RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 RTCBQ9Y3I0 505 aaKnown RBP10.75□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 C5P01031 1676 aa10.75□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 BTAF1O14981 1849 aa10.74□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 EZH2Q15910 746 aaKnown RBP10.74□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 BEND3Q5T5X7 828 aa10.74□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 SMIM5Q71RC9 77 aa10.74□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 CCDC125Q86Z20 511 aa10.74□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 ADCY9O60503 1353 aa10.74□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 KAT6BQ8WYB5 2073 aa10.73□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 PHF14O94880 888 aa10.73□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 TRAPPC3LQ5T215 181 aa10.73□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 CAMKK2Q96RR4 588 aa10.73□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 MAP3K15Q6ZN16 1313 aa10.73□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 ERVV-1B6SEH8 477 aa10.72□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 ATP5J2-PTCD1G3V325 749 aa10.72□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 ZBTB7BO15156 539 aaPredicted RBP10.72□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 ZPR1O75312 459 aa10.72□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 ALDH1L1O75891 902 aa10.72□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 HLFQ16534 295 aa10.72□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 CWF19L2Q2TBE0 894 aaKnown RBP10.72□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 DEFB132Q7Z7B7 95 aa10.72□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 LINS1Q8NG48 757 aa10.72□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 PPP4R2Q9NY27 417 aa10.72□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 C9orf78Q9NZ63 289 aaPredicted RBP10.72□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 TFCP2L1Q9NZI6 479 aa10.72□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 TJP1Q07157 1748 aa10.72□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 LAMB4A4D0S4 1761 aa10.71□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 MSH5O43196 834 aa10.71□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 IGKV5-2P06315 115 aa10.71□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 RFC4P35249 363 aa10.71□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 COL15A1P39059 1388 aa10.71□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 TCIRG1Q13488 830 aa10.71□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 AAMPQ13685 434 aa10.71□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 HSP90AB3PQ58FF7 597 aa10.71□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 GIGYF2Q6Y7W6 1299 aaKnown RBP10.71□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 SBF2Q86WG5 1849 aa10.71□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 ARHGEF1Q92888 912 aaKnown RBP10.71□□□□□ -0.69
NEDD8-MDP1-201ENST00000530579 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.7□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 NEURL1BA8MQ27 555 aa10.7□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 CAMTA2O94983 1202 aa10.7□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 GNAI3P08754 354 aa10.7□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 GPTP24298 496 aa10.7□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 MEIS3Q99687 375 aa10.7□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 ZBTB40Q9NUA8 1239 aa10.7□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 STK32BQ9NY57 414 aa10.7□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 SRP68Q9UHB9 627 aaKnown RBP10.7□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 ZNF652Q9Y2D9 606 aa10.7□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 ATP10DQ9P241 1426 aa10.69□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 UBTFL1P0CB47 393 aaPredicted RBP10.69□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 ADRA2BP18089 450 aa10.69□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 GCKRQ14397 625 aa10.69□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 ZNF827Q17R98 1081 aa10.69□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 USPL1Q5W0Q7 1092 aa10.69□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 AMIGO3Q86WK7 504 aa10.69□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 JARID2Q92833 1246 aaPredicted RBP10.69□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 AKT1S1Q96B36 256 aa10.69□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 CCDC136Q96JN2 1154 aa10.69□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 USP44Q9H0E7 712 aa10.69□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 C1orf115Q9H7X2 142 aa10.69□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 CWC25Q9NXE8 425 aaPredicted RBP10.69□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 NARFQ9UHQ1 456 aa10.69□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 GRM8O00222 908 aa10.68□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 GNAI2P04899 355 aa10.68□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 SSFA2P28290 1259 aa10.68□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 TRIM28Q13263 835 aaKnown RBP10.68□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 CLEC4GQ6UXB4 293 aa10.68□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 BICDL1Q6ZP65 573 aa10.68□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 CCDC191Q8NCU4 936 aa10.68□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 FLAD1Q8NFF5 587 aa10.68□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 UPF1Q92900 1129 aaKnown RBP eCLIP10.68□□□□□ -0.73e-7■□□□□ 10.1
NEDD8-MDP1-201ENST00000530579 ISCA1Q9BUE6 129 aa10.68□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 HDAC5Q9UQL6 1122 aa10.68□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 ZNF831Q5JPB2 1677 aa10.68□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 PXDNLA1KZ92 1463 aa10.68□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 LY75O60449 1722 aa10.67□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 FAM177BA6PVY3 158 aa10.67□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 NBPF7P0C2Y1 421 aaPredicted RBP10.67□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 SLC15A2Q16348 729 aa10.67□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 B4GALNT3Q6L9W6 998 aa10.67□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 NLRP10Q86W26 655 aa10.67□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 ZNF34Q8IZ26 560 aa10.67□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 NIP7Q9Y221 180 aaKnown RBP eCLIP10.67□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 PCDHB15Q9Y5E8 787 aa10.67□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 CICQ96RK0 1608 aaPredicted RBP10.66□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 PARP10Q53GL7 1025 aa10.66□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 RTL5Q5HYW3 569 aaPredicted RBP10.66□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 UBE3BQ7Z3V4 1068 aa10.66□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 COL23A1Q86Y22 540 aaPredicted RBP10.66□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 SETDB2Q96T68 719 aa10.66□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 RWDD1Q9H446 243 aaPredicted RBP10.66□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 TRMT112Q9UI30 125 aaKnown RBP10.66□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 LRRFIP2Q9Y608 721 aaKnown RBP10.66□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 C4BP0C0L5 1744 aa10.66□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 USP42Q9H9J4 1324 aaKnown RBP10.65□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 H7C1W4 665 aa10.65□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 RGL2O15211 777 aa10.65□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 SUSD4Q5VX71 490 aa10.65□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 TBC1D9BQ66K14 1250 aa10.65□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 PPP1R42Q7Z4L9 355 aa10.65□□□□□ -0.7
NEDD8-MDP1-201ENST00000530579 UTP14AQ9BVJ6 771 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms