RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 VSIG10Q8N0Z9 540 aa6.23□□□□□ -1.41
SSBP3-213ENST00000530618 ZNF496Q96IT1 587 aaPredicted RBP6.23□□□□□ -1.41
SSBP3-213ENST00000530618 RSPH6AQ9H0K4 717 aa6.23□□□□□ -1.41
SSBP3-213ENST00000530618 PIM2Q9P1W9 311 aa6.23□□□□□ -1.41
SSBP3-213ENST00000530618 LAMB2P55268 1798 aa6.22□□□□□ -1.41
SSBP3-213ENST00000530618 GNAT3A8MTJ3 354 aa6.22□□□□□ -1.41
SSBP3-213ENST00000530618 POTECB2RU33 542 aa6.22□□□□□ -1.41
SSBP3-213ENST00000530618 KCNQ3O43525 872 aa6.22□□□□□ -1.41
SSBP3-213ENST00000530618 RIPK4P57078 832 aa6.22□□□□□ -1.41
SSBP3-213ENST00000530618 HTRA3P83110 453 aa6.22□□□□□ -1.41
SSBP3-213ENST00000530618 HNRNPUQ00839 825 aaKnown RBP eCLIP6.22□□□□□ -1.41
SSBP3-213ENST00000530618 TEFQ10587 303 aa6.22□□□□□ -1.41
SSBP3-213ENST00000530618 DALRD3Q5D0E6 543 aaKnown RBP6.22□□□□□ -1.41
SSBP3-213ENST00000530618 RBM46Q8TBY0 533 aaKnown RBP6.22□□□□□ -1.41
SSBP3-213ENST00000530618 PHACTR3Q96KR7 559 aa6.22□□□□□ -1.41
SSBP3-213ENST00000530618 SCN4AP35499 1836 aa6.22□□□□□ -1.41
SSBP3-213ENST00000530618 LTBP1Q14766 1721 aa6.22□□□□□ -1.41
SSBP3-213ENST00000530618 ANKRD36CQ5JPF3 1778 aa6.21□□□□□ -1.41
SSBP3-213ENST00000530618 COL4A5P29400 1685 aa6.21□□□□□ -1.42
SSBP3-213ENST00000530618 TMPOP42166 694 aaKnown RBP6.21□□□□□ -1.42
SSBP3-213ENST00000530618 APLP1P51693 650 aa6.21□□□□□ -1.42
SSBP3-213ENST00000530618 CCDC27Q2M243 656 aa6.21□□□□□ -1.42
SSBP3-213ENST00000530618 ZNF790Q6PG37 636 aa6.21□□□□□ -1.42
SSBP3-213ENST00000530618 CCDC146Q8IYE0 955 aa6.21□□□□□ -1.42
SSBP3-213ENST00000530618 JMYQ8N9B5 988 aa6.21□□□□□ -1.42
SSBP3-213ENST00000530618 MYH16Q9H6N6 1097 aa6.21□□□□□ -1.42
SSBP3-213ENST00000530618 RNF181Q9P0P0 153 aa6.21□□□□□ -1.42
SSBP3-213ENST00000530618 ZC3H4Q9UPT8 1303 aaKnown RBP6.21□□□□□ -1.42
SSBP3-213ENST00000530618 PRAMEF22A3QJZ6 481 aa6.2□□□□□ -1.42
SSBP3-213ENST00000530618 APAF1O14727 1248 aa6.2□□□□□ -1.42
SSBP3-213ENST00000530618 CAMTA2O94983 1202 aa6.2□□□□□ -1.42
SSBP3-213ENST00000530618 SERPINB2P05120 415 aa6.2□□□□□ -1.42
SSBP3-213ENST00000530618 POTEIP0CG38 1075 aa6.2□□□□□ -1.42
SSBP3-213ENST00000530618 NEUROD2Q15784 382 aa6.2□□□□□ -1.42
SSBP3-213ENST00000530618 TBC1D9BQ66K14 1250 aa6.2□□□□□ -1.42
SSBP3-213ENST00000530618 PRR5LQ6MZQ0 368 aa6.2□□□□□ -1.42
SSBP3-213ENST00000530618 TTC5Q8N0Z6 440 aa6.2□□□□□ -1.42
SSBP3-213ENST00000530618 OTUD5Q96G74 571 aa6.2□□□□□ -1.42
SSBP3-213ENST00000530618 PLEKHF1Q96S99 279 aa6.2□□□□□ -1.42
SSBP3-213ENST00000530618 BABAM1Q9NWV8 329 aa6.2□□□□□ -1.42
SSBP3-213ENST00000530618 ZPR1O75312 459 aa6.19□□□□□ -1.42
SSBP3-213ENST00000530618 A1BGP04217 495 aa6.19□□□□□ -1.42
SSBP3-213ENST00000530618 CANXP27824 592 aaKnown RBP6.19□□□□□ -1.42
SSBP3-213ENST00000530618 FXR2P51116 673 aaKnown RBP eCLIP6.19□□□□□ -1.42
SSBP3-213ENST00000530618 GNAI1P63096 354 aa6.19□□□□□ -1.42
SSBP3-213ENST00000530618 WDR63Q8IWG1 891 aa6.19□□□□□ -1.42
SSBP3-213ENST00000530618 C7orf43Q8WVR3 580 aa6.19□□□□□ -1.42
SSBP3-213ENST00000530618 RRAGCQ9HB90 399 aa6.19□□□□□ -1.42
SSBP3-213ENST00000530618 TAF1P21675 1872 aa6.19□□□□□ -1.42
SSBP3-213ENST00000530618 IL16Q14005 1332 aa6.19□□□□□ -1.42
SSBP3-213ENST00000530618 ZBED9Q6R2W3 1325 aa6.19□□□□□ -1.42
SSBP3-213ENST00000530618 THSD7BQ9C0I4 1608 aa6.18□□□□□ -1.42
SSBP3-213ENST00000530618 NBPF26B4DH59 902 aa6.18□□□□□ -1.42
SSBP3-213ENST00000530618 E9PSI1 815 aa6.18□□□□□ -1.42
SSBP3-213ENST00000530618 CENPBP07199 599 aaPredicted RBP6.18□□□□□ -1.42
SSBP3-213ENST00000530618 LMNB1P20700 586 aa6.18□□□□□ -1.42
SSBP3-213ENST00000530618 IL6STP40189 918 aaPredicted RBP6.18□□□□□ -1.42
SSBP3-213ENST00000530618 GOLGA2Q08379 1002 aa6.18□□□□□ -1.42
SSBP3-213ENST00000530618 FSTL1Q12841 308 aa6.18□□□□□ -1.42
SSBP3-213ENST00000530618 CCDC184Q52MB2 194 aa6.18□□□□□ -1.42
SSBP3-213ENST00000530618 NBPF10Q6P3W6 841 aaKnown RBP6.18□□□□□ -1.42
SSBP3-213ENST00000530618 NPM2Q86SE8 214 aaKnown RBP6.18□□□□□ -1.42
SSBP3-213ENST00000530618 C2CD5Q86YS7 1000 aa6.18□□□□□ -1.42
SSBP3-213ENST00000530618 CCDC24Q8N4L8 307 aa6.18□□□□□ -1.42
SSBP3-213ENST00000530618 NBPF15Q8N660 670 aa6.18□□□□□ -1.42
SSBP3-213ENST00000530618 KLRG1Q96E93 195 aa6.18□□□□□ -1.42
SSBP3-213ENST00000530618 TBC1D2BQ9UPU7 963 aa6.18□□□□□ -1.42
SSBP3-213ENST00000530618 USP16Q9Y5T5 823 aa6.18□□□□□ -1.42
SSBP3-213ENST00000530618 LTBP3Q9NS15 1303 aa6.18□□□□□ -1.42
SSBP3-213ENST00000530618 TRPM7Q96QT4 1865 aa6.17□□□□□ -1.42
SSBP3-213ENST00000530618 COL4A1P02462 1669 aa6.17□□□□□ -1.42
SSBP3-213ENST00000530618 LRRC37AA6NMS7 1700 aa6.17□□□□□ -1.42
SSBP3-213ENST00000530618 DDX60Q8IY21 1712 aaKnown RBP6.17□□□□□ -1.42
SSBP3-213ENST00000530618 KLRG2A4D1S0 409 aaPredicted RBP6.17□□□□□ -1.42
SSBP3-213ENST00000530618 GLTPD2A6NH11 291 aa6.17□□□□□ -1.42
SSBP3-213ENST00000530618 POTEJP0CG39 1038 aa6.17□□□□□ -1.42
SSBP3-213ENST00000530618 SRGNP10124 158 aa6.17□□□□□ -1.42
SSBP3-213ENST00000530618 PIP4K2AP48426 406 aaPredicted RBP6.17□□□□□ -1.42
SSBP3-213ENST00000530618 TAF7Q15545 349 aaPredicted RBP6.17□□□□□ -1.42
SSBP3-213ENST00000530618 SLC51AQ86UW1 340 aa6.17□□□□□ -1.42
SSBP3-213ENST00000530618 TTLL6Q8N841 843 aa6.17□□□□□ -1.42
SSBP3-213ENST00000530618 YTHDC1Q96MU7 727 aaKnown RBP6.17□□□□□ -1.42
SSBP3-213ENST00000530618 BRIP1Q9BX63 1249 aa6.17□□□□□ -1.42
SSBP3-213ENST00000530618 IFT57Q9NWB7 429 aa6.17□□□□□ -1.42
SSBP3-213ENST00000530618 TSPYL4Q9UJ04 414 aa6.17□□□□□ -1.42
SSBP3-213ENST00000530618 SALL2Q9Y467 1007 aaPredicted RBP6.17□□□□□ -1.42
SSBP3-213ENST00000530618 LAS1LQ9Y4W2 734 aaKnown RBP6.17□□□□□ -1.42
SSBP3-213ENST00000530618 KDM2BQ8NHM5 1336 aa6.17□□□□□ -1.42
SSBP3-213ENST00000530618 ABCC12Q96J65 1359 aa6.17□□□□□ -1.42
SSBP3-213ENST00000530618 RIC1Q4ADV7 1423 aa6.16□□□□□ -1.42
SSBP3-213ENST00000530618 A0A087WZG4 1122 aa6.16□□□□□ -1.42
SSBP3-213ENST00000530618 BTBD11A6QL63 1104 aa6.16□□□□□ -1.42
SSBP3-213ENST00000530618 ABCB7O75027 752 aa6.16□□□□□ -1.42
SSBP3-213ENST00000530618 STARD3NLO95772 234 aa6.16□□□□□ -1.42
SSBP3-213ENST00000530618 DCTN1Q14203 1278 aa6.16□□□□□ -1.42
SSBP3-213ENST00000530618 COL13A1Q5TAT6 717 aaPredicted RBP6.16□□□□□ -1.42
SSBP3-213ENST00000530618 BICDL1Q6ZP65 573 aa6.16□□□□□ -1.42
SSBP3-213ENST00000530618 WWC1Q8IX03 1113 aa6.16□□□□□ -1.42
SSBP3-213ENST00000530618 CFAP44Q96MT7 982 aa6.16□□□□□ -1.42
SSBP3-213ENST00000530618 FMNL2Q96PY5 1086 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms