RNA–Protein interactions for RNA: ENST00000530887.5

PSMC3-208, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 2

Gene PSMC3, Length 891 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-208ENST00000530887 BCORQ6W2J9 1755 aa24.21■■□□□ 1.47
PSMC3-208ENST00000530887 JMYQ8N9B5 988 aa24.21■■□□□ 1.47
PSMC3-208ENST00000530887 PNNQ9H307 717 aaKnown RBP24.21■■□□□ 1.47
PSMC3-208ENST00000530887 SRGNP10124 158 aa24.2■■□□□ 1.46
PSMC3-208ENST00000530887 ERFEQ4G0M1 354 aa24.2■■□□□ 1.46
PSMC3-208ENST00000530887 TPTE2Q6XPS3 522 aa24.2■■□□□ 1.46
PSMC3-208ENST00000530887 NBPF5PQ86XG9 351 aaPredicted RBP24.2■■□□□ 1.46
PSMC3-208ENST00000530887 USP16Q9Y5T5 823 aa24.2■■□□□ 1.46
PSMC3-208ENST00000530887 TIAM2Q8IVF5 1701 aa24.2■■□□□ 1.46
PSMC3-208ENST00000530887 DICER1Q9UPY3 1922 aaKnown RBP24.2■■□□□ 1.46
PSMC3-208ENST00000530887 CCDC88AQ3V6T2 1871 aa24.19■■□□□ 1.46
PSMC3-208ENST00000530887 C21orf2O43822 256 aa24.19■■□□□ 1.46
PSMC3-208ENST00000530887 TAF7Q15545 349 aaPredicted RBP24.19■■□□□ 1.46
PSMC3-208ENST00000530887 FER1L6Q2WGJ9 1857 aa24.19■■□□□ 1.46
PSMC3-208ENST00000530887 KCNQ3O43525 872 aa24.17■■□□□ 1.46
PSMC3-208ENST00000530887 ARFGEF2Q9Y6D5 1785 aa24.16■■□□□ 1.46
PSMC3-208ENST00000530887 NPR1P16066 1061 aa24.16■■□□□ 1.46
PSMC3-208ENST00000530887 PRPF40BQ6NWY9 871 aaKnown RBP24.16■■□□□ 1.46
PSMC3-208ENST00000530887 MCM10Q7L590 875 aa24.16■■□□□ 1.46
PSMC3-208ENST00000530887 PRELPP51888 382 aa24.15■■□□□ 1.46
PSMC3-208ENST00000530887 COL11A2P13942 1736 aaPredicted RBP24.15■■□□□ 1.46
PSMC3-208ENST00000530887 KLRG2A4D1S0 409 aaPredicted RBP24.14■■□□□ 1.45
PSMC3-208ENST00000530887 CCDC93Q567U6 631 aa24.14■■□□□ 1.45
PSMC3-208ENST00000530887 IQCA1LA6NCM1 817 aa24.13■■□□□ 1.45
PSMC3-208ENST00000530887 NIP7Q9Y221 180 aaKnown RBP eCLIP24.13■■□□□ 1.45
PSMC3-208ENST00000530887 ALDH1B1P30837 517 aa24.12■■□□□ 1.45
PSMC3-208ENST00000530887 NYXQ9GZU5 481 aa24.12■■□□□ 1.45
PSMC3-208ENST00000530887 RTKN2Q8IZC4 609 aa24.11■■□□□ 1.45
PSMC3-208ENST00000530887 ERVV-1B6SEH8 477 aa24.1■■□□□ 1.45
PSMC3-208ENST00000530887 GTF2E1P29083 439 aaPredicted RBP24.1■■□□□ 1.45
PSMC3-208ENST00000530887 ZNF219Q9P2Y4 722 aaPredicted RBP24.1■■□□□ 1.45
PSMC3-208ENST00000530887 GRIPAP1Q4V328 841 aa24.09■■□□□ 1.45
PSMC3-208ENST00000530887 CCDC24Q8N4L8 307 aa24.09■■□□□ 1.45
PSMC3-208ENST00000530887 SLX4Q8IY92 1834 aa24.09■■□□□ 1.45
PSMC3-208ENST00000530887 LAMB4A4D0S4 1761 aa24.08■■□□□ 1.45
PSMC3-208ENST00000530887 FKBP4Q02790 459 aaKnown RBP eCLIP24.08■■□□□ 1.45
PSMC3-208ENST00000530887 ERBB4Q15303 1308 aa24.08■■□□□ 1.44
PSMC3-208ENST00000530887 PRAMEF22A3QJZ6 481 aa24.07■■□□□ 1.44
PSMC3-208ENST00000530887 POTECB2RU33 542 aa24.07■■□□□ 1.44
PSMC3-208ENST00000530887 NBPF26B4DH59 902 aa24.07■■□□□ 1.44
PSMC3-208ENST00000530887 DCTN1Q14203 1278 aa24.07■■□□□ 1.44
PSMC3-208ENST00000530887 CC2D2BQ6DHV5 1058 aa24.07■■□□□ 1.44
PSMC3-208ENST00000530887 CHADLQ6NUI6 762 aa24.07■■□□□ 1.44
PSMC3-208ENST00000530887 NBPF10Q6P3W6 841 aaKnown RBP24.07■■□□□ 1.44
PSMC3-208ENST00000530887 NBPF15Q8N660 670 aa24.07■■□□□ 1.44
PSMC3-208ENST00000530887 C7orf43Q8WVR3 580 aa24.07■■□□□ 1.44
PSMC3-208ENST00000530887 MAPK8IP3Q9UPT6 1336 aa24.07■■□□□ 1.44
PSMC3-208ENST00000530887 IBTKQ9P2D0 1353 aaPredicted RBP24.06■■□□□ 1.44
PSMC3-208ENST00000530887 KIF6Q6ZMV9 814 aa24.06■■□□□ 1.44
PSMC3-208ENST00000530887 L3MBTL3Q96JM7 780 aaPredicted RBP24.06■■□□□ 1.44
PSMC3-208ENST00000530887 PIP4K2AP48426 406 aaPredicted RBP24.05■■□□□ 1.44
PSMC3-208ENST00000530887 HTRA3P83110 453 aa24.05■■□□□ 1.44
PSMC3-208ENST00000530887 NFE2L2Q16236 605 aa24.05■■□□□ 1.44
PSMC3-208ENST00000530887 CREBZFQ9NS37 354 aa24.04■■□□□ 1.44
PSMC3-208ENST00000530887 SCN4AP35499 1836 aa24.04■■□□□ 1.44
PSMC3-208ENST00000530887 CACNA1SQ13698 1873 aa24.04■■□□□ 1.44
PSMC3-208ENST00000530887 RIC1Q4ADV7 1423 aa24.03■■□□□ 1.44
PSMC3-208ENST00000530887 LDHDQ86WU2 507 aa24.03■■□□□ 1.44
PSMC3-208ENST00000530887 BABAM1Q9NWV8 329 aa24.03■■□□□ 1.44
PSMC3-208ENST00000530887 MAP3K15Q6ZN16 1313 aa24.03■■□□□ 1.44
PSMC3-208ENST00000530887 DDNO94850 711 aaPredicted RBP24.02■■□□□ 1.44
PSMC3-208ENST00000530887 KDM3BQ7LBC6 1761 aa24.01■■□□□ 1.43
PSMC3-208ENST00000530887 EIF4A1P60842 406 aaKnown RBP24.01■■□□□ 1.43
PSMC3-208ENST00000530887 CRY2Q49AN0 593 aa24.01■■□□□ 1.43
PSMC3-208ENST00000530887 PLEKHF1Q96S99 279 aa24.01■■□□□ 1.43
PSMC3-208ENST00000530887 PSMD1Q99460 953 aa24.01■■□□□ 1.43
PSMC3-208ENST00000530887 DLG5Q8TDM6 1919 aa24■■□□□ 1.43
PSMC3-208ENST00000530887 LMOD3Q0VAK6 560 aa23.99■■□□□ 1.43
PSMC3-208ENST00000530887 HLFQ16534 295 aa23.99■■□□□ 1.43
PSMC3-208ENST00000530887 PNMA8AQ86V59 439 aaPredicted RBP23.99■■□□□ 1.43
PSMC3-208ENST00000530887 IARSP41252 1262 aaKnown RBP23.98■■□□□ 1.43
PSMC3-208ENST00000530887 PARP10Q53GL7 1025 aa23.98■■□□□ 1.43
PSMC3-208ENST00000530887 JDP2Q8WYK2 163 aa23.98■■□□□ 1.43
PSMC3-208ENST00000530887 TMX4Q9H1E5 349 aaPredicted RBP23.98■■□□□ 1.43
PSMC3-208ENST00000530887 RALBP1Q15311 655 aa23.97■■□□□ 1.43
PSMC3-208ENST00000530887 PPP1R42Q7Z4L9 355 aa23.97■■□□□ 1.43
PSMC3-208ENST00000530887 RPGRQ92834 1020 aaKnown RBP23.97■■□□□ 1.43
PSMC3-208ENST00000530887 TAF1DQ9H5J8 278 aaPredicted RBP23.97■■□□□ 1.43
PSMC3-208ENST00000530887 MIS18AQ9NYP9 233 aa23.97■■□□□ 1.43
PSMC3-208ENST00000530887 HACL1Q9UJ83 578 aa23.97■■□□□ 1.43
PSMC3-208ENST00000530887 RNF123Q5XPI4 1314 aa23.96■■□□□ 1.43
PSMC3-208ENST00000530887 FAM177BA6PVY3 158 aa23.96■■□□□ 1.43
PSMC3-208ENST00000530887 HOXA10P31260 410 aaPredicted RBP23.96■■□□□ 1.43
PSMC3-208ENST00000530887 RRP7AQ9Y3A4 280 aaKnown RBP23.96■■□□□ 1.43
PSMC3-208ENST00000530887 NUP98P52948 1817 aa23.96■■□□□ 1.43
PSMC3-208ENST00000530887 FZD9O00144 591 aa23.95■■□□□ 1.42
PSMC3-208ENST00000530887 GIGYF2Q6Y7W6 1299 aaKnown RBP23.95■■□□□ 1.42
PSMC3-208ENST00000530887 GPC2Q8N158 579 aa23.95■■□□□ 1.42
PSMC3-208ENST00000530887 SYNE4Q8N205 404 aa23.95■■□□□ 1.42
PSMC3-208ENST00000530887 RBM17Q96I25 401 aaKnown RBP23.95■■□□□ 1.42
PSMC3-208ENST00000530887 ZNF277Q9NRM2 450 aaPredicted RBP23.95■■□□□ 1.42
PSMC3-208ENST00000530887 CRAMP1Q96RY5 1269 aa23.94■■□□□ 1.42
PSMC3-208ENST00000530887 VPS33BQ9H267 617 aa23.94■■□□□ 1.42
PSMC3-208ENST00000530887 TSPYL4Q9UJ04 414 aa23.94■■□□□ 1.42
PSMC3-208ENST00000530887 HSPA1AP0DMV8 641 aaKnown RBP23.93■■□□□ 1.42
PSMC3-208ENST00000530887 HSPA1BP0DMV9 641 aaKnown RBP23.93■■□□□ 1.42
PSMC3-208ENST00000530887 EIF6P56537 245 aaKnown RBP23.93■■□□□ 1.42
PSMC3-208ENST00000530887 NGEFQ8N5V2 710 aa23.93■■□□□ 1.42
PSMC3-208ENST00000530887 PASKQ96RG2 1323 aa23.92■■□□□ 1.42
PSMC3-208ENST00000530887 MYL6BP14649 208 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms