RNA–Protein interactions for RNA: ENST00000529773.1

CLP1-204, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-204ENST00000529773 CLEC4GQ6UXB4 293 aa22.37■■□□□ 1.17
CLP1-204ENST00000529773 KIF6Q6ZMV9 814 aa22.37■■□□□ 1.17
CLP1-204ENST00000529773 COPS6Q7L5N1 327 aa22.37■■□□□ 1.17
CLP1-204ENST00000529773 SSH1Q8WYL5 1049 aa22.37■■□□□ 1.17
CLP1-204ENST00000529773 SGIP1Q9BQI5 828 aa22.37■■□□□ 1.17
CLP1-204ENST00000529773 SLC4A2P04920 1241 aa22.36■■□□□ 1.17
CLP1-204ENST00000529773 PHAXQ9H814 394 aaKnown RBP22.36■■□□□ 1.17
CLP1-204ENST00000529773 NUP98P52948 1817 aa22.36■■□□□ 1.17
CLP1-204ENST00000529773 ANKRD36CQ5JPF3 1778 aa22.35■■□□□ 1.17
CLP1-204ENST00000529773 TCERG1O14776 1098 aaKnown RBP22.35■■□□□ 1.17
CLP1-204ENST00000529773 MSH5O43196 834 aa22.35■■□□□ 1.17
CLP1-204ENST00000529773 RARSP54136 660 aaKnown RBP22.35■■□□□ 1.17
CLP1-204ENST00000529773 NLGN1Q8N2Q7 840 aa22.35■■□□□ 1.17
CLP1-204ENST00000529773 MRPL50Q8N5N7 158 aaKnown RBP22.35■■□□□ 1.17
CLP1-204ENST00000529773 ZBTB7AO95365 584 aa22.34■■□□□ 1.17
CLP1-204ENST00000529773 FLIIQ13045 1269 aa22.34■■□□□ 1.17
CLP1-204ENST00000529773 FKBP8Q14318 412 aa22.34■■□□□ 1.17
CLP1-204ENST00000529773 G2E3Q7L622 706 aa22.34■■□□□ 1.17
CLP1-204ENST00000529773 PLBD2Q8NHP8 589 aa22.34■■□□□ 1.17
CLP1-204ENST00000529773 ZNF652Q9Y2D9 606 aa22.34■■□□□ 1.17
CLP1-204ENST00000529773 NRXN2Q9P2S2 1712 aa22.34■■□□□ 1.17
CLP1-204ENST00000529773 GIGYF2Q6Y7W6 1299 aaKnown RBP22.33■■□□□ 1.17
CLP1-204ENST00000529773 ADCY9O60503 1353 aa22.33■■□□□ 1.17
CLP1-204ENST00000529773 PTGER2P43116 358 aa22.32■■□□□ 1.16
CLP1-204ENST00000529773 HLFQ16534 295 aa22.32■■□□□ 1.16
CLP1-204ENST00000529773 ANKRD13DQ6ZTN6 518 aa22.32■■□□□ 1.16
CLP1-204ENST00000529773 DDX58O95786 925 aaKnown RBP22.31■■□□□ 1.16
CLP1-204ENST00000529773 TM4SF1P30408 202 aa22.31■■□□□ 1.16
CLP1-204ENST00000529773 AIMP1Q12904 312 aaKnown RBP22.31■■□□□ 1.16
CLP1-204ENST00000529773 ZBTB3Q9H5J0 574 aa22.31■■□□□ 1.16
CLP1-204ENST00000529773 PTPRCP08575 1304 aa22.31■■□□□ 1.16
CLP1-204ENST00000529773 IBTKQ9P2D0 1353 aaPredicted RBP22.3■■□□□ 1.16
CLP1-204ENST00000529773 NFIXQ14938 502 aa22.3■■□□□ 1.16
CLP1-204ENST00000529773 MSL1Q68DK7 614 aa22.3■■□□□ 1.16
CLP1-204ENST00000529773 SPON1Q9HCB6 807 aa22.3■■□□□ 1.16
CLP1-204ENST00000529773 SMC4Q9NTJ3 1288 aa22.3■■□□□ 1.16
CLP1-204ENST00000529773 HSP90AB3PQ58FF7 597 aa22.29■■□□□ 1.16
CLP1-204ENST00000529773 TBC1D9BQ66K14 1250 aa22.29■■□□□ 1.16
CLP1-204ENST00000529773 KSR2Q6VAB6 950 aa22.29■■□□□ 1.16
CLP1-204ENST00000529773 KIF16BQ96L93 1317 aa22.29■■□□□ 1.16
CLP1-204ENST00000529773 PXDNLA1KZ92 1463 aa22.28■■□□□ 1.16
CLP1-204ENST00000529773 CARMIL3Q8ND23 1372 aa22.28■■□□□ 1.16
CLP1-204ENST00000529773 N4BP2Q86UW6 1770 aaPredicted RBP22.28■■□□□ 1.16
CLP1-204ENST00000529773 DDR1Q08345 913 aa22.28■■□□□ 1.16
CLP1-204ENST00000529773 ZNF34Q8IZ26 560 aa22.28■■□□□ 1.16
CLP1-204ENST00000529773 ARXQ96QS3 562 aa22.28■■□□□ 1.16
CLP1-204ENST00000529773 BCL2L13Q9BXK5 485 aa22.28■■□□□ 1.16
CLP1-204ENST00000529773 POLRMTO00411 1230 aaKnown RBP22.27■■□□□ 1.16
CLP1-204ENST00000529773 MMP10P09238 476 aa22.27■■□□□ 1.16
CLP1-204ENST00000529773 FKBP5Q13451 457 aaPredicted RBP22.27■■□□□ 1.16
CLP1-204ENST00000529773 ATF5Q9Y2D1 282 aaPredicted RBP22.27■■□□□ 1.16
CLP1-204ENST00000529773 PI4KAP2A4QPH2 592 aa22.26■■□□□ 1.15
CLP1-204ENST00000529773 TCIRG1Q13488 830 aa22.26■■□□□ 1.15
CLP1-204ENST00000529773 PI4KAP1Q8N8J0 262 aa22.26■■□□□ 1.15
CLP1-204ENST00000529773 ISCA1Q9BUE6 129 aa22.26■■□□□ 1.15
CLP1-204ENST00000529773 AFDNP55196 1824 aaKnown RBP22.26■■□□□ 1.15
CLP1-204ENST00000529773 UBN2Q6ZU65 1347 aa22.26■■□□□ 1.15
CLP1-204ENST00000529773 POLD1P28340 1107 aa22.25■■□□□ 1.15
CLP1-204ENST00000529773 TRIM28Q13263 835 aaKnown RBP22.25■■□□□ 1.15
CLP1-204ENST00000529773 RIC3Q7Z5B4 369 aa22.25■■□□□ 1.15
CLP1-204ENST00000529773 METTL22Q9BUU2 404 aaPredicted RBP22.25■■□□□ 1.15
CLP1-204ENST00000529773 MAP3K2Q9Y2U5 619 aa22.25■■□□□ 1.15
CLP1-204ENST00000529773 KIF13BQ9NQT8 1826 aa22.24■■□□□ 1.15
CLP1-204ENST00000529773 C10orf71Q711Q0 1435 aa22.24■■□□□ 1.15
CLP1-204ENST00000529773 ARHGAP45Q92619 1136 aa22.24■■□□□ 1.15
CLP1-204ENST00000529773 BCAR3O75815 825 aa22.23■■□□□ 1.15
CLP1-204ENST00000529773 PARP10Q53GL7 1025 aa22.23■■□□□ 1.15
CLP1-204ENST00000529773 DNAAF4Q8WXU2 420 aa22.23■■□□□ 1.15
CLP1-204ENST00000529773 SETDB2Q96T68 719 aa22.23■■□□□ 1.15
CLP1-204ENST00000529773 NIP7Q9Y221 180 aaKnown RBP eCLIP22.23■■□□□ 1.15
CLP1-204ENST00000529773 RCAN3Q9UKA8 241 aa22.22■■□□□ 1.15
CLP1-204ENST00000529773 RNF123Q5XPI4 1314 aa22.22■■□□□ 1.15
CLP1-204ENST00000529773 RIC1Q4ADV7 1423 aa22.22■■□□□ 1.15
CLP1-204ENST00000529773 NLRP10Q86W26 655 aa22.21■■□□□ 1.15
CLP1-204ENST00000529773 PARP3Q9Y6F1 533 aa22.21■■□□□ 1.15
CLP1-204ENST00000529773 IGKV5-2P06315 115 aa22.2■■□□□ 1.14
CLP1-204ENST00000529773 NOB1Q9ULX3 412 aaKnown RBP22.2■■□□□ 1.14
CLP1-204ENST00000529773 NTSR2O95665 410 aa22.19■■□□□ 1.14
CLP1-204ENST00000529773 SERPINB2P05120 415 aa22.19■■□□□ 1.14
CLP1-204ENST00000529773 GPTP24298 496 aa22.19■■□□□ 1.14
CLP1-204ENST00000529773 BICDL1Q6ZP65 573 aa22.19■■□□□ 1.14
CLP1-204ENST00000529773 MYD88Q99836 296 aa22.19■■□□□ 1.14
CLP1-204ENST00000529773 API5Q9BZZ5 524 aaKnown RBP22.19■■□□□ 1.14
CLP1-204ENST00000529773 KIAA1551Q9HCM1 1747 aa22.18■■□□□ 1.14
CLP1-204ENST00000529773 ABCC4O15439 1325 aa22.18■■□□□ 1.14
CLP1-204ENST00000529773 F6X3S4 739 aa22.18■■□□□ 1.14
CLP1-204ENST00000529773 NEXNQ0ZGT2 675 aa22.18■■□□□ 1.14
CLP1-204ENST00000529773 BEND3Q5T5X7 828 aa22.18■■□□□ 1.14
CLP1-204ENST00000529773 CCDC191Q8NCU4 936 aa22.18■■□□□ 1.14
CLP1-204ENST00000529773 LINS1Q8NG48 757 aa22.18■■□□□ 1.14
CLP1-204ENST00000529773 LAMB2P55268 1798 aa22.17■■□□□ 1.14
CLP1-204ENST00000529773 IPO8O15397 1037 aaKnown RBP22.17■■□□□ 1.14
CLP1-204ENST00000529773 SUSD4Q5VX71 490 aa22.17■■□□□ 1.14
CLP1-204ENST00000529773 PRR5LQ6MZQ0 368 aa22.17■■□□□ 1.14
CLP1-204ENST00000529773 NYXQ9GZU5 481 aa22.17■■□□□ 1.14
CLP1-204ENST00000529773 ANKRD31Q8N7Z5 1873 aa22.17■■□□□ 1.14
CLP1-204ENST00000529773 NEURL1BA8MQ27 555 aa22.16■■□□□ 1.14
CLP1-204ENST00000529773 ATP5J2-PTCD1G3V325 749 aa22.16■■□□□ 1.14
CLP1-204ENST00000529773 TRIM27P14373 513 aa22.16■■□□□ 1.14
CLP1-204ENST00000529773 ATF7IPQ6VMQ6 1270 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms