RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 DCTN1Q14203 1278 aa24.63■■□□□ 1.53
SSSCA1-206ENST00000531405 CNBD1Q8NA66 436 aa24.63■■□□□ 1.53
SSSCA1-206ENST00000531405 NPHP1O15259 732 aa24.62■■□□□ 1.53
SSSCA1-206ENST00000531405 RTF1Q92541 710 aaKnown RBP24.62■■□□□ 1.53
SSSCA1-206ENST00000531405 SMC1BQ8NDV3 1235 aa24.61■■□□□ 1.53
SSSCA1-206ENST00000531405 PDZRN3Q9UPQ7 1066 aa24.61■■□□□ 1.53
SSSCA1-206ENST00000531405 VEGFAP15692 232 aaPredicted RBP24.6■■□□□ 1.53
SSSCA1-206ENST00000531405 KLRG1Q96E93 195 aa24.6■■□□□ 1.53
SSSCA1-206ENST00000531405 ST5P78524 1137 aa24.59■■□□□ 1.53
SSSCA1-206ENST00000531405 KDM3BQ7LBC6 1761 aa24.59■■□□□ 1.53
SSSCA1-206ENST00000531405 SNRPA1P09661 255 aaKnown RBP24.58■■□□□ 1.53
SSSCA1-206ENST00000531405 NUP98P52948 1817 aa24.57■■□□□ 1.52
SSSCA1-206ENST00000531405 POTECB2RU33 542 aa24.56■■□□□ 1.52
SSSCA1-206ENST00000531405 NBPF26B4DH59 902 aa24.56■■□□□ 1.52
SSSCA1-206ENST00000531405 SRGNP10124 158 aa24.56■■□□□ 1.52
SSSCA1-206ENST00000531405 ERFEQ4G0M1 354 aa24.56■■□□□ 1.52
SSSCA1-206ENST00000531405 STYK1Q6J9G0 422 aa24.56■■□□□ 1.52
SSSCA1-206ENST00000531405 PRPF40BQ6NWY9 871 aaKnown RBP24.56■■□□□ 1.52
SSSCA1-206ENST00000531405 NBPF10Q6P3W6 841 aaKnown RBP24.56■■□□□ 1.52
SSSCA1-206ENST00000531405 NBPF15Q8N660 670 aa24.56■■□□□ 1.52
SSSCA1-206ENST00000531405 NBPF5PQ86XG9 351 aaPredicted RBP24.55■■□□□ 1.52
SSSCA1-206ENST00000531405 CNKSR1Q969H4 720 aa24.55■■□□□ 1.52
SSSCA1-206ENST00000531405 MASTLQ96GX5 879 aa24.54■■□□□ 1.52
SSSCA1-206ENST00000531405 TAOK3Q9H2K8 898 aa24.54■■□□□ 1.52
SSSCA1-206ENST00000531405 MIS18AQ9NYP9 233 aa24.54■■□□□ 1.52
SSSCA1-206ENST00000531405 DPY19L2Q6NUT2 758 aa24.53■■□□□ 1.52
SSSCA1-206ENST00000531405 CLEC4GQ6UXB4 293 aa24.53■■□□□ 1.52
SSSCA1-206ENST00000531405 JMYQ8N9B5 988 aa24.53■■□□□ 1.52
SSSCA1-206ENST00000531405 ZNF652Q9Y2D9 606 aa24.53■■□□□ 1.52
SSSCA1-206ENST00000531405 LTBP3Q9NS15 1303 aa24.53■■□□□ 1.52
SSSCA1-206ENST00000531405 HTATSF1O43719 755 aaKnown RBP24.52■■□□□ 1.52
SSSCA1-206ENST00000531405 TAF7Q15545 349 aaPredicted RBP24.51■■□□□ 1.51
SSSCA1-206ENST00000531405 NIP7Q9Y221 180 aaKnown RBP eCLIP24.51■■□□□ 1.51
SSSCA1-206ENST00000531405 FAM177BA6PVY3 158 aa24.5■■□□□ 1.51
SSSCA1-206ENST00000531405 HLFQ16534 295 aa24.49■■□□□ 1.51
SSSCA1-206ENST00000531405 DDNO94850 711 aaPredicted RBP24.48■■□□□ 1.51
SSSCA1-206ENST00000531405 SCN4AP35499 1836 aa24.48■■□□□ 1.51
SSSCA1-206ENST00000531405 SOGA3Q5TF21 947 aa24.47■■□□□ 1.51
SSSCA1-206ENST00000531405 C7orf43Q8WVR3 580 aa24.47■■□□□ 1.51
SSSCA1-206ENST00000531405 NPR1P16066 1061 aa24.46■■□□□ 1.51
SSSCA1-206ENST00000531405 OLFM4Q6UX06 510 aa24.46■■□□□ 1.51
SSSCA1-206ENST00000531405 TPTE2Q6XPS3 522 aa24.46■■□□□ 1.51
SSSCA1-206ENST00000531405 NGEFQ8N5V2 710 aa24.46■■□□□ 1.51
SSSCA1-206ENST00000531405 POTEIP0CG38 1075 aa24.45■■□□□ 1.5
SSSCA1-206ENST00000531405 POTEJP0CG39 1038 aa24.45■■□□□ 1.5
SSSCA1-206ENST00000531405 KLRG2A4D1S0 409 aaPredicted RBP24.44■■□□□ 1.5
SSSCA1-206ENST00000531405 CCDC93Q567U6 631 aa24.44■■□□□ 1.5
SSSCA1-206ENST00000531405 THUMPD2Q9BTF0 503 aaKnown RBP24.44■■□□□ 1.5
SSSCA1-206ENST00000531405 RGL2O15211 777 aa24.43■■□□□ 1.5
SSSCA1-206ENST00000531405 NEFMP07197 916 aa24.43■■□□□ 1.5
SSSCA1-206ENST00000531405 COL13A1Q5TAT6 717 aaPredicted RBP24.43■■□□□ 1.5
SSSCA1-206ENST00000531405 PLEKHF1Q96S99 279 aa24.43■■□□□ 1.5
SSSCA1-206ENST00000531405 ABCC12Q96J65 1359 aa24.42■■□□□ 1.5
SSSCA1-206ENST00000531405 ZNF277Q9NRM2 450 aaPredicted RBP24.41■■□□□ 1.5
SSSCA1-206ENST00000531405 GTF2E1P29083 439 aaPredicted RBP24.4■■□□□ 1.5
SSSCA1-206ENST00000531405 EIF4A1P60842 406 aaKnown RBP24.4■■□□□ 1.5
SSSCA1-206ENST00000531405 FKBP4Q02790 459 aaKnown RBP eCLIP24.4■■□□□ 1.5
SSSCA1-206ENST00000531405 NFE2L2Q16236 605 aa24.4■■□□□ 1.5
SSSCA1-206ENST00000531405 CHADLQ6NUI6 762 aa24.4■■□□□ 1.5
SSSCA1-206ENST00000531405 RRP7AQ9Y3A4 280 aaKnown RBP24.4■■□□□ 1.5
SSSCA1-206ENST00000531405 TTLL7Q6ZT98 887 aa24.39■■□□□ 1.49
SSSCA1-206ENST00000531405 NUTM1Q86Y26 1132 aa24.39■■□□□ 1.49
SSSCA1-206ENST00000531405 PNISRQ8TF01 805 aaKnown RBP24.39■■□□□ 1.49
SSSCA1-206ENST00000531405 MAP3K15Q6ZN16 1313 aa24.38■■□□□ 1.49
SSSCA1-206ENST00000531405 ZNF541Q9H0D2 1346 aa24.38■■□□□ 1.49
SSSCA1-206ENST00000531405 MYL6BP14649 208 aa24.38■■□□□ 1.49
SSSCA1-206ENST00000531405 ERVV-1B6SEH8 477 aa24.36■■□□□ 1.49
SSSCA1-206ENST00000531405 GPTP24298 496 aa24.36■■□□□ 1.49
SSSCA1-206ENST00000531405 KIF6Q6ZMV9 814 aa24.36■■□□□ 1.49
SSSCA1-206ENST00000531405 L3MBTL3Q96JM7 780 aaPredicted RBP24.36■■□□□ 1.49
SSSCA1-206ENST00000531405 ZBTB3Q9H5J0 574 aa24.36■■□□□ 1.49
SSSCA1-206ENST00000531405 MAPK8IP3Q9UPT6 1336 aa24.35■■□□□ 1.49
SSSCA1-206ENST00000531405 ADAMTSL1Q8N6G6 1762 aa24.35■■□□□ 1.49
SSSCA1-206ENST00000531405 HSPA1AP0DMV8 641 aaKnown RBP24.35■■□□□ 1.49
SSSCA1-206ENST00000531405 HSPA1BP0DMV9 641 aaKnown RBP24.35■■□□□ 1.49
SSSCA1-206ENST00000531405 ALDH1B1P30837 517 aa24.35■■□□□ 1.49
SSSCA1-206ENST00000531405 RTKN2Q8IZC4 609 aa24.35■■□□□ 1.49
SSSCA1-206ENST00000531405 NYXQ9GZU5 481 aa24.35■■□□□ 1.49
SSSCA1-206ENST00000531405 TAF1DQ9H5J8 278 aaPredicted RBP24.35■■□□□ 1.49
SSSCA1-206ENST00000531405 SNED1Q8TER0 1413 aa24.35■■□□□ 1.49
SSSCA1-206ENST00000531405 UBN2Q6ZU65 1347 aa24.35■■□□□ 1.49
SSSCA1-206ENST00000531405 ANKRD36CQ5JPF3 1778 aa24.34■■□□□ 1.49
SSSCA1-206ENST00000531405 IQCA1LA6NCM1 817 aa24.34■■□□□ 1.49
SSSCA1-206ENST00000531405 CRY2Q49AN0 593 aa24.34■■□□□ 1.49
SSSCA1-206ENST00000531405 SYNE4Q8N205 404 aa24.34■■□□□ 1.49
SSSCA1-206ENST00000531405 LAMB2P55268 1798 aa24.34■■□□□ 1.49
SSSCA1-206ENST00000531405 IARSP41252 1262 aaKnown RBP24.33■■□□□ 1.49
SSSCA1-206ENST00000531405 CREBZFQ9NS37 354 aa24.33■■□□□ 1.49
SSSCA1-206ENST00000531405 MKRN1Q9UHC7 482 aaKnown RBP24.33■■□□□ 1.49
SSSCA1-206ENST00000531405 COL4A5P29400 1685 aa24.33■■□□□ 1.49
SSSCA1-206ENST00000531405 LDHDQ86WU2 507 aa24.32■■□□□ 1.48
SSSCA1-206ENST00000531405 EAPPQ56P03 285 aaPredicted RBP24.31■■□□□ 1.48
SSSCA1-206ENST00000531405 SUSD4Q5VX71 490 aa24.31■■□□□ 1.48
SSSCA1-206ENST00000531405 SLC51AQ86UW1 340 aa24.31■■□□□ 1.48
SSSCA1-206ENST00000531405 IBTKQ9P2D0 1353 aaPredicted RBP24.3■■□□□ 1.48
SSSCA1-206ENST00000531405 RIC1Q4ADV7 1423 aa24.3■■□□□ 1.48
SSSCA1-206ENST00000531405 RPGRQ92834 1020 aaKnown RBP24.3■■□□□ 1.48
SSSCA1-206ENST00000531405 PNNQ9H307 717 aaKnown RBP24.3■■□□□ 1.48
SSSCA1-206ENST00000531405 TSPYL4Q9UJ04 414 aa24.3■■□□□ 1.48
SSSCA1-206ENST00000531405 RNF123Q5XPI4 1314 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms