RNA–Protein interactions for RNA: ENST00000530267.5

USP35-204, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2 BASIC

Gene USP35, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-204ENST00000530267 NEURL1BA8MQ27 555 aa18.48■□□□□ 0.55
USP35-204ENST00000530267 TRAK2O60296 914 aa18.48■□□□□ 0.55
USP35-204ENST00000530267 ANKRD13DQ6ZTN6 518 aa18.48■□□□□ 0.55
USP35-204ENST00000530267 AOX1Q06278 1338 aa18.48■□□□□ 0.55
USP35-204ENST00000530267 BRPF3Q9ULD4 1205 aa18.48■□□□□ 0.55
USP35-204ENST00000530267 WDR17Q8IZU2 1322 aa18.47■□□□□ 0.55
USP35-204ENST00000530267 ATP5J2-PTCD1G3V325 749 aa18.47■□□□□ 0.55
USP35-204ENST00000530267 PTCD1O75127 700 aaKnown RBP18.47■□□□□ 0.55
USP35-204ENST00000530267 ZCRB1Q8TBF4 217 aaKnown RBP18.47■□□□□ 0.55
USP35-204ENST00000530267 ZGPATQ8N5A5 531 aaKnown RBP18.47■□□□□ 0.55
USP35-204ENST00000530267 LMTK3Q96Q04 1460 aa18.46■□□□□ 0.55
USP35-204ENST00000530267 GCKRQ14397 625 aa18.46■□□□□ 0.55
USP35-204ENST00000530267 AACSQ86V21 672 aa18.46■□□□□ 0.55
USP35-204ENST00000530267 IFIT2P09913 472 aaKnown RBP18.45■□□□□ 0.54
USP35-204ENST00000530267 MCCP23508 829 aa18.45■□□□□ 0.54
USP35-204ENST00000530267 EPHA10Q5JZY3 1008 aa18.45■□□□□ 0.54
USP35-204ENST00000530267 CWC27Q6UX04 472 aaKnown RBP18.45■□□□□ 0.54
USP35-204ENST00000530267 CNTROBQ8N137 903 aa18.45■□□□□ 0.54
USP35-204ENST00000530267 METTL22Q9BUU2 404 aaPredicted RBP18.45■□□□□ 0.54
USP35-204ENST00000530267 SOS2Q07890 1332 aaPredicted RBP18.45■□□□□ 0.54
USP35-204ENST00000530267 PKP1Q13835 747 aa18.45■□□□□ 0.54
USP35-204ENST00000530267 HDAC5Q9UQL6 1122 aa18.45■□□□□ 0.54
USP35-204ENST00000530267 STRCQ7RTU9 1775 aa18.45■□□□□ 0.54
USP35-204ENST00000530267 EVA1CP58658 441 aa18.44■□□□□ 0.54
USP35-204ENST00000530267 G3BP1Q13283 466 aaKnown RBP eCLIP18.44■□□□□ 0.54
USP35-204ENST00000530267 LRP10Q7Z4F1 713 aa18.44■□□□□ 0.54
USP35-204ENST00000530267 IL27Q8NEV9 243 aa18.44■□□□□ 0.54
USP35-204ENST00000530267 UPF3BQ9BZI7 483 aaKnown RBP18.44■□□□□ 0.54
USP35-204ENST00000530267 CCDC8Q9H0W5 538 aaPredicted RBP18.44■□□□□ 0.54
USP35-204ENST00000530267 DDX11L8A8MPP1 907 aa18.44■□□□□ 0.54
USP35-204ENST00000530267 GBP4Q96PP9 640 aa18.44■□□□□ 0.54
USP35-204ENST00000530267 UTYO14607 1347 aa18.44■□□□□ 0.54
USP35-204ENST00000530267 SASH1O94885 1247 aa18.43■□□□□ 0.54
USP35-204ENST00000530267 PCDH11XQ9BZA7 1347 aa18.43■□□□□ 0.54
USP35-204ENST00000530267 PCDH11YQ9BZA8 1340 aa18.43■□□□□ 0.54
USP35-204ENST00000530267 UBE3BQ7Z3V4 1068 aa18.43■□□□□ 0.54
USP35-204ENST00000530267 GLRX3O76003 335 aaKnown RBP18.42■□□□□ 0.54
USP35-204ENST00000530267 ECHDC1Q9NTX5 307 aa18.42■□□□□ 0.54
USP35-204ENST00000530267 TLR7Q9NYK1 1049 aaKnown RBP18.42■□□□□ 0.54
USP35-204ENST00000530267 ERC1Q8IUD2 1116 aa18.42■□□□□ 0.54
USP35-204ENST00000530267 EAF2Q96CJ1 260 aaPredicted RBP18.42■□□□□ 0.54
USP35-204ENST00000530267 PKD1L3Q7Z443 1732 aa18.42■□□□□ 0.54
USP35-204ENST00000530267 IL2RBP14784 551 aa18.41■□□□□ 0.54
USP35-204ENST00000530267 COL5A2P05997 1499 aaPredicted RBP18.41■□□□□ 0.54
USP35-204ENST00000530267 MRC1P22897 1456 aa18.41■□□□□ 0.54
USP35-204ENST00000530267 TTC41PQ6P2S7 1318 aa18.41■□□□□ 0.54
USP35-204ENST00000530267 SGSM2O43147 1006 aa18.4■□□□□ 0.54
USP35-204ENST00000530267 A1BGP04217 495 aa18.4■□□□□ 0.54
USP35-204ENST00000530267 GPATCH3Q96I76 525 aa18.4■□□□□ 0.54
USP35-204ENST00000530267 A0A087WZG4 1122 aa18.4■□□□□ 0.54
USP35-204ENST00000530267 NBPF26B4DH59 902 aa18.4■□□□□ 0.54
USP35-204ENST00000530267 NBPF14Q5TI25 921 aa18.4■□□□□ 0.54
USP35-204ENST00000530267 NBPF10Q6P3W6 841 aaKnown RBP18.4■□□□□ 0.54
USP35-204ENST00000530267 NBPF15Q8N660 670 aa18.4■□□□□ 0.54
USP35-204ENST00000530267 TMX3Q96JJ7 454 aa18.4■□□□□ 0.54
USP35-204ENST00000530267 DIAPH3Q9NSV4 1193 aa18.4■□□□□ 0.54
USP35-204ENST00000530267 ABCC6O95255 1503 aa18.39■□□□□ 0.53
USP35-204ENST00000530267 FOXD4L5Q5VV16 416 aaPredicted RBP18.39■□□□□ 0.53
USP35-204ENST00000530267 FOXD4L4Q8WXT5 416 aaPredicted RBP18.39■□□□□ 0.53
USP35-204ENST00000530267 TTLL7Q6ZT98 887 aa18.39■□□□□ 0.53
USP35-204ENST00000530267 RTN4Q9NQC3 1192 aaKnown RBP18.38■□□□□ 0.53
USP35-204ENST00000530267 ZNF330Q9Y3S2 320 aaPredicted RBP18.38■□□□□ 0.53
USP35-204ENST00000530267 USP42Q9H9J4 1324 aaKnown RBP18.38■□□□□ 0.53
USP35-204ENST00000530267 KIAA1211Q6ZU35 1233 aa18.38■□□□□ 0.53
USP35-204ENST00000530267 CARD10Q9BWT7 1032 aa18.38■□□□□ 0.53
USP35-204ENST00000530267 HSPA4P34932 840 aa18.37■□□□□ 0.53
USP35-204ENST00000530267 ANAPC15P60006 121 aa18.37■□□□□ 0.53
USP35-204ENST00000530267 BOLA2Q9H3K6 86 aa18.37■□□□□ 0.53
USP35-204ENST00000530267 CHMP3Q9Y3E7 222 aa18.37■□□□□ 0.53
USP35-204ENST00000530267 BAG4O95429 457 aaKnown RBP18.37■□□□□ 0.53
USP35-204ENST00000530267 PLBD2Q8NHP8 589 aa18.37■□□□□ 0.53
USP35-204ENST00000530267 LARP6Q9BRS8 491 aaKnown RBP18.37■□□□□ 0.53
USP35-204ENST00000530267 LSG1Q9H089 658 aaKnown RBP18.37■□□□□ 0.53
USP35-204ENST00000530267 ZBTB3Q9H5J0 574 aa18.37■□□□□ 0.53
USP35-204ENST00000530267 ERVV-2B6SEH9 535 aa18.36■□□□□ 0.53
USP35-204ENST00000530267 RAD50Q92878 1312 aa18.36■□□□□ 0.53
USP35-204ENST00000530267 MCTP1Q6DN14 999 aa18.35■□□□□ 0.53
USP35-204ENST00000530267 RASEFQ8IZ41 740 aa18.35■□□□□ 0.53
USP35-204ENST00000530267 CHAMP1Q96JM3 812 aa18.35■□□□□ 0.53
USP35-204ENST00000530267 CWC22Q9HCG8 908 aaKnown RBP18.35■□□□□ 0.53
USP35-204ENST00000530267 CCDC9Q9Y3X0 531 aaKnown RBP18.35■□□□□ 0.53
USP35-204ENST00000530267 NUCB2P80303 420 aa18.35■□□□□ 0.53
USP35-204ENST00000530267 PARP4Q9UKK3 1724 aaKnown RBP18.35■□□□□ 0.53
USP35-204ENST00000530267 PTH1RQ03431 593 aa18.34■□□□□ 0.53
USP35-204ENST00000530267 BTG4Q9NY30 223 aa18.34■□□□□ 0.53
USP35-204ENST00000530267 SNX14Q9Y5W7 946 aa18.34■□□□□ 0.53
USP35-204ENST00000530267 AFDNP55196 1824 aaKnown RBP18.34■□□□□ 0.53
USP35-204ENST00000530267 KAT6BQ8WYB5 2073 aa18.34■□□□□ 0.53
USP35-204ENST00000530267 GOLGA6L3A6NEY3 463 aa18.34■□□□□ 0.53
USP35-204ENST00000530267 PTPN12Q05209 780 aaKnown RBP18.34■□□□□ 0.53
USP35-204ENST00000530267 EVI5LQ96CN4 794 aa18.34■□□□□ 0.53
USP35-204ENST00000530267 FAM227BQ96M60 508 aa18.34■□□□□ 0.53
USP35-204ENST00000530267 NDUFB9Q9Y6M9 179 aa18.34■□□□□ 0.53
USP35-204ENST00000530267 CPA1P15085 419 aa18.33■□□□□ 0.53
USP35-204ENST00000530267 TFCP2Q12800 502 aa18.33■□□□□ 0.53
USP35-204ENST00000530267 EDC3Q96F86 508 aaKnown RBP18.33■□□□□ 0.53
USP35-204ENST00000530267 GOLGA6L22H0YM25 854 aa18.33■□□□□ 0.52
USP35-204ENST00000530267 LMBR1LQ6UX01 489 aa18.33■□□□□ 0.52
USP35-204ENST00000530267 ZDHHC9Q9Y397 364 aa18.33■□□□□ 0.52
USP35-204ENST00000530267 PLEKHG2Q9H7P9 1386 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms