RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 EIF4G2P78344 907 aaKnown RBP eCLIP14.51□□□□□ -0.09
TM9SF1-210ENST00000530563 CNBD1Q8NA66 436 aa14.51□□□□□ -0.09
TM9SF1-210ENST00000530563 SETDB2Q96T68 719 aa14.51□□□□□ -0.09
TM9SF1-210ENST00000530563 TEX13AQ9BXU3 409 aaPredicted RBP14.51□□□□□ -0.09
TM9SF1-210ENST00000530563 KNSTRNQ9Y448 316 aa14.51□□□□□ -0.09
TM9SF1-210ENST00000530563 ARFGEF2Q9Y6D5 1785 aa14.5□□□□□ -0.09
TM9SF1-210ENST00000530563 ZNF541Q9H0D2 1346 aa14.5□□□□□ -0.09
TM9SF1-210ENST00000530563 RASSF10A6NK89 507 aa14.5□□□□□ -0.09
TM9SF1-210ENST00000530563 SOGA3Q5TF21 947 aa14.5□□□□□ -0.09
TM9SF1-210ENST00000530563 TTC5Q8N0Z6 440 aa14.5□□□□□ -0.09
TM9SF1-210ENST00000530563 TNRC18O15417 2968 aaPredicted RBP14.5□□□□□ -0.09
TM9SF1-210ENST00000530563 HSPA8P11142 646 aaKnown RBP14.49□□□□□ -0.09
TM9SF1-210ENST00000530563 OLFM4Q6UX06 510 aa14.49□□□□□ -0.09
TM9SF1-210ENST00000530563 SIPA1L3O60292 1781 aaPredicted RBP14.49□□□□□ -0.09
TM9SF1-210ENST00000530563 KCNQ3O43525 872 aa14.48□□□□□ -0.09
TM9SF1-210ENST00000530563 FKBP4Q02790 459 aaKnown RBP eCLIP14.48□□□□□ -0.09
TM9SF1-210ENST00000530563 AIDAQ96BJ3 306 aa14.48□□□□□ -0.09
TM9SF1-210ENST00000530563 ZNF277Q9NRM2 450 aaPredicted RBP14.48□□□□□ -0.09
TM9SF1-210ENST00000530563 DIAPH1O60610 1272 aaKnown RBP14.47□□□□□ -0.09
TM9SF1-210ENST00000530563 ST5P78524 1137 aa14.47□□□□□ -0.09
TM9SF1-210ENST00000530563 CCDC93Q567U6 631 aa14.47□□□□□ -0.09
TM9SF1-210ENST00000530563 ABHD8Q96I13 439 aa14.47□□□□□ -0.09
TM9SF1-210ENST00000530563 HACL1Q9UJ83 578 aa14.47□□□□□ -0.09
TM9SF1-210ENST00000530563 ZNF330Q9Y3S2 320 aaPredicted RBP14.47□□□□□ -0.09
TM9SF1-210ENST00000530563 CEMIPQ8WUJ3 1361 aa14.47□□□□□ -0.09
TM9SF1-210ENST00000530563 CACNA1SQ13698 1873 aa14.46□□□□□ -0.09
TM9SF1-210ENST00000530563 GNAT3A8MTJ3 354 aa14.46□□□□□ -0.09
TM9SF1-210ENST00000530563 FZD9O00144 591 aa14.46□□□□□ -0.09
TM9SF1-210ENST00000530563 PER1O15534 1290 aaPredicted RBP14.46□□□□□ -0.09
TM9SF1-210ENST00000530563 NPR1P16066 1061 aa14.46□□□□□ -0.09
TM9SF1-210ENST00000530563 EPHX2P34913 555 aa14.46□□□□□ -0.09
TM9SF1-210ENST00000530563 TEFQ10587 303 aa14.46□□□□□ -0.09
TM9SF1-210ENST00000530563 DEFB115Q30KQ5 88 aa14.46□□□□□ -0.09
TM9SF1-210ENST00000530563 EAPPQ56P03 285 aaPredicted RBP14.46□□□□□ -0.09
TM9SF1-210ENST00000530563 MAP1SQ66K74 1059 aaPredicted RBP14.46□□□□□ -0.09
TM9SF1-210ENST00000530563 CLEC4GQ6UXB4 293 aa14.46□□□□□ -0.09
TM9SF1-210ENST00000530563 DZIP3Q86Y13 1208 aaKnown RBP14.46□□□□□ -0.09
TM9SF1-210ENST00000530563 CNTROBQ8N137 903 aa14.46□□□□□ -0.09
TM9SF1-210ENST00000530563 FMNL2Q96PY5 1086 aa14.46□□□□□ -0.09
TM9SF1-210ENST00000530563 USP16Q9Y5T5 823 aa14.46□□□□□ -0.09
TM9SF1-210ENST00000530563 BCORQ6W2J9 1755 aa14.46□□□□□ -0.09
TM9SF1-210ENST00000530563 SNED1Q8TER0 1413 aa14.46□□□□□ -0.09
TM9SF1-210ENST00000530563 WDR33Q9C0J8 1336 aaKnown RBP14.45□□□□□ -0.1
TM9SF1-210ENST00000530563 COL3A1P02461 1466 aaPredicted RBP14.45□□□□□ -0.1
TM9SF1-210ENST00000530563 PIP4K2AP48426 406 aaPredicted RBP14.45□□□□□ -0.1
TM9SF1-210ENST00000530563 PRAMEF22A3QJZ6 481 aa14.44□□□□□ -0.1
TM9SF1-210ENST00000530563 PNMA8AQ86V59 439 aaPredicted RBP14.44□□□□□ -0.1
TM9SF1-210ENST00000530563 NBPF5PQ86XG9 351 aaPredicted RBP14.44□□□□□ -0.1
TM9SF1-210ENST00000530563 RNF123Q5XPI4 1314 aa14.43□□□□□ -0.1
TM9SF1-210ENST00000530563 RGS19P49795 217 aa14.43□□□□□ -0.1
TM9SF1-210ENST00000530563 FMR1Q06787 632 aaKnown RBP eCLIP14.43□□□□□ -0.1
TM9SF1-210ENST00000530563 FAM161AQ3B820 660 aa14.43□□□□□ -0.1
TM9SF1-210ENST00000530563 RTKN2Q8IZC4 609 aa14.43□□□□□ -0.1
TM9SF1-210ENST00000530563 SYNE4Q8N205 404 aa14.43□□□□□ -0.1
TM9SF1-210ENST00000530563 CLEC11AQ9Y240 323 aa14.43□□□□□ -0.1
TM9SF1-210ENST00000530563 COL4A5P29400 1685 aa14.42□□□□□ -0.1
TM9SF1-210ENST00000530563 CLSPNQ9HAW4 1339 aa14.42□□□□□ -0.1
TM9SF1-210ENST00000530563 NBPF26B4DH59 902 aa14.42□□□□□ -0.1
TM9SF1-210ENST00000530563 NPHP1O15259 732 aa14.42□□□□□ -0.1
TM9SF1-210ENST00000530563 IARSP41252 1262 aaKnown RBP14.42□□□□□ -0.1
TM9SF1-210ENST00000530563 MAP2K1Q02750 393 aaPredicted RBP14.42□□□□□ -0.1
TM9SF1-210ENST00000530563 NBPF10Q6P3W6 841 aaKnown RBP14.42□□□□□ -0.1
TM9SF1-210ENST00000530563 GPC2Q8N158 579 aa14.42□□□□□ -0.1
TM9SF1-210ENST00000530563 NBPF15Q8N660 670 aa14.42□□□□□ -0.1
TM9SF1-210ENST00000530563 GAS2L2Q8NHY3 880 aa14.42□□□□□ -0.1
TM9SF1-210ENST00000530563 PHACTR3Q96KR7 559 aa14.42□□□□□ -0.1
TM9SF1-210ENST00000530563 DDX21Q9NR30 783 aaKnown RBP eCLIP14.42□□□□□ -0.1
TM9SF1-210ENST00000530563 RGL2O15211 777 aa14.41□□□□□ -0.1
TM9SF1-210ENST00000530563 TRIM26Q12899 539 aaPredicted RBP14.41□□□□□ -0.1
TM9SF1-210ENST00000530563 LTBP1Q14766 1721 aa14.41□□□□□ -0.1
TM9SF1-210ENST00000530563 THSD7BQ9C0I4 1608 aa14.41□□□□□ -0.1
TM9SF1-210ENST00000530563 BTBD11A6QL63 1104 aa14.4□□□□□ -0.1
TM9SF1-210ENST00000530563 CST9Q5W186 159 aa14.4□□□□□ -0.1
TM9SF1-210ENST00000530563 TPTE2Q6XPS3 522 aa14.4□□□□□ -0.1
TM9SF1-210ENST00000530563 PSMD1Q99460 953 aa14.4□□□□□ -0.1
TM9SF1-210ENST00000530563 HLFQ16534 295 aa14.39□□□□□ -0.11
TM9SF1-210ENST00000530563 CRY2Q49AN0 593 aa14.39□□□□□ -0.11
TM9SF1-210ENST00000530563 NPM2Q86SE8 214 aaKnown RBP14.39□□□□□ -0.11
TM9SF1-210ENST00000530563 NIP7Q9Y221 180 aaKnown RBP eCLIP14.39□□□□□ -0.11
TM9SF1-210ENST00000530563 KIF7Q2M1P5 1343 aa14.39□□□□□ -0.11
TM9SF1-210ENST00000530563 ALDH1B1P30837 517 aa14.38□□□□□ -0.11
TM9SF1-210ENST00000530563 EPS15P42566 896 aa14.38□□□□□ -0.11
TM9SF1-210ENST00000530563 SCNN1DP51172 638 aa14.38□□□□□ -0.11
TM9SF1-210ENST00000530563 CC2D1BQ5T0F9 858 aaKnown RBP14.38□□□□□ -0.11
TM9SF1-210ENST00000530563 SLC51AQ86UW1 340 aa14.38□□□□□ -0.11
TM9SF1-210ENST00000530563 CAPNS2Q96L46 248 aa14.38□□□□□ -0.11
TM9SF1-210ENST00000530563 ABT1Q9ULW3 272 aaKnown RBP14.38□□□□□ -0.11
TM9SF1-210ENST00000530563 ZNF652Q9Y2D9 606 aa14.38□□□□□ -0.11
TM9SF1-210ENST00000530563 U2SURPO15042 1029 aaKnown RBP14.37□□□□□ -0.11
TM9SF1-210ENST00000530563 SNRPA1P09661 255 aaKnown RBP14.37□□□□□ -0.11
TM9SF1-210ENST00000530563 CYP4F22Q6NT55 531 aa14.37□□□□□ -0.11
TM9SF1-210ENST00000530563 FAM177BA6PVY3 158 aa14.36□□□□□ -0.11
TM9SF1-210ENST00000530563 TRAF5O00463 557 aa14.36□□□□□ -0.11
TM9SF1-210ENST00000530563 HOXA10P31260 410 aaPredicted RBP14.36□□□□□ -0.11
TM9SF1-210ENST00000530563 MLLT1Q03111 559 aaPredicted RBP14.36□□□□□ -0.11
TM9SF1-210ENST00000530563 GPR101Q96P66 508 aaPredicted RBP14.36□□□□□ -0.11
TM9SF1-210ENST00000530563 RSPH6AQ9H0K4 717 aa14.36□□□□□ -0.11
TM9SF1-210ENST00000530563 ABCC12Q96J65 1359 aa14.35□□□□□ -0.11
TM9SF1-210ENST00000530563 CCDC85CA6NKD9 419 aa14.35□□□□□ -0.11
TM9SF1-210ENST00000530563 JDP2Q8WYK2 163 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms