RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 NGEFQ8N5V2 710 aa29.35■■■□□ 2.29
TRAPPC4-210ENST00000531290 ZC3H4Q9UPT8 1303 aaKnown RBP29.35■■■□□ 2.29
TRAPPC4-210ENST00000531290 RIPK4P57078 832 aa29.34■■■□□ 2.29
TRAPPC4-210ENST00000531290 STYK1Q6J9G0 422 aa29.34■■■□□ 2.29
TRAPPC4-210ENST00000531290 RRAGCQ9HB90 399 aa29.34■■■□□ 2.29
TRAPPC4-210ENST00000531290 RRP7AQ9Y3A4 280 aaKnown RBP29.34■■■□□ 2.29
TRAPPC4-210ENST00000531290 SCN7AQ01118 1682 aa29.34■■■□□ 2.29
TRAPPC4-210ENST00000531290 NFKBIEO00221 500 aa29.33■■■□□ 2.29
TRAPPC4-210ENST00000531290 SRGNP10124 158 aa29.33■■■□□ 2.29
TRAPPC4-210ENST00000531290 MASTLQ96GX5 879 aa29.33■■■□□ 2.29
TRAPPC4-210ENST00000531290 TSPYL4Q9UJ04 414 aa29.32■■■□□ 2.28
TRAPPC4-210ENST00000531290 MYBBP1AQ9BQG0 1328 aaKnown RBP29.31■■■□□ 2.28
TRAPPC4-210ENST00000531290 FAM177BA6PVY3 158 aa29.31■■■□□ 2.28
TRAPPC4-210ENST00000531290 PRELPP51888 382 aa29.31■■■□□ 2.28
TRAPPC4-210ENST00000531290 HLFQ16534 295 aa29.31■■■□□ 2.28
TRAPPC4-210ENST00000531290 RBM46Q8TBY0 533 aaKnown RBP29.31■■■□□ 2.28
TRAPPC4-210ENST00000531290 CEP350Q5VT06 3117 aa29.31■■■□□ 2.28
TRAPPC4-210ENST00000531290 GTF2E1P29083 439 aaPredicted RBP29.3■■■□□ 2.28
TRAPPC4-210ENST00000531290 LMOD3Q0VAK6 560 aa29.29■■■□□ 2.28
TRAPPC4-210ENST00000531290 PRPF40BQ6NWY9 871 aaKnown RBP29.29■■■□□ 2.28
TRAPPC4-210ENST00000531290 GLTPD2A6NH11 291 aa29.28■■■□□ 2.28
TRAPPC4-210ENST00000531290 ERVV-1B6SEH8 477 aa29.28■■■□□ 2.28
TRAPPC4-210ENST00000531290 MYL6BP14649 208 aa29.28■■■□□ 2.28
TRAPPC4-210ENST00000531290 TMPOP42166 694 aaKnown RBP29.28■■■□□ 2.28
TRAPPC4-210ENST00000531290 APLP1P51693 650 aa29.28■■■□□ 2.28
TRAPPC4-210ENST00000531290 SOGA3Q5TF21 947 aa29.28■■■□□ 2.28
TRAPPC4-210ENST00000531290 KIF6Q6ZMV9 814 aa29.28■■■□□ 2.28
TRAPPC4-210ENST00000531290 NPR1P16066 1061 aa29.26■■■□□ 2.27
TRAPPC4-210ENST00000531290 MAP3K15Q6ZN16 1313 aa29.25■■■□□ 2.27
TRAPPC4-210ENST00000531290 WDR43Q15061 677 aaKnown RBP eCLIP29.25■■■□□ 2.27
TRAPPC4-210ENST00000531290 DPY19L2Q6NUT2 758 aa29.25■■■□□ 2.27
TRAPPC4-210ENST00000531290 TAOK3Q9H2K8 898 aa29.25■■■□□ 2.27
TRAPPC4-210ENST00000531290 BABAM1Q9NWV8 329 aa29.25■■■□□ 2.27
TRAPPC4-210ENST00000531290 KLRG2A4D1S0 409 aaPredicted RBP29.24■■■□□ 2.27
TRAPPC4-210ENST00000531290 ZEB1P37275 1124 aaPredicted RBP29.24■■■□□ 2.27
TRAPPC4-210ENST00000531290 FSTL1Q12841 308 aa29.24■■■□□ 2.27
TRAPPC4-210ENST00000531290 ERFEQ4G0M1 354 aa29.24■■■□□ 2.27
TRAPPC4-210ENST00000531290 TTLL7Q6ZT98 887 aa29.24■■■□□ 2.27
TRAPPC4-210ENST00000531290 NYXQ9GZU5 481 aa29.24■■■□□ 2.27
TRAPPC4-210ENST00000531290 VEGFAP15692 232 aaPredicted RBP29.23■■■□□ 2.27
TRAPPC4-210ENST00000531290 NEUROD2Q15784 382 aa29.23■■■□□ 2.27
TRAPPC4-210ENST00000531290 CCDC146Q8IYE0 955 aa29.23■■■□□ 2.27
TRAPPC4-210ENST00000531290 ERBB4Q15303 1308 aa29.22■■■□□ 2.27
TRAPPC4-210ENST00000531290 EIF2S2P20042 333 aaKnown RBP29.22■■■□□ 2.27
TRAPPC4-210ENST00000531290 LTBP3Q9NS15 1303 aa29.21■■■□□ 2.27
TRAPPC4-210ENST00000531290 DLEC1Q9Y238 1755 aa29.21■■■□□ 2.27
TRAPPC4-210ENST00000531290 ZBTB3Q9H5J0 574 aa29.21■■■□□ 2.27
TRAPPC4-210ENST00000531290 RUNDC1Q96C34 613 aa29.2■■■□□ 2.26
TRAPPC4-210ENST00000531290 BCORQ6W2J9 1755 aa29.2■■■□□ 2.26
TRAPPC4-210ENST00000531290 ALDH1B1P30837 517 aa29.19■■■□□ 2.26
TRAPPC4-210ENST00000531290 CCDC93Q567U6 631 aa29.19■■■□□ 2.26
TRAPPC4-210ENST00000531290 C7orf43Q8WVR3 580 aa29.19■■■□□ 2.26
TRAPPC4-210ENST00000531290 ANKRD31Q8N7Z5 1873 aa29.19■■■□□ 2.26
TRAPPC4-210ENST00000531290 GPTP24298 496 aa29.18■■■□□ 2.26
TRAPPC4-210ENST00000531290 SMC1BQ8NDV3 1235 aa29.18■■■□□ 2.26
TRAPPC4-210ENST00000531290 NUTM1Q86Y26 1132 aa29.17■■■□□ 2.26
TRAPPC4-210ENST00000531290 ADAMTS8Q9UP79 889 aa29.16■■■□□ 2.26
TRAPPC4-210ENST00000531290 GIGYF2Q6Y7W6 1299 aaKnown RBP29.15■■■□□ 2.26
TRAPPC4-210ENST00000531290 LAS1LQ9Y4W2 734 aaKnown RBP29.15■■■□□ 2.26
TRAPPC4-210ENST00000531290 KDM3BQ7LBC6 1761 aa29.14■■■□□ 2.26
TRAPPC4-210ENST00000531290 RTKN2Q8IZC4 609 aa29.14■■■□□ 2.26
TRAPPC4-210ENST00000531290 SBF1O95248 1867 aa29.14■■■□□ 2.26
TRAPPC4-210ENST00000531290 DLG5Q8TDM6 1919 aa29.14■■■□□ 2.25
TRAPPC4-210ENST00000531290 PDIA6Q15084 440 aa29.13■■■□□ 2.25
TRAPPC4-210ENST00000531290 SUSD4Q5VX71 490 aa29.13■■■□□ 2.25
TRAPPC4-210ENST00000531290 ZNF34Q8IZ26 560 aa29.13■■■□□ 2.25
TRAPPC4-210ENST00000531290 PRKRIP1Q9H875 184 aaPredicted RBP29.13■■■□□ 2.25
TRAPPC4-210ENST00000531290 COL11A2P13942 1736 aaPredicted RBP29.13■■■□□ 2.25
TRAPPC4-210ENST00000531290 UBN2Q6ZU65 1347 aa29.12■■■□□ 2.25
TRAPPC4-210ENST00000531290 CHL1O00533 1208 aa29.11■■■□□ 2.25
TRAPPC4-210ENST00000531290 FKBP4Q02790 459 aaKnown RBP eCLIP29.11■■■□□ 2.25
TRAPPC4-210ENST00000531290 CRY2Q49AN0 593 aa29.11■■■□□ 2.25
TRAPPC4-210ENST00000531290 PPP1R42Q7Z4L9 355 aa29.11■■■□□ 2.25
TRAPPC4-210ENST00000531290 NECTIN2Q92692 538 aa29.11■■■□□ 2.25
TRAPPC4-210ENST00000531290 RPGRQ92834 1020 aaKnown RBP29.11■■■□□ 2.25
TRAPPC4-210ENST00000531290 TRIM35Q9UPQ4 493 aa29.11■■■□□ 2.25
TRAPPC4-210ENST00000531290 LAMB4A4D0S4 1761 aa29.11■■■□□ 2.25
TRAPPC4-210ENST00000531290 ANXA1P04083 346 aa29.1■■■□□ 2.25
TRAPPC4-210ENST00000531290 PARP10Q53GL7 1025 aa29.1■■■□□ 2.25
TRAPPC4-210ENST00000531290 LRP10Q7Z4F1 713 aa29.1■■■□□ 2.25
TRAPPC4-210ENST00000531290 DNAJC5GQ8N7S2 189 aa29.1■■■□□ 2.25
TRAPPC4-210ENST00000531290 ABCC12Q96J65 1359 aa29.1■■■□□ 2.25
TRAPPC4-210ENST00000531290 PROSER3Q2NL68 480 aa29.09■■■□□ 2.25
TRAPPC4-210ENST00000531290 OLFM4Q6UX06 510 aa29.09■■■□□ 2.25
TRAPPC4-210ENST00000531290 IBTKQ9P2D0 1353 aaPredicted RBP29.09■■■□□ 2.25
TRAPPC4-210ENST00000531290 POTECB2RU33 542 aa29.08■■■□□ 2.25
TRAPPC4-210ENST00000531290 DDNO94850 711 aaPredicted RBP29.08■■■□□ 2.25
TRAPPC4-210ENST00000531290 ZNF277Q9NRM2 450 aaPredicted RBP29.08■■■□□ 2.25
TRAPPC4-210ENST00000531290 SLX4Q8IY92 1834 aa29.08■■■□□ 2.25
TRAPPC4-210ENST00000531290 AIMP1Q12904 312 aaKnown RBP29.07■■■□□ 2.24
TRAPPC4-210ENST00000531290 COPS6Q7L5N1 327 aa29.07■■■□□ 2.24
TRAPPC4-210ENST00000531290 TNRC6CQ9HCJ0 1690 aaKnown RBP29.06■■■□□ 2.24
TRAPPC4-210ENST00000531290 NTSR2O95665 410 aa29.06■■■□□ 2.24
TRAPPC4-210ENST00000531290 HOXA10P31260 410 aaPredicted RBP29.06■■■□□ 2.24
TRAPPC4-210ENST00000531290 HTRA3P83110 453 aa29.06■■■□□ 2.24
TRAPPC4-210ENST00000531290 RBM17Q96I25 401 aaKnown RBP29.06■■■□□ 2.24
TRAPPC4-210ENST00000531290 UTP14AQ9BVJ6 771 aaKnown RBP29.06■■■□□ 2.24
TRAPPC4-210ENST00000531290 KRT24Q2M2I5 525 aa29.05■■■□□ 2.24
TRAPPC4-210ENST00000531290 HSP90AB3PQ58FF7 597 aa29.05■■■□□ 2.24
TRAPPC4-210ENST00000531290 CC2D2BQ6DHV5 1058 aa29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms