RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 HMOX1P09601 288 aa11.64□□□□□ -0.55
TGFBR3-208ENST00000529608 CHRM1P11229 460 aaPredicted RBP11.64□□□□□ -0.55
TGFBR3-208ENST00000529608 FSTL1Q12841 308 aa11.64□□□□□ -0.55
TGFBR3-208ENST00000529608 AKAP4Q5JQC9 854 aa11.64□□□□□ -0.55
TGFBR3-208ENST00000529608 DIEXFQ68CQ4 756 aaKnown RBP11.64□□□□□ -0.55
TGFBR3-208ENST00000529608 COL15A1P39059 1388 aa11.64□□□□□ -0.55
TGFBR3-208ENST00000529608 CACNA1SQ13698 1873 aa11.63□□□□□ -0.55
TGFBR3-208ENST00000529608 KDM2BQ8NHM5 1336 aa11.63□□□□□ -0.55
TGFBR3-208ENST00000529608 SCN7AQ01118 1682 aa11.63□□□□□ -0.55
TGFBR3-208ENST00000529608 EIF4G2P78344 907 aaKnown RBP eCLIP11.63□□□□□ -0.55
TGFBR3-208ENST00000529608 C16orf71Q8IYS4 520 aaPredicted RBP11.63□□□□□ -0.55
TGFBR3-208ENST00000529608 NARFQ9UHQ1 456 aa11.63□□□□□ -0.55
TGFBR3-208ENST00000529608 FER1L6Q2WGJ9 1857 aa11.63□□□□□ -0.55
TGFBR3-208ENST00000529608 DICER1Q9UPY3 1922 aaKnown RBP11.62□□□□□ -0.55
TGFBR3-208ENST00000529608 POTECB2RU33 542 aa11.62□□□□□ -0.55
TGFBR3-208ENST00000529608 NFKBIEO00221 500 aa11.62□□□□□ -0.55
TGFBR3-208ENST00000529608 ZPR1O75312 459 aa11.62□□□□□ -0.55
TGFBR3-208ENST00000529608 SERPINB2P05120 415 aa11.62□□□□□ -0.55
TGFBR3-208ENST00000529608 MTHFSDQ2M296 383 aaKnown RBP11.62□□□□□ -0.55
TGFBR3-208ENST00000529608 AMER1Q5JTC6 1135 aaPredicted RBP11.62□□□□□ -0.55
TGFBR3-208ENST00000529608 PCNTO95613 3336 aa11.62□□□□□ -0.55
TGFBR3-208ENST00000529608 GLTPD2A6NH11 291 aa11.6□□□□□ -0.55
TGFBR3-208ENST00000529608 CANXP27824 592 aaKnown RBP11.6□□□□□ -0.55
TGFBR3-208ENST00000529608 ASTLQ6HA08 431 aaPredicted RBP11.6□□□□□ -0.55
TGFBR3-208ENST00000529608 CCDC24Q8N4L8 307 aa11.6□□□□□ -0.55
TGFBR3-208ENST00000529608 COL3A1P02461 1466 aaPredicted RBP11.59□□□□□ -0.55
TGFBR3-208ENST00000529608 SLX4Q8IY92 1834 aa11.59□□□□□ -0.55
TGFBR3-208ENST00000529608 LMNB1P20700 586 aa11.59□□□□□ -0.55
TGFBR3-208ENST00000529608 BICDL1Q6ZP65 573 aa11.59□□□□□ -0.55
TGFBR3-208ENST00000529608 C2CD5Q86YS7 1000 aa11.59□□□□□ -0.55
TGFBR3-208ENST00000529608 SMC1BQ8NDV3 1235 aa11.59□□□□□ -0.55
TGFBR3-208ENST00000529608 BMP2KQ9NSY1 1161 aaPredicted RBP11.59□□□□□ -0.55
TGFBR3-208ENST00000529608 KNSTRNQ9Y448 316 aa11.59□□□□□ -0.55
TGFBR3-208ENST00000529608 BCORQ6W2J9 1755 aa11.59□□□□□ -0.55
TGFBR3-208ENST00000529608 ATMINO43313 823 aaPredicted RBP11.58□□□□□ -0.56
TGFBR3-208ENST00000529608 TIE1P35590 1138 aa11.58□□□□□ -0.56
TGFBR3-208ENST00000529608 EIF5P55010 431 aaKnown RBP11.58□□□□□ -0.56
TGFBR3-208ENST00000529608 TBC1D9BQ66K14 1250 aa11.58□□□□□ -0.56
TGFBR3-208ENST00000529608 TTLL6Q8N841 843 aa11.58□□□□□ -0.56
TGFBR3-208ENST00000529608 PCDHB8Q9UN66 801 aa11.58□□□□□ -0.56
TGFBR3-208ENST00000529608 ARFGEF2Q9Y6D5 1785 aa11.58□□□□□ -0.56
TGFBR3-208ENST00000529608 ZC3H4Q9UPT8 1303 aaKnown RBP11.58□□□□□ -0.56
TGFBR3-208ENST00000529608 PER1O15534 1290 aaPredicted RBP11.57□□□□□ -0.56
TGFBR3-208ENST00000529608 VEGFAP15692 232 aaPredicted RBP11.57□□□□□ -0.56
TGFBR3-208ENST00000529608 VSIG10Q8N0Z9 540 aa11.57□□□□□ -0.56
TGFBR3-208ENST00000529608 ZNF496Q96IT1 587 aaPredicted RBP11.57□□□□□ -0.56
TGFBR3-208ENST00000529608 KIF7Q2M1P5 1343 aa11.57□□□□□ -0.56
TGFBR3-208ENST00000529608 H0YIN7 160 aa11.56□□□□□ -0.56
TGFBR3-208ENST00000529608 POTEJP0CG39 1038 aa11.56□□□□□ -0.56
TGFBR3-208ENST00000529608 PRR5LQ6MZQ0 368 aa11.56□□□□□ -0.56
TGFBR3-208ENST00000529608 IL17REQ8NFR9 667 aa11.56□□□□□ -0.56
TGFBR3-208ENST00000529608 TBC1D2BQ9UPU7 963 aa11.56□□□□□ -0.56
TGFBR3-208ENST00000529608 HEG1Q9ULI3 1381 aa11.55□□□□□ -0.56
TGFBR3-208ENST00000529608 KCNQ3O43525 872 aa11.55□□□□□ -0.56
TGFBR3-208ENST00000529608 C21orf2O43822 256 aa11.55□□□□□ -0.56
TGFBR3-208ENST00000529608 HSPA1AP0DMV8 641 aaKnown RBP11.55□□□□□ -0.56
TGFBR3-208ENST00000529608 HSPA1BP0DMV9 641 aaKnown RBP11.55□□□□□ -0.56
TGFBR3-208ENST00000529608 DIAPH1O60610 1272 aaKnown RBP11.54□□□□□ -0.56
TGFBR3-208ENST00000529608 ATN1P54259 1190 aaPredicted RBP11.54□□□□□ -0.56
TGFBR3-208ENST00000529608 CC2D1BQ5T0F9 858 aaKnown RBP11.54□□□□□ -0.56
TGFBR3-208ENST00000529608 TNS4Q8IZW8 715 aa11.54□□□□□ -0.56
TGFBR3-208ENST00000529608 ZNF622Q969S3 477 aaKnown RBP eCLIP11.54□□□□□ -0.564e-6■■□□□ 13.5
TGFBR3-208ENST00000529608 TTLL13PA6NNM8 815 aa11.53□□□□□ -0.56
TGFBR3-208ENST00000529608 A1BGP04217 495 aa11.53□□□□□ -0.56
TGFBR3-208ENST00000529608 PIP4K2AP48426 406 aaPredicted RBP11.53□□□□□ -0.56
TGFBR3-208ENST00000529608 ZNF790Q6PG37 636 aa11.53□□□□□ -0.56
TGFBR3-208ENST00000529608 ZNF467Q7Z7K2 595 aaPredicted RBP11.53□□□□□ -0.56
TGFBR3-208ENST00000529608 PRAMEF22A3QJZ6 481 aa11.52□□□□□ -0.57
TGFBR3-208ENST00000529608 DDNO94850 711 aaPredicted RBP11.52□□□□□ -0.57
TGFBR3-208ENST00000529608 CAMTA2O94983 1202 aa11.52□□□□□ -0.57
TGFBR3-208ENST00000529608 TTC5Q8N0Z6 440 aa11.52□□□□□ -0.57
TGFBR3-208ENST00000529608 BRIP1Q9BX63 1249 aa11.52□□□□□ -0.57
TGFBR3-208ENST00000529608 ZNF330Q9Y3S2 320 aaPredicted RBP11.52□□□□□ -0.57
TGFBR3-208ENST00000529608 STARD3NLO95772 234 aa11.51□□□□□ -0.57
TGFBR3-208ENST00000529608 IL6STP40189 918 aaPredicted RBP11.51□□□□□ -0.57
TGFBR3-208ENST00000529608 CNGB1Q14028 1251 aaPredicted RBP11.51□□□□□ -0.57
TGFBR3-208ENST00000529608 ERFEQ4G0M1 354 aa11.51□□□□□ -0.57
TGFBR3-208ENST00000529608 PHACTR3Q96KR7 559 aa11.51□□□□□ -0.57
TGFBR3-208ENST00000529608 CEMIPQ8WUJ3 1361 aa11.51□□□□□ -0.57
TGFBR3-208ENST00000529608 ADAMTSL1Q8N6G6 1762 aa11.5□□□□□ -0.57
TGFBR3-208ENST00000529608 A0A087WZG4 1122 aa11.5□□□□□ -0.57
TGFBR3-208ENST00000529608 GNAT3A8MTJ3 354 aa11.5□□□□□ -0.57
TGFBR3-208ENST00000529608 SRGNP10124 158 aa11.5□□□□□ -0.57
TGFBR3-208ENST00000529608 PDE6BP35913 854 aa11.5□□□□□ -0.57
TGFBR3-208ENST00000529608 USP16Q9Y5T5 823 aa11.5□□□□□ -0.57
TGFBR3-208ENST00000529608 LTBP3Q9NS15 1303 aa11.5□□□□□ -0.57
TGFBR3-208ENST00000529608 SCN4AP35499 1836 aa11.49□□□□□ -0.57
TGFBR3-208ENST00000529608 U2SURPO15042 1029 aaKnown RBP11.49□□□□□ -0.57
TGFBR3-208ENST00000529608 TEFQ10587 303 aa11.49□□□□□ -0.57
TGFBR3-208ENST00000529608 DPY19L2Q6NUT2 758 aa11.49□□□□□ -0.57
TGFBR3-208ENST00000529608 PRPF40BQ6NWY9 871 aaKnown RBP11.49□□□□□ -0.57
TGFBR3-208ENST00000529608 OLFM4Q6UX06 510 aa11.49□□□□□ -0.57
TGFBR3-208ENST00000529608 C7orf43Q8WVR3 580 aa11.49□□□□□ -0.57
TGFBR3-208ENST00000529608 RNF25Q96BH1 459 aaPredicted RBP11.49□□□□□ -0.57
TGFBR3-208ENST00000529608 TAOK3Q9H2K8 898 aa11.49□□□□□ -0.57
TGFBR3-208ENST00000529608 MKRN1Q9UHC7 482 aaKnown RBP11.49□□□□□ -0.57
TGFBR3-208ENST00000529608 CNBD1Q8NA66 436 aa11.48□□□□□ -0.57
TGFBR3-208ENST00000529608 FMNL2Q96PY5 1086 aa11.48□□□□□ -0.57
TGFBR3-208ENST00000529608 TMEM106CQ9BVX2 250 aa11.48□□□□□ -0.57
TGFBR3-208ENST00000529608 PASKQ96RG2 1323 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms