RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 NSFL1CQ9UNZ2 370 aaKnown RBP8.78□□□□□ -1
C11orf88-204ENST00000529661 ACIN1Q9UKV3 1341 aaKnown RBP8.78□□□□□ -1
C11orf88-204ENST00000529661 KHNYNO15037 678 aaKnown RBP8.77□□□□□ -1.01
C11orf88-204ENST00000529661 PRMT3O60678 531 aa8.77□□□□□ -1.01
C11orf88-204ENST00000529661 FGFR3P22607 806 aa8.77□□□□□ -1.01
C11orf88-204ENST00000529661 C1orf53Q5VUE5 145 aa8.77□□□□□ -1.01
C11orf88-204ENST00000529661 POTEAQ6S8J7 498 aa8.77□□□□□ -1.01
C11orf88-204ENST00000529661 ALDH16A1Q8IZ83 802 aa8.77□□□□□ -1.01
C11orf88-204ENST00000529661 STAG2Q8N3U4 1231 aa8.77□□□□□ -1.01
C11orf88-204ENST00000529661 SVOPQ8N4V2 548 aa8.77□□□□□ -1.01
C11orf88-204ENST00000529661 KLRG1Q96E93 195 aa8.77□□□□□ -1.01
C11orf88-204ENST00000529661 PRIMPOLQ96LW4 560 aa8.77□□□□□ -1.01
C11orf88-204ENST00000529661 WEE1P30291 646 aa8.76□□□□□ -1.01
C11orf88-204ENST00000529661 SWI5Q1ZZU3 235 aa8.76□□□□□ -1.01
C11orf88-204ENST00000529661 TMEM164Q5U3C3 297 aa8.76□□□□□ -1.01
C11orf88-204ENST00000529661 VTI1AQ96AJ9 217 aa8.76□□□□□ -1.01
C11orf88-204ENST00000529661 HSH2DQ96JZ2 352 aa8.76□□□□□ -1.01
C11orf88-204ENST00000529661 ARID3AQ99856 593 aa8.76□□□□□ -1.01
C11orf88-204ENST00000529661 NDFIP2Q9NV92 336 aa8.76□□□□□ -1.01
C11orf88-204ENST00000529661 GPC6Q9Y625 555 aaPredicted RBP8.76□□□□□ -1.01
C11orf88-204ENST00000529661 MAPTP10636 758 aaKnown RBP8.75□□□□□ -1.01
C11orf88-204ENST00000529661 BMP4P12644 408 aa8.75□□□□□ -1.01
C11orf88-204ENST00000529661 LYPD4Q6UWN0 246 aa8.75□□□□□ -1.01
C11orf88-204ENST00000529661 C7orf43Q8WVR3 580 aa8.75□□□□□ -1.01
C11orf88-204ENST00000529661 ARHGEF15O94989 841 aa8.74□□□□□ -1.01
C11orf88-204ENST00000529661 CD33P20138 364 aa8.74□□□□□ -1.01
C11orf88-204ENST00000529661 CTBSQ01459 385 aa8.74□□□□□ -1.01
C11orf88-204ENST00000529661 FAM69CQ0P6D2 419 aa8.74□□□□□ -1.01
C11orf88-204ENST00000529661 SAMD5Q5TGI4 173 aa8.74□□□□□ -1.01
C11orf88-204ENST00000529661 FOXO3O43524 673 aa8.73□□□□□ -1.01
C11orf88-204ENST00000529661 FAM157BP0CG42 384 aa8.73□□□□□ -1.01
C11orf88-204ENST00000529661 MAP2K3P46734 347 aa8.73□□□□□ -1.01
C11orf88-204ENST00000529661 TNP2Q05952 138 aa8.73□□□□□ -1.01
C11orf88-204ENST00000529661 SUSD3Q96L08 255 aa8.73□□□□□ -1.01
C11orf88-204ENST00000529661 ANKIB1Q9P2G1 1089 aa8.73□□□□□ -1.01
C11orf88-204ENST00000529661 ADAMTS8Q9UP79 889 aa8.73□□□□□ -1.01
C11orf88-204ENST00000529661 MAP3K10Q02779 954 aa8.72□□□□□ -1.01
C11orf88-204ENST00000529661 FKBP5Q13451 457 aaPredicted RBP8.72□□□□□ -1.01
C11orf88-204ENST00000529661 ZNF280CQ8ND82 737 aa8.72□□□□□ -1.01
C11orf88-204ENST00000529661 C2CD2LO14523 706 aa8.71□□□□□ -1.02
C11orf88-204ENST00000529661 PPP1R15AO75807 674 aaPredicted RBP8.71□□□□□ -1.02
C11orf88-204ENST00000529661 CELA2BP08218 269 aaPredicted RBP8.71□□□□□ -1.02
C11orf88-204ENST00000529661 RTN1Q16799 776 aa8.71□□□□□ -1.02
C11orf88-204ENST00000529661 ACDQ96AP0 544 aa8.71□□□□□ -1.02
C11orf88-204ENST00000529661 CEP63Q96MT8 703 aa8.71□□□□□ -1.02
C11orf88-204ENST00000529661 HCN2Q9UL51 889 aa8.71□□□□□ -1.02
C11orf88-204ENST00000529661 GSK3AP49840 483 aa8.7□□□□□ -1.02
C11orf88-204ENST00000529661 OCLNQ16625 522 aa8.7□□□□□ -1.02
C11orf88-204ENST00000529661 OXCT2Q9BYC2 517 aaPredicted RBP8.7□□□□□ -1.02
C11orf88-204ENST00000529661 STRN4Q9NRL3 753 aa8.7□□□□□ -1.02
C11orf88-204ENST00000529661 EFSO43281 561 aa8.69□□□□□ -1.02
C11orf88-204ENST00000529661 HIF1AQ16665 826 aa8.69□□□□□ -1.02
C11orf88-204ENST00000529661 MKNK1Q9BUB5 465 aa8.69□□□□□ -1.02
C11orf88-204ENST00000529661 QTRT2Q9H974 415 aaKnown RBP8.69□□□□□ -1.02
C11orf88-204ENST00000529661 KLK14Q9P0G3 267 aa8.69□□□□□ -1.02
C11orf88-204ENST00000529661 MARK1Q9P0L2 795 aa8.69□□□□□ -1.02
C11orf88-204ENST00000529661 DGKZQ13574 1117 aa8.68□□□□□ -1.02
C11orf88-204ENST00000529661 CLP1Q92989 425 aaKnown RBP8.68□□□□□ -1.02
C11orf88-204ENST00000529661 BRD7Q9NPI1 651 aa8.68□□□□□ -1.02
C11orf88-204ENST00000529661 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.68□□□□□ -1.02
C11orf88-204ENST00000529661 PRR12Q9ULL5 1215 aa8.68□□□□□ -1.02
C11orf88-204ENST00000529661 BCRP11274 1271 aa8.67□□□□□ -1.02
C11orf88-204ENST00000529661 TYRO3Q06418 890 aa8.67□□□□□ -1.02
C11orf88-204ENST00000529661 SFSWAPQ12872 951 aaKnown RBP8.67□□□□□ -1.02
C11orf88-204ENST00000529661 LAMC2Q13753 1193 aa8.67□□□□□ -1.02
C11orf88-204ENST00000529661 GRIN2CQ14957 1233 aa8.67□□□□□ -1.02
C11orf88-204ENST00000529661 FAM182BQ5T319 152 aa8.67□□□□□ -1.02
C11orf88-204ENST00000529661 BTLAQ7Z6A9 289 aa8.67□□□□□ -1.02
C11orf88-204ENST00000529661 CXXC1Q9P0U4 656 aaPredicted RBP8.67□□□□□ -1.02
C11orf88-204ENST00000529661 ATP2B4P23634 1241 aa8.66□□□□□ -1.02
C11orf88-204ENST00000529661 KCNMA1Q12791 1236 aa8.66□□□□□ -1.02
C11orf88-204ENST00000529661 GOLGA6L1Q8N7Z2 621 aa8.66□□□□□ -1.02
C11orf88-204ENST00000529661 SLAIN2Q9P270 581 aa8.66□□□□□ -1.02
C11orf88-204ENST00000529661 GGA1Q9UJY5 639 aa8.66□□□□□ -1.02
C11orf88-204ENST00000529661 GDF2Q9UK05 429 aaPredicted RBP8.66□□□□□ -1.02
C11orf88-204ENST00000529661 NEURL1BA8MQ27 555 aa8.65□□□□□ -1.02
C11orf88-204ENST00000529661 TGFBR3LH3BV60 316 aa8.65□□□□□ -1.02
C11orf88-204ENST00000529661 PCBP4P57723 403 aaKnown RBP8.65□□□□□ -1.02
C11orf88-204ENST00000529661 CAPN12Q6ZSI9 719 aa8.65□□□□□ -1.02
C11orf88-204ENST00000529661 NEDD1Q8NHV4 660 aa8.65□□□□□ -1.02
C11orf88-204ENST00000529661 ENAMQ9NRM1 1142 aa8.65□□□□□ -1.02
C11orf88-204ENST00000529661 BCS1LQ9Y276 419 aa8.65□□□□□ -1.02
C11orf88-204ENST00000529661 OIP5O43482 229 aa8.64□□□□□ -1.03
C11orf88-204ENST00000529661 ARAFP10398 606 aa8.64□□□□□ -1.03
C11orf88-204ENST00000529661 GALNT6Q8NCL4 622 aa8.64□□□□□ -1.03
C11orf88-204ENST00000529661 MYO19Q96H55 970 aa8.64□□□□□ -1.03
C11orf88-204ENST00000529661 KCNH4Q9UQ05 1017 aa8.64□□□□□ -1.03
C11orf88-204ENST00000529661 DNMT3AQ9Y6K1 912 aaPredicted RBP8.64□□□□□ -1.03
C11orf88-204ENST00000529661 ADH6P28332 368 aa8.63□□□□□ -1.03
C11orf88-204ENST00000529661 MARSP56192 900 aaKnown RBP8.63□□□□□ -1.03
C11orf88-204ENST00000529661 SPEM2Q0P670 501 aa8.63□□□□□ -1.03
C11orf88-204ENST00000529661 NAA30Q147X3 362 aaPredicted RBP8.63□□□□□ -1.03
C11orf88-204ENST00000529661 C11orf91Q3C1V1 193 aa8.63□□□□□ -1.03
C11orf88-204ENST00000529661 COX20Q5RI15 118 aa8.63□□□□□ -1.03
C11orf88-204ENST00000529661 ZNF468Q5VIY5 522 aaPredicted RBP8.63□□□□□ -1.03
C11orf88-204ENST00000529661 IER5Q5VY09 327 aa8.63□□□□□ -1.03
C11orf88-204ENST00000529661 SLCO4C1Q6ZQN7 724 aa8.63□□□□□ -1.03
C11orf88-204ENST00000529661 SAP130Q9H0E3 1048 aa8.63□□□□□ -1.03
C11orf88-204ENST00000529661 LRFN2Q9ULH4 789 aa8.63□□□□□ -1.03
C11orf88-204ENST00000529661 CARNS1A5YM72 827 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms