RNA–Protein interactions for RNA: ENST00000529813.1

USP47-208, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 3,123 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-208ENST00000529813 PLEKHG2Q9H7P9 1386 aa5.95□□□□□ -1.46
USP47-208ENST00000529813 GRIN3BO60391 1043 aa5.94□□□□□ -1.46
USP47-208ENST00000529813 EXOSC9Q06265 439 aaKnown RBP5.94□□□□□ -1.46
USP47-208ENST00000529813 TWISTNBQ3B726 338 aaPredicted RBP5.94□□□□□ -1.46
USP47-208ENST00000529813 DALRD3Q5D0E6 543 aaKnown RBP5.94□□□□□ -1.46
USP47-208ENST00000529813 YTHDC1Q96MU7 727 aaKnown RBP5.94□□□□□ -1.46
USP47-208ENST00000529813 IFT57Q9NWB7 429 aa5.94□□□□□ -1.46
USP47-208ENST00000529813 C4BP0C0L5 1744 aa5.94□□□□□ -1.46
USP47-208ENST00000529813 BCL2L13Q9BXK5 485 aa5.94□□□□□ -1.46
USP47-208ENST00000529813 PHAXQ9H814 394 aaKnown RBP5.94□□□□□ -1.46
USP47-208ENST00000529813 TRMT112Q9UI30 125 aaKnown RBP5.94□□□□□ -1.46
USP47-208ENST00000529813 SLC4A2P04920 1241 aa5.94□□□□□ -1.46
USP47-208ENST00000529813 HCLS1P14317 486 aaPredicted RBP5.94□□□□□ -1.46
USP47-208ENST00000529813 PRR5LQ6MZQ0 368 aa5.94□□□□□ -1.46
USP47-208ENST00000529813 DBF4Q9UBU7 674 aaPredicted RBP5.94□□□□□ -1.46
USP47-208ENST00000529813 RREB1Q92766 1687 aa5.93□□□□□ -1.46
USP47-208ENST00000529813 C21orf2O43822 256 aa5.93□□□□□ -1.46
USP47-208ENST00000529813 TM4SF1P30408 202 aa5.93□□□□□ -1.46
USP47-208ENST00000529813 FKBP5Q13451 457 aaPredicted RBP5.93□□□□□ -1.46
USP47-208ENST00000529813 CCDC30Q5VVM6 783 aa5.93□□□□□ -1.46
USP47-208ENST00000529813 SLC4A10Q6U841 1118 aa5.93□□□□□ -1.46
USP47-208ENST00000529813 ANKRD13DQ6ZTN6 518 aa5.93□□□□□ -1.46
USP47-208ENST00000529813 MYD88Q99836 296 aa5.93□□□□□ -1.46
USP47-208ENST00000529813 DDX21Q9NR30 783 aaKnown RBP eCLIP5.93□□□□□ -1.46
USP47-208ENST00000529813 MAP3K15Q6ZN16 1313 aa5.93□□□□□ -1.46
USP47-208ENST00000529813 RPGRQ92834 1020 aaKnown RBP5.93□□□□□ -1.46
USP47-208ENST00000529813 TMX4Q9H1E5 349 aaPredicted RBP5.93□□□□□ -1.46
USP47-208ENST00000529813 MYH16Q9H6N6 1097 aa5.93□□□□□ -1.46
USP47-208ENST00000529813 PDE6BP35913 854 aa5.92□□□□□ -1.46
USP47-208ENST00000529813 TGFB2P61812 414 aa5.92□□□□□ -1.46
USP47-208ENST00000529813 ERFEQ4G0M1 354 aa5.92□□□□□ -1.46
USP47-208ENST00000529813 SYNE4Q8N205 404 aa5.92□□□□□ -1.46
USP47-208ENST00000529813 TTLL6Q8N841 843 aa5.92□□□□□ -1.46
USP47-208ENST00000529813 CDCA7LQ96GN5 454 aa5.92□□□□□ -1.46
USP47-208ENST00000529813 SPINK5Q9NQ38 1064 aaPredicted RBP5.92□□□□□ -1.46
USP47-208ENST00000529813 DDX58O95786 925 aaKnown RBP5.92□□□□□ -1.46
USP47-208ENST00000529813 SUSD4Q5VX71 490 aa5.92□□□□□ -1.46
USP47-208ENST00000529813 PPP1R42Q7Z4L9 355 aa5.92□□□□□ -1.46
USP47-208ENST00000529813 FAM89AQ96GI7 184 aa5.92□□□□□ -1.46
USP47-208ENST00000529813 UTP14AQ9BVJ6 771 aaKnown RBP5.92□□□□□ -1.46
USP47-208ENST00000529813 HYPKQ9NX55 129 aa5.92□□□□□ -1.46
USP47-208ENST00000529813 KCPQ6ZWJ8 1503 aa5.92□□□□□ -1.46
USP47-208ENST00000529813 CARMIL3Q8ND23 1372 aa5.92□□□□□ -1.46
USP47-208ENST00000529813 FANCIQ9NVI1 1328 aa5.92□□□□□ -1.46
USP47-208ENST00000529813 CLEC4GQ6UXB4 293 aa5.92□□□□□ -1.46
USP47-208ENST00000529813 GIGYF2Q6Y7W6 1299 aaKnown RBP5.92□□□□□ -1.46
USP47-208ENST00000529813 RNF181Q9P0P0 153 aa5.92□□□□□ -1.46
USP47-208ENST00000529813 CHMP3Q9Y3E7 222 aa5.92□□□□□ -1.46
USP47-208ENST00000529813 C5P01031 1676 aa5.91□□□□□ -1.46
USP47-208ENST00000529813 PI4KAP2A4QPH2 592 aa5.91□□□□□ -1.46
USP47-208ENST00000529813 RASSF7Q02833 373 aa5.91□□□□□ -1.46
USP47-208ENST00000529813 NEXNQ0ZGT2 675 aa5.91□□□□□ -1.46
USP47-208ENST00000529813 PDIA6Q15084 440 aa5.91□□□□□ -1.46
USP47-208ENST00000529813 OLFM4Q6UX06 510 aa5.91□□□□□ -1.46
USP47-208ENST00000529813 G2E3Q7L622 706 aa5.91□□□□□ -1.46
USP47-208ENST00000529813 PI4KAP1Q8N8J0 262 aa5.91□□□□□ -1.46
USP47-208ENST00000529813 NLRP3Q96P20 1036 aa5.91□□□□□ -1.46
USP47-208ENST00000529813 BRIP1Q9BX63 1249 aa5.91□□□□□ -1.46
USP47-208ENST00000529813 NYXQ9GZU5 481 aa5.91□□□□□ -1.46
USP47-208ENST00000529813 BABAM1Q9NWV8 329 aa5.91□□□□□ -1.46
USP47-208ENST00000529813 MRC1P22897 1456 aa5.91□□□□□ -1.46
USP47-208ENST00000529813 MYH14Q7Z406 1995 aaKnown RBP5.91□□□□□ -1.46
USP47-208ENST00000529813 F6X3S4 739 aa5.91□□□□□ -1.46
USP47-208ENST00000529813 HSP90AB3PQ58FF7 597 aa5.91□□□□□ -1.46
USP47-208ENST00000529813 BCL11AQ9H165 835 aa5.91□□□□□ -1.46
USP47-208ENST00000529813 MAP3K2Q9Y2U5 619 aa5.91□□□□□ -1.46
USP47-208ENST00000529813 C9orf131Q5VYM1 1079 aa5.9□□□□□ -1.46
USP47-208ENST00000529813 GPBP1L1Q9HC44 474 aaPredicted RBP5.9□□□□□ -1.46
USP47-208ENST00000529813 SCN11AQ9UI33 1791 aa5.9□□□□□ -1.46
USP47-208ENST00000529813 LY75O60449 1722 aa5.9□□□□□ -1.46
USP47-208ENST00000529813 PAPPAQ13219 1627 aa5.9□□□□□ -1.46
USP47-208ENST00000529813 CICQ96RK0 1608 aaPredicted RBP5.9□□□□□ -1.46
USP47-208ENST00000529813 ERVV-1B6SEH8 477 aa5.9□□□□□ -1.46
USP47-208ENST00000529813 CCER2I3L3R5 266 aa5.9□□□□□ -1.46
USP47-208ENST00000529813 ZNF853P0CG23 659 aa5.9□□□□□ -1.46
USP47-208ENST00000529813 TCIRG1Q13488 830 aa5.9□□□□□ -1.46
USP47-208ENST00000529813 WDR63Q8IWG1 891 aa5.9□□□□□ -1.46
USP47-208ENST00000529813 CNKSR1Q969H4 720 aa5.9□□□□□ -1.46
USP47-208ENST00000529813 CHMP4AQ9BY43 222 aa5.9□□□□□ -1.46
USP47-208ENST00000529813 UBN2Q6ZU65 1347 aa5.9□□□□□ -1.47
USP47-208ENST00000529813 CWF19L2Q2TBE0 894 aaKnown RBP5.9□□□□□ -1.47
USP47-208ENST00000529813 PRPF40BQ6NWY9 871 aaKnown RBP5.9□□□□□ -1.47
USP47-208ENST00000529813 PLBD2Q8NHP8 589 aa5.9□□□□□ -1.47
USP47-208ENST00000529813 MASTLQ96GX5 879 aa5.9□□□□□ -1.47
USP47-208ENST00000529813 ERBB4Q15303 1308 aa5.89□□□□□ -1.47
USP47-208ENST00000529813 SH3TC1Q8TE82 1336 aa5.89□□□□□ -1.47
USP47-208ENST00000529813 PARP10Q53GL7 1025 aa5.89□□□□□ -1.47
USP47-208ENST00000529813 DDX46Q7L014 1031 aaKnown RBP5.89□□□□□ -1.47
USP47-208ENST00000529813 NLRP10Q86W26 655 aa5.89□□□□□ -1.47
USP47-208ENST00000529813 ZNF784Q8NCA9 323 aaPredicted RBP5.89□□□□□ -1.47
USP47-208ENST00000529813 FRAT1Q92837 279 aaPredicted RBP5.89□□□□□ -1.47
USP47-208ENST00000529813 SMC4Q9NTJ3 1288 aa5.89□□□□□ -1.47
USP47-208ENST00000529813 G3V3G9 751 aa5.89□□□□□ -1.47
USP47-208ENST00000529813 IRS4O14654 1257 aaPredicted RBP5.89□□□□□ -1.47
USP47-208ENST00000529813 FLIIQ13045 1269 aa5.89□□□□□ -1.47
USP47-208ENST00000529813 CCDC27Q2M243 656 aa5.89□□□□□ -1.47
USP47-208ENST00000529813 DCAF8Q5TAQ9 597 aa5.89□□□□□ -1.47
USP47-208ENST00000529813 RGPD3A6NKT7 1758 aaPredicted RBP5.88□□□□□ -1.47
USP47-208ENST00000529813 RGPD4Q7Z3J3 1758 aa5.88□□□□□ -1.47
USP47-208ENST00000529813 HOXB7P09629 217 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms