RNA–Protein interactions for RNA: ENST00000531550.1

SCN4B-205, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 1,206 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-205ENST00000531550 POTEIP0CG38 1075 aa24.26■■□□□ 1.47
SCN4B-205ENST00000531550 POTEJP0CG39 1038 aa24.26■■□□□ 1.47
SCN4B-205ENST00000531550 ST5P78524 1137 aa24.26■■□□□ 1.47
SCN4B-205ENST00000531550 PRPF40BQ6NWY9 871 aaKnown RBP24.26■■□□□ 1.47
SCN4B-205ENST00000531550 FMNL2Q96PY5 1086 aa24.26■■□□□ 1.47
SCN4B-205ENST00000531550 SRGNP10124 158 aa24.25■■□□□ 1.47
SCN4B-205ENST00000531550 MKRN1Q9UHC7 482 aaKnown RBP24.25■■□□□ 1.47
SCN4B-205ENST00000531550 U2SURPO15042 1029 aaKnown RBP24.24■■□□□ 1.47
SCN4B-205ENST00000531550 SOGA3Q5TF21 947 aa24.24■■□□□ 1.47
SCN4B-205ENST00000531550 NPM2Q86SE8 214 aaKnown RBP24.24■■□□□ 1.47
SCN4B-205ENST00000531550 CEMIPQ8WUJ3 1361 aa24.24■■□□□ 1.47
SCN4B-205ENST00000531550 ZNF316A6NFI3 1004 aaPredicted RBP24.23■■□□□ 1.47
SCN4B-205ENST00000531550 DZIP3Q86Y13 1208 aaKnown RBP24.23■■□□□ 1.47
SCN4B-205ENST00000531550 MASTLQ96GX5 879 aa24.23■■□□□ 1.47
SCN4B-205ENST00000531550 KCNQ3O43525 872 aa24.21■■□□□ 1.47
SCN4B-205ENST00000531550 CNTNAP1P78357 1384 aa24.2■■□□□ 1.46
SCN4B-205ENST00000531550 SCN4AP35499 1836 aa24.2■■□□□ 1.46
SCN4B-205ENST00000531550 IQCA1LA6NCM1 817 aa24.2■■□□□ 1.46
SCN4B-205ENST00000531550 PASKQ96RG2 1323 aa24.19■■□□□ 1.46
SCN4B-205ENST00000531550 BTBD11A6QL63 1104 aa24.19■■□□□ 1.46
SCN4B-205ENST00000531550 LDHDQ86WU2 507 aa24.19■■□□□ 1.46
SCN4B-205ENST00000531550 L3MBTL3Q96JM7 780 aaPredicted RBP24.19■■□□□ 1.46
SCN4B-205ENST00000531550 NPC1L1Q9UHC9 1359 aa24.18■■□□□ 1.46
SCN4B-205ENST00000531550 PIP4K2AP48426 406 aaPredicted RBP24.18■■□□□ 1.46
SCN4B-205ENST00000531550 CCDC93Q567U6 631 aa24.18■■□□□ 1.46
SCN4B-205ENST00000531550 C7orf43Q8WVR3 580 aa24.18■■□□□ 1.46
SCN4B-205ENST00000531550 NBPF5PQ86XG9 351 aaPredicted RBP24.17■■□□□ 1.46
SCN4B-205ENST00000531550 TAF1DQ9H5J8 278 aaPredicted RBP24.17■■□□□ 1.46
SCN4B-205ENST00000531550 USP16Q9Y5T5 823 aa24.17■■□□□ 1.46
SCN4B-205ENST00000531550 PRAMEF22A3QJZ6 481 aa24.15■■□□□ 1.46
SCN4B-205ENST00000531550 FOXN1O15353 648 aa24.15■■□□□ 1.46
SCN4B-205ENST00000531550 CLEC4GQ6UXB4 293 aa24.15■■□□□ 1.46
SCN4B-205ENST00000531550 PHACTR3Q96KR7 559 aa24.15■■□□□ 1.46
SCN4B-205ENST00000531550 ZNF541Q9H0D2 1346 aa24.14■■□□□ 1.46
SCN4B-205ENST00000531550 NPR1P16066 1061 aa24.14■■□□□ 1.45
SCN4B-205ENST00000531550 FKBP4Q02790 459 aaKnown RBP eCLIP24.14■■□□□ 1.45
SCN4B-205ENST00000531550 CNGB1Q14028 1251 aaPredicted RBP24.14■■□□□ 1.45
SCN4B-205ENST00000531550 ZNF652Q9Y2D9 606 aa24.14■■□□□ 1.45
SCN4B-205ENST00000531550 ADAMTSL1Q8N6G6 1762 aa24.14■■□□□ 1.45
SCN4B-205ENST00000531550 PRKAR2BP31323 418 aa24.13■■□□□ 1.45
SCN4B-205ENST00000531550 RSPH6AQ9H0K4 717 aa24.13■■□□□ 1.45
SCN4B-205ENST00000531550 KLRG2A4D1S0 409 aaPredicted RBP24.12■■□□□ 1.45
SCN4B-205ENST00000531550 ZNF277Q9NRM2 450 aaPredicted RBP24.12■■□□□ 1.45
SCN4B-205ENST00000531550 TMEM88BA6NKF7 163 aa24.11■■□□□ 1.45
SCN4B-205ENST00000531550 EAPPQ56P03 285 aaPredicted RBP24.11■■□□□ 1.45
SCN4B-205ENST00000531550 PRDM10Q9NQV6 1147 aa24.11■■□□□ 1.45
SCN4B-205ENST00000531550 ITGBL1O95965 494 aaPredicted RBP24.1■■□□□ 1.45
SCN4B-205ENST00000531550 SNRPA1P09661 255 aaKnown RBP24.1■■□□□ 1.45
SCN4B-205ENST00000531550 VEGFBP49765 207 aa24.1■■□□□ 1.45
SCN4B-205ENST00000531550 OLFM4Q6UX06 510 aa24.1■■□□□ 1.45
SCN4B-205ENST00000531550 HACL1Q9UJ83 578 aa24.1■■□□□ 1.45
SCN4B-205ENST00000531550 TPTE2Q6XPS3 522 aa24.09■■□□□ 1.45
SCN4B-205ENST00000531550 NIP7Q9Y221 180 aaKnown RBP eCLIP24.09■■□□□ 1.45
SCN4B-205ENST00000531550 RGL2O15211 777 aa24.08■■□□□ 1.45
SCN4B-205ENST00000531550 RTKN2Q8IZC4 609 aa24.08■■□□□ 1.45
SCN4B-205ENST00000531550 AIDAQ96BJ3 306 aa24.08■■□□□ 1.45
SCN4B-205ENST00000531550 NBPF26B4DH59 902 aa24.07■■□□□ 1.44
SCN4B-205ENST00000531550 EPHX2P34913 555 aa24.07■■□□□ 1.44
SCN4B-205ENST00000531550 CTCFP49711 727 aaPredicted RBP24.07■■□□□ 1.44
SCN4B-205ENST00000531550 NBPF10Q6P3W6 841 aaKnown RBP24.07■■□□□ 1.44
SCN4B-205ENST00000531550 MCM10Q7L590 875 aa24.07■■□□□ 1.44
SCN4B-205ENST00000531550 NBPF15Q8N660 670 aa24.07■■□□□ 1.44
SCN4B-205ENST00000531550 CLEC11AQ9Y240 323 aa24.07■■□□□ 1.44
SCN4B-205ENST00000531550 FAM177BA6PVY3 158 aa24.06■■□□□ 1.44
SCN4B-205ENST00000531550 CFAP53Q96M91 514 aa24.06■■□□□ 1.44
SCN4B-205ENST00000531550 RNF123Q5XPI4 1314 aa24.06■■□□□ 1.44
SCN4B-205ENST00000531550 SNED1Q8TER0 1413 aa24.05■■□□□ 1.44
SCN4B-205ENST00000531550 FZD9O00144 591 aa24.05■■□□□ 1.44
SCN4B-205ENST00000531550 IARSP41252 1262 aaKnown RBP24.05■■□□□ 1.44
SCN4B-205ENST00000531550 RTF1Q92541 710 aaKnown RBP24.05■■□□□ 1.44
SCN4B-205ENST00000531550 LAMB4A4D0S4 1761 aa24.05■■□□□ 1.44
SCN4B-205ENST00000531550 ALDH1B1P30837 517 aa24.03■■□□□ 1.44
SCN4B-205ENST00000531550 HLFQ16534 295 aa24.03■■□□□ 1.44
SCN4B-205ENST00000531550 PNMA8AQ86V59 439 aaPredicted RBP24.03■■□□□ 1.44
SCN4B-205ENST00000531550 SYNE4Q8N205 404 aa24.03■■□□□ 1.44
SCN4B-205ENST00000531550 WBP1LQ9NX94 342 aa24.03■■□□□ 1.44
SCN4B-205ENST00000531550 RASSF10A6NK89 507 aa24.02■■□□□ 1.44
SCN4B-205ENST00000531550 DCTN1Q14203 1278 aa24.02■■□□□ 1.44
SCN4B-205ENST00000531550 MAP1SQ66K74 1059 aaPredicted RBP24.02■■□□□ 1.44
SCN4B-205ENST00000531550 CNTROBQ8N137 903 aa24.02■■□□□ 1.44
SCN4B-205ENST00000531550 GPC2Q8N158 579 aa24.02■■□□□ 1.44
SCN4B-205ENST00000531550 NUDCQ9Y266 331 aa24.02■■□□□ 1.44
SCN4B-205ENST00000531550 ABCC12Q96J65 1359 aa24.02■■□□□ 1.44
SCN4B-205ENST00000531550 PSMD1Q99460 953 aa24.01■■□□□ 1.43
SCN4B-205ENST00000531550 COL4A5P29400 1685 aa24■■□□□ 1.43
SCN4B-205ENST00000531550 U2AF1L5P0DN76 240 aaPredicted RBP24■■□□□ 1.43
SCN4B-205ENST00000531550 LBX1P52954 281 aa24■■□□□ 1.43
SCN4B-205ENST00000531550 U2AF1Q01081 240 aaKnown RBP eCLIP24■■□□□ 1.43
SCN4B-205ENST00000531550 LTBP1Q14766 1721 aa23.99■■□□□ 1.43
SCN4B-205ENST00000531550 GTF2E1P29083 439 aaPredicted RBP23.99■■□□□ 1.43
SCN4B-205ENST00000531550 DEFB115Q30KQ5 88 aa23.99■■□□□ 1.43
SCN4B-205ENST00000531550 CRY2Q49AN0 593 aa23.99■■□□□ 1.43
SCN4B-205ENST00000531550 HTATSF1O43719 755 aaKnown RBP23.98■■□□□ 1.43
SCN4B-205ENST00000531550 JDP2Q8WYK2 163 aa23.98■■□□□ 1.43
SCN4B-205ENST00000531550 HSPA8P11142 646 aaKnown RBP23.97■■□□□ 1.43
SCN4B-205ENST00000531550 NYXQ9GZU5 481 aa23.97■■□□□ 1.43
SCN4B-205ENST00000531550 NUP98P52948 1817 aa23.96■■□□□ 1.43
SCN4B-205ENST00000531550 THSD7BQ9C0I4 1608 aa23.96■■□□□ 1.43
SCN4B-205ENST00000531550 WDR33Q9C0J8 1336 aaKnown RBP23.96■■□□□ 1.43
SCN4B-205ENST00000531550 NUTM1Q86Y26 1132 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms