RNA–Protein interactions for RNA: ENST00000529689.5

CCDC90B-214, Transcript of coiled-coil domain containing 90B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC90B, Length 4,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-214ENST00000529689 PDCL2Q8N4E4 241 aa11.68□□□□□ -0.54
CCDC90B-214ENST00000529689 NAT10Q9H0A0 1025 aaKnown RBP11.68□□□□□ -0.54
CCDC90B-214ENST00000529689 SH2B1Q9NRF2 756 aaPredicted RBP11.68□□□□□ -0.54
CCDC90B-214ENST00000529689 NSFL1CQ9UNZ2 370 aaKnown RBP11.68□□□□□ -0.54
CCDC90B-214ENST00000529689 SOS1Q07889 1333 aaPredicted RBP11.68□□□□□ -0.54
CCDC90B-214ENST00000529689 SERPINC1P01008 464 aa11.68□□□□□ -0.54
CCDC90B-214ENST00000529689 CCDC158Q5M9N0 1113 aa11.68□□□□□ -0.54
CCDC90B-214ENST00000529689 CABLES1Q8TDN4 633 aa11.68□□□□□ -0.54
CCDC90B-214ENST00000529689 RTL1A6NKG5 1358 aa11.68□□□□□ -0.54
CCDC90B-214ENST00000529689 HSP90AB3PQ58FF7 597 aa11.67□□□□□ -0.54
CCDC90B-214ENST00000529689 UBE2Q2Q8WVN8 375 aa11.67□□□□□ -0.54
CCDC90B-214ENST00000529689 SCAND2PQ9GZW5 306 aaPredicted RBP11.67□□□□□ -0.54
CCDC90B-214ENST00000529689 USP44Q9H0E7 712 aa11.67□□□□□ -0.54
CCDC90B-214ENST00000529689 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.67□□□□□ -0.54
CCDC90B-214ENST00000529689 CFAP45Q9UL16 551 aa11.67□□□□□ -0.54
CCDC90B-214ENST00000529689 V9GYY5 206 aaPredicted RBP11.67□□□□□ -0.54
CCDC90B-214ENST00000529689 OFD1O75665 1012 aa11.67□□□□□ -0.54
CCDC90B-214ENST00000529689 IFIT1P09914 478 aaKnown RBP11.67□□□□□ -0.54
CCDC90B-214ENST00000529689 KCNA6P17658 529 aa11.67□□□□□ -0.54
CCDC90B-214ENST00000529689 LUZP1Q86V48 1076 aa11.67□□□□□ -0.54
CCDC90B-214ENST00000529689 VPS37DQ86XT2 251 aa11.67□□□□□ -0.54
CCDC90B-214ENST00000529689 CCDC34Q96HJ3 373 aa11.67□□□□□ -0.54
CCDC90B-214ENST00000529689 ZNF396Q96N95 335 aaPredicted RBP11.67□□□□□ -0.54
CCDC90B-214ENST00000529689 TMX1Q9H3N1 280 aa11.67□□□□□ -0.54
CCDC90B-214ENST00000529689 PRDM11Q9NQV5 511 aa11.67□□□□□ -0.54
CCDC90B-214ENST00000529689 CLIP2Q9UDT6 1046 aa11.67□□□□□ -0.54
CCDC90B-214ENST00000529689 ANKRD24Q8TF21 1146 aa11.67□□□□□ -0.54
CCDC90B-214ENST00000529689 SBNO2Q9Y2G9 1366 aa11.66□□□□□ -0.54
CCDC90B-214ENST00000529689 SAFBQ15424 915 aaKnown RBP eCLIP11.66□□□□□ -0.54
CCDC90B-214ENST00000529689 ANO6Q4KMQ2 910 aa11.66□□□□□ -0.54
CCDC90B-214ENST00000529689 CCDC129Q6ZRS4 1044 aa11.66□□□□□ -0.54
CCDC90B-214ENST00000529689 NUP133Q8WUM0 1156 aa11.66□□□□□ -0.54
CCDC90B-214ENST00000529689 PHF23Q9BUL5 403 aaPredicted RBP11.66□□□□□ -0.54
CCDC90B-214ENST00000529689 DNAJC25Q9H1X3 360 aa11.66□□□□□ -0.54
CCDC90B-214ENST00000529689 ERBB4Q15303 1308 aa11.66□□□□□ -0.54
CCDC90B-214ENST00000529689 KDM5AP29375 1690 aaKnown RBP11.66□□□□□ -0.54
CCDC90B-214ENST00000529689 GPTP24298 496 aa11.66□□□□□ -0.54
CCDC90B-214ENST00000529689 ANAPC15P60006 121 aa11.66□□□□□ -0.54
CCDC90B-214ENST00000529689 PDE4CQ08493 712 aa11.66□□□□□ -0.54
CCDC90B-214ENST00000529689 SNX14Q9Y5W7 946 aa11.66□□□□□ -0.54
CCDC90B-214ENST00000529689 TRPM1Q7Z4N2 1603 aa11.66□□□□□ -0.54
CCDC90B-214ENST00000529689 GRM8O00222 908 aa11.66□□□□□ -0.54
CCDC90B-214ENST00000529689 TNNT1P13805 278 aa11.66□□□□□ -0.54
CCDC90B-214ENST00000529689 SKIDA1Q1XH10 827 aa11.66□□□□□ -0.54
CCDC90B-214ENST00000529689 NFATC2IPQ8NCF5 419 aa11.66□□□□□ -0.54
CCDC90B-214ENST00000529689 IL17REQ8NFR9 667 aa11.66□□□□□ -0.54
CCDC90B-214ENST00000529689 NEK1Q96PY6 1258 aa11.66□□□□□ -0.54
CCDC90B-214ENST00000529689 RAD21O60216 631 aa11.65□□□□□ -0.54
CCDC90B-214ENST00000529689 TPM3P06753 285 aa11.65□□□□□ -0.54
CCDC90B-214ENST00000529689 MTERF4Q7Z6M4 381 aaKnown RBP11.65□□□□□ -0.54
CCDC90B-214ENST00000529689 FSIP1Q8NA03 581 aa11.65□□□□□ -0.54
CCDC90B-214ENST00000529689 POGZQ7Z3K3 1410 aa11.65□□□□□ -0.54
CCDC90B-214ENST00000529689 KRT32Q14532 448 aa11.65□□□□□ -0.54
CCDC90B-214ENST00000529689 HOXC9P31274 260 aa11.65□□□□□ -0.54
CCDC90B-214ENST00000529689 MAPK8IP2Q13387 824 aaPredicted RBP11.65□□□□□ -0.54
CCDC90B-214ENST00000529689 ANKRD13DQ6ZTN6 518 aa11.65□□□□□ -0.54
CCDC90B-214ENST00000529689 CEP57L1Q8IYX8 460 aa11.65□□□□□ -0.54
CCDC90B-214ENST00000529689 KCNH5Q8NCM2 988 aa11.65□□□□□ -0.54
CCDC90B-214ENST00000529689 ERICH2A1L162 156 aa11.64□□□□□ -0.55
CCDC90B-214ENST00000529689 PTGS1P23219 599 aa11.64□□□□□ -0.55
CCDC90B-214ENST00000529689 PPP4R3BQ5MIZ7 849 aa11.64□□□□□ -0.55
CCDC90B-214ENST00000529689 CREB3L3Q68CJ9 461 aa11.64□□□□□ -0.55
CCDC90B-214ENST00000529689 LMBR1LQ6UX01 489 aa11.64□□□□□ -0.55
CCDC90B-214ENST00000529689 OLFM4Q6UX06 510 aa11.64□□□□□ -0.55
CCDC90B-214ENST00000529689 ERCC4Q92889 916 aaPredicted RBP11.64□□□□□ -0.55
CCDC90B-214ENST00000529689 HYPKQ9NX55 129 aa11.64□□□□□ -0.55
CCDC90B-214ENST00000529689 UHRF1BP1LA0JNW5 1464 aa11.64□□□□□ -0.55
CCDC90B-214ENST00000529689 A0A0U1RQG5 324 aaPredicted RBP11.64□□□□□ -0.55
CCDC90B-214ENST00000529689 RASEFQ8IZ41 740 aa11.64□□□□□ -0.55
CCDC90B-214ENST00000529689 PCMTD1Q96MG8 357 aaPredicted RBP11.64□□□□□ -0.55
CCDC90B-214ENST00000529689 ZFYVE9O95405 1425 aa11.64□□□□□ -0.55
CCDC90B-214ENST00000529689 SYNMO15061 1565 aa11.64□□□□□ -0.55
CCDC90B-214ENST00000529689 TNNT3P45378 269 aaPredicted RBP11.64□□□□□ -0.55
CCDC90B-214ENST00000529689 ZNF445P59923 1031 aa11.64□□□□□ -0.55
CCDC90B-214ENST00000529689 Q6ZUG5 572 aa11.64□□□□□ -0.55
CCDC90B-214ENST00000529689 BICC1Q9H694 974 aaKnown RBP11.64□□□□□ -0.55
CCDC90B-214ENST00000529689 FLT4P35916 1363 aa11.64□□□□□ -0.55
CCDC90B-214ENST00000529689 YEATS2Q9ULM3 1422 aa11.64□□□□□ -0.55
CCDC90B-214ENST00000529689 SGSM2O43147 1006 aa11.64□□□□□ -0.55
CCDC90B-214ENST00000529689 KSR2Q6VAB6 950 aa11.64□□□□□ -0.55
CCDC90B-214ENST00000529689 CFAP100Q494V2 611 aa11.63□□□□□ -0.55
CCDC90B-214ENST00000529689 TNRQ92752 1358 aa11.63□□□□□ -0.55
CCDC90B-214ENST00000529689 TIMM10P62072 90 aa11.63□□□□□ -0.55
CCDC90B-214ENST00000529689 PTH1RQ03431 593 aa11.63□□□□□ -0.55
CCDC90B-214ENST00000529689 AMOTQ4VCS5 1084 aa11.63□□□□□ -0.55
CCDC90B-214ENST00000529689 NOL7Q9UMY1 257 aaKnown RBP11.63□□□□□ -0.55
CCDC90B-214ENST00000529689 TBC1D2BQ9UPU7 963 aa11.63□□□□□ -0.55
CCDC90B-214ENST00000529689 DHX16O60231 1041 aaKnown RBP11.63□□□□□ -0.55
CCDC90B-214ENST00000529689 LTKP29376 864 aa11.63□□□□□ -0.55
CCDC90B-214ENST00000529689 CCAR1Q8IX12 1150 aaKnown RBP11.63□□□□□ -0.55
CCDC90B-214ENST00000529689 C8orf76Q96K31 380 aa11.63□□□□□ -0.55
CCDC90B-214ENST00000529689 ERICH4A6NGS2 130 aa11.62□□□□□ -0.55
CCDC90B-214ENST00000529689 BRD1O95696 1058 aa11.62□□□□□ -0.55
CCDC90B-214ENST00000529689 NBPF6Q5VWK0 638 aa11.62□□□□□ -0.55
CCDC90B-214ENST00000529689 NBPF4Q96M43 638 aa11.62□□□□□ -0.55
CCDC90B-214ENST00000529689 PTPN14Q15678 1187 aa11.62□□□□□ -0.55
CCDC90B-214ENST00000529689 METTL24Q5JXM2 366 aa11.62□□□□□ -0.55
CCDC90B-214ENST00000529689 INTS4Q96HW7 963 aaKnown RBP11.62□□□□□ -0.55
CCDC90B-214ENST00000529689 ABCF2Q9UG63 623 aa11.62□□□□□ -0.55
CCDC90B-214ENST00000529689 U3KPZ7 1027 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms