RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 RGL2O15211 777 aa19.7■□□□□ 0.74
CCS-206ENST00000530961 GYS1P13807 737 aa19.7■□□□□ 0.74
CCS-206ENST00000530961 JMYQ8N9B5 988 aa19.7■□□□□ 0.74
CCS-206ENST00000530961 WWC3Q9ULE0 1092 aa19.7■□□□□ 0.74
CCS-206ENST00000530961 TBC1D2BQ9UPU7 963 aa19.7■□□□□ 0.74
CCS-206ENST00000530961 TJP1Q07157 1748 aa19.7■□□□□ 0.74
CCS-206ENST00000530961 ZBED9Q6R2W3 1325 aa19.7■□□□□ 0.74
CCS-206ENST00000530961 KDM3BQ7LBC6 1761 aa19.7■□□□□ 0.74
CCS-206ENST00000530961 KIF3CO14782 793 aa19.69■□□□□ 0.74
CCS-206ENST00000530961 VAMP4O75379 141 aa19.69■□□□□ 0.74
CCS-206ENST00000530961 USPL1Q5W0Q7 1092 aa19.69■□□□□ 0.74
CCS-206ENST00000530961 LRP10Q7Z4F1 713 aa19.69■□□□□ 0.74
CCS-206ENST00000530961 HYPKQ9NX55 129 aa19.69■□□□□ 0.74
CCS-206ENST00000530961 CHPF2Q9P2E5 772 aa19.69■□□□□ 0.74
CCS-206ENST00000530961 SRP68Q9UHB9 627 aaKnown RBP19.69■□□□□ 0.74
CCS-206ENST00000530961 CAMTA2O94983 1202 aa19.68■□□□□ 0.74
CCS-206ENST00000530961 MSL1Q68DK7 614 aa19.68■□□□□ 0.74
CCS-206ENST00000530961 CLEC4GQ6UXB4 293 aa19.68■□□□□ 0.74
CCS-206ENST00000530961 KLRG1Q96E93 195 aa19.68■□□□□ 0.74
CCS-206ENST00000530961 ERVV-1B6SEH8 477 aa19.67■□□□□ 0.74
CCS-206ENST00000530961 PROSER3Q2NL68 480 aa19.67■□□□□ 0.74
CCS-206ENST00000530961 KIF6Q6ZMV9 814 aa19.67■□□□□ 0.74
CCS-206ENST00000530961 STK31Q9BXU1 1019 aa19.67■□□□□ 0.74
CCS-206ENST00000530961 FKBP8Q14318 412 aa19.66■□□□□ 0.74
CCS-206ENST00000530961 ZNF652Q9Y2D9 606 aa19.66■□□□□ 0.74
CCS-206ENST00000530961 COL5A3P25940 1745 aaPredicted RBP19.65■□□□□ 0.74
CCS-206ENST00000530961 ANXA1P04083 346 aa19.65■□□□□ 0.74
CCS-206ENST00000530961 CT47B1P0C2W7 299 aaPredicted RBP19.65■□□□□ 0.74
CCS-206ENST00000530961 COPS6Q7L5N1 327 aa19.65■□□□□ 0.74
CCS-206ENST00000530961 ZNF428Q96B54 188 aa19.65■□□□□ 0.74
CCS-206ENST00000530961 BCL2L12Q9HB09 334 aa19.65■□□□□ 0.74
CCS-206ENST00000530961 TOMM70O94826 608 aa19.64■□□□□ 0.73
CCS-206ENST00000530961 TM4SF1P30408 202 aa19.64■□□□□ 0.73
CCS-206ENST00000530961 TTLL7Q6ZT98 887 aa19.64■□□□□ 0.73
CCS-206ENST00000530961 XAGE3Q8WTP9 111 aa19.64■□□□□ 0.73
CCS-206ENST00000530961 MAP3K15Q6ZN16 1313 aa19.64■□□□□ 0.73
CCS-206ENST00000530961 TAF1LQ8IZX4 1826 aa19.64■□□□□ 0.73
CCS-206ENST00000530961 MMP10P09238 476 aa19.63■□□□□ 0.73
CCS-206ENST00000530961 VIRMAQ69YN4 1812 aaKnown RBP19.62■□□□□ 0.73
CCS-206ENST00000530961 SLC4A2P04920 1241 aa19.62■□□□□ 0.73
CCS-206ENST00000530961 AIMP1Q12904 312 aaKnown RBP19.62■□□□□ 0.73
CCS-206ENST00000530961 PARP3Q9Y6F1 533 aa19.62■□□□□ 0.73
CCS-206ENST00000530961 NFIXQ14938 502 aa19.61■□□□□ 0.73
CCS-206ENST00000530961 ANKRD13DQ6ZTN6 518 aa19.61■□□□□ 0.73
CCS-206ENST00000530961 TBC1D9BQ66K14 1250 aa19.6■□□□□ 0.73
CCS-206ENST00000530961 PLBD2Q8NHP8 589 aa19.6■□□□□ 0.73
CCS-206ENST00000530961 SETDB2Q96T68 719 aa19.6■□□□□ 0.73
CCS-206ENST00000530961 ZBTB3Q9H5J0 574 aa19.6■□□□□ 0.73
CCS-206ENST00000530961 TCERG1O14776 1098 aaKnown RBP19.59■□□□□ 0.73
CCS-206ENST00000530961 DDX58O95786 925 aaKnown RBP19.59■□□□□ 0.73
CCS-206ENST00000530961 HLFQ16534 295 aa19.59■□□□□ 0.73
CCS-206ENST00000530961 HSP90AB3PQ58FF7 597 aa19.59■□□□□ 0.73
CCS-206ENST00000530961 GIGYF2Q6Y7W6 1299 aaKnown RBP19.59■□□□□ 0.73
CCS-206ENST00000530961 PHAXQ9H814 394 aaKnown RBP19.59■□□□□ 0.73
CCS-206ENST00000530961 QSER1Q2KHR3 1735 aa19.59■□□□□ 0.73
CCS-206ENST00000530961 MYH14Q7Z406 1995 aaKnown RBP19.59■□□□□ 0.73
CCS-206ENST00000530961 UBR3Q6ZT12 1888 aa19.58■□□□□ 0.73
CCS-206ENST00000530961 POLRMTO00411 1230 aaKnown RBP19.58■□□□□ 0.72
CCS-206ENST00000530961 BICDL1Q6ZP65 573 aa19.58■□□□□ 0.72
CCS-206ENST00000530961 WDR90Q96KV7 1748 aa19.58■□□□□ 0.72
CCS-206ENST00000530961 DDR1Q08345 913 aa19.57■□□□□ 0.72
CCS-206ENST00000530961 NIP7Q9Y221 180 aaKnown RBP eCLIP19.57■□□□□ 0.72
CCS-206ENST00000530961 SERPINB2P05120 415 aa19.56■□□□□ 0.72
CCS-206ENST00000530961 ALDH1L2Q3SY69 923 aa19.56■□□□□ 0.72
CCS-206ENST00000530961 RIC3Q7Z5B4 369 aa19.56■□□□□ 0.72
CCS-206ENST00000530961 FLIIQ13045 1269 aa19.55■□□□□ 0.72
CCS-206ENST00000530961 TCIRG1Q13488 830 aa19.55■□□□□ 0.72
CCS-206ENST00000530961 CD2APQ9Y5K6 639 aa19.55■□□□□ 0.72
CCS-206ENST00000530961 COL24A1Q17RW2 1714 aa19.54■□□□□ 0.72
CCS-206ENST00000530961 KSR2Q6VAB6 950 aa19.54■□□□□ 0.72
CCS-206ENST00000530961 ZNF34Q8IZ26 560 aa19.54■□□□□ 0.72
CCS-206ENST00000530961 CARMIL3Q8ND23 1372 aa19.54■□□□□ 0.72
CCS-206ENST00000530961 LAMB4A4D0S4 1761 aa19.53■□□□□ 0.72
CCS-206ENST00000530961 PARP10Q53GL7 1025 aa19.53■□□□□ 0.72
CCS-206ENST00000530961 TPTE2Q6XPS3 522 aa19.53■□□□□ 0.72
CCS-206ENST00000530961 G2E3Q7L622 706 aa19.53■□□□□ 0.72
CCS-206ENST00000530961 SSH1Q8WYL5 1049 aa19.53■□□□□ 0.72
CCS-206ENST00000530961 FKBP5Q13451 457 aaPredicted RBP19.52■□□□□ 0.72
CCS-206ENST00000530961 NBPF5PQ86XG9 351 aaPredicted RBP19.52■□□□□ 0.72
CCS-206ENST00000530961 MRPL50Q8N5N7 158 aaKnown RBP19.52■□□□□ 0.72
CCS-206ENST00000530961 PI4KAP2A4QPH2 592 aa19.51■□□□□ 0.71
CCS-206ENST00000530961 GPTP24298 496 aa19.51■□□□□ 0.71
CCS-206ENST00000530961 BRPF1P55201 1214 aaPredicted RBP19.51■□□□□ 0.71
CCS-206ENST00000530961 HTRA3P83110 453 aa19.51■□□□□ 0.71
CCS-206ENST00000530961 TRIM28Q13263 835 aaKnown RBP19.51■□□□□ 0.71
CCS-206ENST00000530961 PI4KAP1Q8N8J0 262 aa19.51■□□□□ 0.71
CCS-206ENST00000530961 NYXQ9GZU5 481 aa19.51■□□□□ 0.71
CCS-206ENST00000530961 MAP3K2Q9Y2U5 619 aa19.51■□□□□ 0.71
CCS-206ENST00000530961 TUBGCP6Q96RT7 1819 aa19.51■□□□□ 0.71
CCS-206ENST00000530961 NPHP1O15259 732 aa19.5■□□□□ 0.71
CCS-206ENST00000530961 RARSP54136 660 aaKnown RBP19.5■□□□□ 0.71
CCS-206ENST00000530961 PPP1R42Q7Z4L9 355 aa19.5■□□□□ 0.71
CCS-206ENST00000530961 CNBD1Q8NA66 436 aa19.5■□□□□ 0.71
CCS-206ENST00000530961 METTL22Q9BUU2 404 aaPredicted RBP19.5■□□□□ 0.71
CCS-206ENST00000530961 SMC4Q9NTJ3 1288 aa19.5■□□□□ 0.71
CCS-206ENST00000530961 TGFB2P61812 414 aa19.49■□□□□ 0.71
CCS-206ENST00000530961 PRR5LQ6MZQ0 368 aa19.49■□□□□ 0.71
CCS-206ENST00000530961 RBM46Q8TBY0 533 aaKnown RBP19.49■□□□□ 0.71
CCS-206ENST00000530961 YTHDC1Q96MU7 727 aaKnown RBP19.49■□□□□ 0.71
CCS-206ENST00000530961 ISCA1Q9BUE6 129 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms