC02548-201ENST00000531749 NPR1P16066 1061 aa12.78□□□□□ -0.36
LINC02548-201ENST00000531749 FKBP4Q02790 459 aaKnown RBP eCLIP12.78□□□□□ -0.36
LINC02548-201ENST00000531749 ADAMTSL1Q8N6G6 1762 aa12.78□□□□□ -0.36
LINC02548-201ENST00000531749 COL4A5P29400 1685 aa12.77□□□□□ -0.36
LINC02548-201ENST00000531749 FZD9O00144 591 aa12.77□□□□□ -0.37
LINC02548-201ENST00000531749 FMR1Q06787 632 aaKnown RBP eCLIP12.77□□□□□ -0.37
LINC02548-201ENST00000531749 CCDC93Q567U6 631 aa12.77□□□□□ -0.37
LINC02548-201ENST00000531749 LDHDQ86WU2 507 aa12.77□□□□□ -0.37
LINC02548-201ENST00000531749 SYNE4Q8N205 404 aa12.77□□□□□ -0.37
LINC02548-201ENST00000531749 NIP7Q9Y221 180 aaKnown RBP eCLIP12.77□□□□□ -0.37
LINC02548-201ENST00000531749 NPHP1O15259 732 aa12.76□□□□□ -0.37
LINC02548-201ENST00000531749 SOGA3Q5TF21 947 aa12.76□□□□□ -0.37
LINC02548-201ENST00000531749 MAP1SQ66K74 1059 aaPredicted RBP12.76□□□□□ -0.37
LINC02548-201ENST00000531749 TPTE2Q6XPS3 522 aa12.76□□□□□ -0.37
LINC02548-201ENST00000531749 WBP1LQ9NX94 342 aa12.76□□□□□ -0.37
LINC02548-201ENST00000531749 NUP98P52948 1817 aa12.76□□□□□ -0.37
LINC02548-201ENST00000531749 TMEM88BA6NKF7 163 aa12.75□□□□□ -0.37
LINC02548-201ENST00000531749 PPP2R1AP30153 589 aa12.75□□□□□ -0.37
LINC02548-201ENST00000531749 EAPPQ56P03 285 aaPredicted RBP12.75□□□□□ -0.37
LINC02548-201ENST00000531749 RNF123Q5XPI4 1314 aa12.75□□□□□ -0.37
LINC02548-201ENST00000531749 NPM2Q86SE8 214 aaKnown RBP12.75□□□□□ -0.37
LINC02548-201ENST00000531749 HACL1Q9UJ83 578 aa12.75□□□□□ -0.37
LINC02548-201ENST00000531749 LTBP1Q14766 1721 aa12.74□□□□□ -0.37
LINC02548-201ENST00000531749 ABCC12Q96J65 1359 aa12.74□□□□□ -0.37
LINC02548-201ENST00000531749 IQCA1LA6NCM1 817 aa12.74□□□□□ -0.37
LINC02548-201ENST00000531749 U2AF1L5P0DN76 240 aaPredicted RBP12.74□□□□□ -0.37
LINC02548-201ENST00000531749 EPHX2P34913 555 aa12.74□□□□□ -0.37
LINC02548-201ENST00000531749 IARSP41252 1262 aaKnown RBP12.74□□□□□ -0.37
LINC02548-201ENST00000531749 U2AF1Q01081 240 aaKnown RBP eCLIP12.74□□□□□ -0.37
LINC02548-201ENST00000531749 TTLL7Q6ZT98 887 aa12.74□□□□□ -0.37
LINC02548-201ENST00000531749 NUTM1Q86Y26 1132 aa12.74□□□□□ -0.37
LINC02548-201ENST00000531749 PRDM10Q9NQV6 1147 aa12.74□□□□□ -0.37
LINC02548-201ENST00000531749 RGL2O15211 777 aa12.73□□□□□ -0.37
LINC02548-201ENST00000531749 TAF7Q15545 349 aaPredicted RBP12.73□□□□□ -0.37
LINC02548-201ENST00000531749 CRY2Q49AN0 593 aa12.73□□□□□ -0.37
LINC02548-201ENST00000531749 C3orf67Q6ZVT6 689 aa12.73□□□□□ -0.37
LINC02548-201ENST00000531749 RTKN2Q8IZC4 609 aa12.73□□□□□ -0.37
LINC02548-201ENST00000531749 CNTROBQ8N137 903 aa12.73□□□□□ -0.37
LINC02548-201ENST00000531749 NGEFQ8N5V2 710 aa12.73□□□□□ -0.37
LINC02548-201ENST00000531749 CLEC11AQ9Y240 323 aa12.73□□□□□ -0.37
LINC02548-201ENST00000531749 DLG5Q8TDM6 1919 aa12.72□□□□□ -0.37
LINC02548-201ENST00000531749 ALDH1B1P30837 517 aa12.72□□□□□ -0.37
LINC02548-201ENST00000531749 LBX1P52954 281 aa12.72□□□□□ -0.37
LINC02548-201ENST00000531749 ZNF652Q9Y2D9 606 aa12.72□□□□□ -0.37
LINC02548-201ENST00000531749 UBN2Q6ZU65 1347 aa12.71□□□□□ -0.37
LINC02548-201ENST00000531749 RASSF10A6NK89 507 aa12.71□□□□□ -0.37
LINC02548-201ENST00000531749 HTATSF1O43719 755 aaKnown RBP12.71□□□□□ -0.37
LINC02548-201ENST00000531749 HOXA10P31260 410 aaPredicted RBP12.71□□□□□ -0.37
LINC02548-201ENST00000531749 EPS15P42566 896 aa12.71□□□□□ -0.37
LINC02548-201ENST00000531749 DEFB115Q30KQ5 88 aa12.71□□□□□ -0.37
LINC02548-201ENST00000531749 SUSD4Q5VX71 490 aa12.71□□□□□ -0.37
LINC02548-201ENST00000531749 RTF1Q92541 710 aaKnown RBP12.71□□□□□ -0.37
LINC02548-201ENST00000531749 PSMD1Q99460 953 aa12.71□□□□□ -0.37
LINC02548-201ENST00000531749 HSPA8P11142 646 aaKnown RBP12.7□□□□□ -0.38
LINC02548-201ENST00000531749 CTCFP49711 727 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms