RNA–Protein interactions for RNA: ENST00000530640.6

CTSB-219, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-219ENST00000530640 NFIXQ14938 502 aa20.22■□□□□ 0.83
CTSB-219ENST00000530640 DUSP27Q5VZP5 1158 aa20.22■□□□□ 0.83
CTSB-219ENST00000530640 RNF181Q9P0P0 153 aa20.22■□□□□ 0.83
CTSB-219ENST00000530640 SCN7AQ01118 1682 aa20.22■□□□□ 0.83
CTSB-219ENST00000530640 IFT57Q9NWB7 429 aa20.21■□□□□ 0.83
CTSB-219ENST00000530640 SERPINB2P05120 415 aa20.21■□□□□ 0.83
CTSB-219ENST00000530640 DNAJC5GQ8N7S2 189 aa20.21■□□□□ 0.83
CTSB-219ENST00000530640 ZNF330Q9Y3S2 320 aaPredicted RBP20.21■□□□□ 0.83
CTSB-219ENST00000530640 FANCIQ9NVI1 1328 aa20.2■□□□□ 0.82
CTSB-219ENST00000530640 EIF5P55010 431 aaKnown RBP20.2■□□□□ 0.82
CTSB-219ENST00000530640 TTLL6Q8N841 843 aa20.2■□□□□ 0.82
CTSB-219ENST00000530640 CFAP44Q96MT7 982 aa20.2■□□□□ 0.82
CTSB-219ENST00000530640 H0YIN7 160 aa20.19■□□□□ 0.82
CTSB-219ENST00000530640 LMNB1P20700 586 aa20.19■□□□□ 0.82
CTSB-219ENST00000530640 TAF7Q15545 349 aaPredicted RBP20.19■□□□□ 0.82
CTSB-219ENST00000530640 NPM2Q86SE8 214 aaKnown RBP20.19■□□□□ 0.82
CTSB-219ENST00000530640 MYH16Q9H6N6 1097 aa20.19■□□□□ 0.82
CTSB-219ENST00000530640 LAMB4A4D0S4 1761 aa20.18■□□□□ 0.82
CTSB-219ENST00000530640 IL6STP40189 918 aaPredicted RBP20.18■□□□□ 0.82
CTSB-219ENST00000530640 GNAI1P63096 354 aa20.18■□□□□ 0.82
CTSB-219ENST00000530640 CHL1O00533 1208 aa20.17■□□□□ 0.82
CTSB-219ENST00000530640 A1BGP04217 495 aa20.17■□□□□ 0.82
CTSB-219ENST00000530640 SNRPA1P09661 255 aaKnown RBP20.17■□□□□ 0.82
CTSB-219ENST00000530640 BCL2L12Q9HB09 334 aa20.17■□□□□ 0.82
CTSB-219ENST00000530640 AFDNP55196 1824 aaKnown RBP20.17■□□□□ 0.82
CTSB-219ENST00000530640 NRXN2Q9P2S2 1712 aa20.16■□□□□ 0.82
CTSB-219ENST00000530640 PRAMEF22A3QJZ6 481 aa20.16■□□□□ 0.82
CTSB-219ENST00000530640 SMC1BQ8NDV3 1235 aa20.16■□□□□ 0.82
CTSB-219ENST00000530640 RRAGCQ9HB90 399 aa20.16■□□□□ 0.82
CTSB-219ENST00000530640 MBIPQ9NS73 344 aa20.16■□□□□ 0.82
CTSB-219ENST00000530640 BABAM1Q9NWV8 329 aa20.16■□□□□ 0.82
CTSB-219ENST00000530640 USP16Q9Y5T5 823 aa20.16■□□□□ 0.82
CTSB-219ENST00000530640 BCORQ6W2J9 1755 aa20.16■□□□□ 0.82
CTSB-219ENST00000530640 PDE6BP35913 854 aa20.15■□□□□ 0.82
CTSB-219ENST00000530640 C2CD5Q86YS7 1000 aa20.15■□□□□ 0.82
CTSB-219ENST00000530640 TSR2Q969E8 191 aaKnown RBP20.15■□□□□ 0.82
CTSB-219ENST00000530640 GLTPD2A6NH11 291 aa20.14■□□□□ 0.81
CTSB-219ENST00000530640 BRIP1Q9BX63 1249 aa20.14■□□□□ 0.81
CTSB-219ENST00000530640 MIS18AQ9NYP9 233 aa20.14■□□□□ 0.81
CTSB-219ENST00000530640 SBF1O95248 1867 aa20.14■□□□□ 0.81
CTSB-219ENST00000530640 VEGFAP15692 232 aaPredicted RBP20.13■□□□□ 0.81
CTSB-219ENST00000530640 TBC1D2BQ9UPU7 963 aa20.13■□□□□ 0.81
CTSB-219ENST00000530640 TNRC6CQ9HCJ0 1690 aaKnown RBP20.12■□□□□ 0.81
CTSB-219ENST00000530640 PIP4K2AP48426 406 aaPredicted RBP20.12■□□□□ 0.81
CTSB-219ENST00000530640 BICDL1Q6ZP65 573 aa20.12■□□□□ 0.81
CTSB-219ENST00000530640 KLRG1Q96E93 195 aa20.12■□□□□ 0.81
CTSB-219ENST00000530640 DPY19L2Q6NUT2 758 aa20.11■□□□□ 0.81
CTSB-219ENST00000530640 DZIP3Q86Y13 1208 aaKnown RBP20.11■□□□□ 0.81
CTSB-219ENST00000530640 TBC1D9BQ66K14 1250 aa20.1■□□□□ 0.81
CTSB-219ENST00000530640 JMYQ8N9B5 988 aa20.1■□□□□ 0.81
CTSB-219ENST00000530640 TSPYL4Q9UJ04 414 aa20.1■□□□□ 0.81
CTSB-219ENST00000530640 LAS1LQ9Y4W2 734 aaKnown RBP20.1■□□□□ 0.81
CTSB-219ENST00000530640 CARMIL3Q8ND23 1372 aa20.1■□□□□ 0.81
CTSB-219ENST00000530640 DLEC1Q9Y238 1755 aa20.1■□□□□ 0.81
CTSB-219ENST00000530640 CAMTA2O94983 1202 aa20.09■□□□□ 0.81
CTSB-219ENST00000530640 SETDB2Q96T68 719 aa20.09■□□□□ 0.81
CTSB-219ENST00000530640 RGL2O15211 777 aa20.08■□□□□ 0.81
CTSB-219ENST00000530640 SOGA3Q5TF21 947 aa20.08■□□□□ 0.81
CTSB-219ENST00000530640 CT47B1P0C2W7 299 aaPredicted RBP20.08■□□□□ 0.8
CTSB-219ENST00000530640 EIF4A1P60842 406 aaKnown RBP20.08■□□□□ 0.8
CTSB-219ENST00000530640 RASSF7Q02833 373 aa20.08■□□□□ 0.8
CTSB-219ENST00000530640 CLEC4GQ6UXB4 293 aa20.08■□□□□ 0.8
CTSB-219ENST00000530640 CNKSR1Q969H4 720 aa20.08■□□□□ 0.8
CTSB-219ENST00000530640 WDR90Q96KV7 1748 aa20.07■□□□□ 0.8
CTSB-219ENST00000530640 NBPF26B4DH59 902 aa20.07■□□□□ 0.8
CTSB-219ENST00000530640 EXOSC9Q06265 439 aaKnown RBP20.07■□□□□ 0.8
CTSB-219ENST00000530640 PRR5LQ6MZQ0 368 aa20.07■□□□□ 0.8
CTSB-219ENST00000530640 NBPF10Q6P3W6 841 aaKnown RBP20.07■□□□□ 0.8
CTSB-219ENST00000530640 NBPF15Q8N660 670 aa20.07■□□□□ 0.8
CTSB-219ENST00000530640 ZNF622Q969S3 477 aaKnown RBP eCLIP20.07■□□□□ 0.8
CTSB-219ENST00000530640 LTBP3Q9NS15 1303 aa20.06■□□□□ 0.8
CTSB-219ENST00000530640 ST5P78524 1137 aa20.06■□□□□ 0.8
CTSB-219ENST00000530640 ZNF652Q9Y2D9 606 aa20.06■□□□□ 0.8
CTSB-219ENST00000530640 NFKBIEO00221 500 aa20.05■□□□□ 0.8
CTSB-219ENST00000530640 NPHP1O15259 732 aa20.05■□□□□ 0.8
CTSB-219ENST00000530640 STYK1Q6J9G0 422 aa20.05■□□□□ 0.8
CTSB-219ENST00000530640 CNBD1Q8NA66 436 aa20.05■□□□□ 0.8
CTSB-219ENST00000530640 ANKRD31Q8N7Z5 1873 aa20.05■□□□□ 0.8
CTSB-219ENST00000530640 ERFEQ4G0M1 354 aa20.03■□□□□ 0.8
CTSB-219ENST00000530640 C8orf58Q8NAV2 365 aa20.03■□□□□ 0.8
CTSB-219ENST00000530640 MASTLQ96GX5 879 aa20.03■□□□□ 0.8
CTSB-219ENST00000530640 C21orf2O43822 256 aa20.02■□□□□ 0.8
CTSB-219ENST00000530640 COL11A2P13942 1736 aaPredicted RBP20.02■□□□□ 0.8
CTSB-219ENST00000530640 PRELPP51888 382 aa20.02■□□□□ 0.8
CTSB-219ENST00000530640 KRT24Q2M2I5 525 aa20.02■□□□□ 0.8
CTSB-219ENST00000530640 TSPYL6Q8N831 410 aa20.02■□□□□ 0.8
CTSB-219ENST00000530640 TAOK3Q9H2K8 898 aa20.02■□□□□ 0.8
CTSB-219ENST00000530640 RCAN3Q9UKA8 241 aa20.02■□□□□ 0.8
CTSB-219ENST00000530640 SRGNP10124 158 aa20.01■□□□□ 0.79
CTSB-219ENST00000530640 TWISTNBQ3B726 338 aaPredicted RBP20■□□□□ 0.79
CTSB-219ENST00000530640 CCDC24Q8N4L8 307 aa20■□□□□ 0.79
CTSB-219ENST00000530640 ZNF428Q96B54 188 aa20■□□□□ 0.79
CTSB-219ENST00000530640 ERBB4Q15303 1308 aa20■□□□□ 0.79
CTSB-219ENST00000530640 VAMP4O75379 141 aa19.99■□□□□ 0.79
CTSB-219ENST00000530640 HOXB7P09629 217 aa19.99■□□□□ 0.79
CTSB-219ENST00000530640 MYL6BP14649 208 aa19.99■□□□□ 0.79
CTSB-219ENST00000530640 TPTE2Q6XPS3 522 aa19.99■□□□□ 0.79
CTSB-219ENST00000530640 RNF123Q5XPI4 1314 aa19.99■□□□□ 0.79
CTSB-219ENST00000530640 NBPF5PQ86XG9 351 aaPredicted RBP19.98■□□□□ 0.79
CTSB-219ENST00000530640 NIP7Q9Y221 180 aaKnown RBP eCLIP19.98■□□□□ 0.791e-6■■■■□ 21.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms