RNA–Protein interactions for RNA: ENST00000529472.1

CHD7-209, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 788 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-209ENST00000529472 SSH1Q8WYL5 1049 aa14.62□□□□□ -0.07
CHD7-209ENST00000529472 ZBTB3Q9H5J0 574 aa14.62□□□□□ -0.07
CHD7-209ENST00000529472 SMC4Q9NTJ3 1288 aa14.62□□□□□ -0.07
CHD7-209ENST00000529472 GYS1P13807 737 aa14.61□□□□□ -0.07
CHD7-209ENST00000529472 FKBP8Q14318 412 aa14.61□□□□□ -0.07
CHD7-209ENST00000529472 SLC16A10Q8TF71 515 aa14.61□□□□□ -0.07
CHD7-209ENST00000529472 ZNF428Q96B54 188 aa14.61□□□□□ -0.07
CHD7-209ENST00000529472 ATF5Q9Y2D1 282 aaPredicted RBP14.61□□□□□ -0.07
CHD7-209ENST00000529472 MAP3K15Q6ZN16 1313 aa14.61□□□□□ -0.07
CHD7-209ENST00000529472 ARFGEF2Q9Y6D5 1785 aa14.6□□□□□ -0.07
CHD7-209ENST00000529472 RARSP54136 660 aaKnown RBP14.6□□□□□ -0.07
CHD7-209ENST00000529472 FLIIQ13045 1269 aa14.6□□□□□ -0.07
CHD7-209ENST00000529472 ALDH1L2Q3SY69 923 aa14.6□□□□□ -0.07
CHD7-209ENST00000529472 MTFR1LQ9H019 292 aa14.6□□□□□ -0.07
CHD7-209ENST00000529472 NUP98P52948 1817 aa14.59□□□□□ -0.07
CHD7-209ENST00000529472 FKBP5Q13451 457 aaPredicted RBP14.59□□□□□ -0.07
CHD7-209ENST00000529472 HLFQ16534 295 aa14.59□□□□□ -0.07
CHD7-209ENST00000529472 MRPL50Q8N5N7 158 aaKnown RBP14.59□□□□□ -0.07
CHD7-209ENST00000529472 BCL2L12Q9HB09 334 aa14.59□□□□□ -0.07
CHD7-209ENST00000529472 ZNF652Q9Y2D9 606 aa14.59□□□□□ -0.07
CHD7-209ENST00000529472 GOLGB1Q14789 3259 aaKnown RBP14.58□□□□□ -0.07
CHD7-209ENST00000529472 ERVV-1B6SEH8 477 aa14.58□□□□□ -0.08
CHD7-209ENST00000529472 DDX58O95786 925 aaKnown RBP14.58□□□□□ -0.08
CHD7-209ENST00000529472 BICDL1Q6ZP65 573 aa14.58□□□□□ -0.08
CHD7-209ENST00000529472 ANKRD13DQ6ZTN6 518 aa14.58□□□□□ -0.08
CHD7-209ENST00000529472 NLGN1Q8N2Q7 840 aa14.58□□□□□ -0.08
CHD7-209ENST00000529472 MMP10P09238 476 aa14.57□□□□□ -0.08
CHD7-209ENST00000529472 TBC1D9BQ66K14 1250 aa14.57□□□□□ -0.08
CHD7-209ENST00000529472 RIC3Q7Z5B4 369 aa14.57□□□□□ -0.08
CHD7-209ENST00000529472 PLBD2Q8NHP8 589 aa14.57□□□□□ -0.08
CHD7-209ENST00000529472 ADCY9O60503 1353 aa14.57□□□□□ -0.08
CHD7-209ENST00000529472 ANKRD36CQ5JPF3 1778 aa14.57□□□□□ -0.08
CHD7-209ENST00000529472 COL24A1Q17RW2 1714 aa14.56□□□□□ -0.08
CHD7-209ENST00000529472 PI4KAP2A4QPH2 592 aa14.56□□□□□ -0.08
CHD7-209ENST00000529472 BCAR3O75815 825 aa14.56□□□□□ -0.08
CHD7-209ENST00000529472 GPTP24298 496 aa14.56□□□□□ -0.08
CHD7-209ENST00000529472 CLEC4GQ6UXB4 293 aa14.56□□□□□ -0.08
CHD7-209ENST00000529472 GIGYF2Q6Y7W6 1299 aaKnown RBP14.56□□□□□ -0.08
CHD7-209ENST00000529472 PI4KAP1Q8N8J0 262 aa14.56□□□□□ -0.08
CHD7-209ENST00000529472 SPON1Q9HCB6 807 aa14.56□□□□□ -0.08
CHD7-209ENST00000529472 MAP3K2Q9Y2U5 619 aa14.56□□□□□ -0.08
CHD7-209ENST00000529472 POLD1P28340 1107 aa14.55□□□□□ -0.08
CHD7-209ENST00000529472 DDR1Q08345 913 aa14.55□□□□□ -0.08
CHD7-209ENST00000529472 NFIXQ14938 502 aa14.55□□□□□ -0.08
CHD7-209ENST00000529472 RCAN3Q9UKA8 241 aa14.55□□□□□ -0.08
CHD7-209ENST00000529472 NIP7Q9Y221 180 aaKnown RBP eCLIP14.55□□□□□ -0.08
CHD7-209ENST00000529472 ATP10DQ9P241 1426 aa14.55□□□□□ -0.08
CHD7-209ENST00000529472 F6X3S4 739 aa14.54□□□□□ -0.08
CHD7-209ENST00000529472 RGL2O15211 777 aa14.54□□□□□ -0.08
CHD7-209ENST00000529472 PTGER2P43116 358 aa14.54□□□□□ -0.08
CHD7-209ENST00000529472 KSR2Q6VAB6 950 aa14.54□□□□□ -0.08
CHD7-209ENST00000529472 FRAT1Q92837 279 aaPredicted RBP14.54□□□□□ -0.08
CHD7-209ENST00000529472 SETDB2Q96T68 719 aa14.54□□□□□ -0.08
CHD7-209ENST00000529472 NOB1Q9ULX3 412 aaKnown RBP14.54□□□□□ -0.08
CHD7-209ENST00000529472 KIF16BQ96L93 1317 aa14.54□□□□□ -0.08
CHD7-209ENST00000529472 CARMIL3Q8ND23 1372 aa14.54□□□□□ -0.08
CHD7-209ENST00000529472 PTPRCP08575 1304 aa14.53□□□□□ -0.08
CHD7-209ENST00000529472 UBN2Q6ZU65 1347 aa14.53□□□□□ -0.08
CHD7-209ENST00000529472 FAM177BA6PVY3 158 aa14.53□□□□□ -0.08
CHD7-209ENST00000529472 ATP5J2-PTCD1G3V325 749 aa14.53□□□□□ -0.08
CHD7-209ENST00000529472 POLRMTO00411 1230 aaKnown RBP14.53□□□□□ -0.08
CHD7-209ENST00000529472 TM4SF1P30408 202 aa14.53□□□□□ -0.08
CHD7-209ENST00000529472 TCIRG1Q13488 830 aa14.53□□□□□ -0.08
CHD7-209ENST00000529472 HSP90AB3PQ58FF7 597 aa14.53□□□□□ -0.08
CHD7-209ENST00000529472 MYD88Q99836 296 aa14.53□□□□□ -0.08
CHD7-209ENST00000529472 PARP3Q9Y6F1 533 aa14.53□□□□□ -0.08
CHD7-209ENST00000529472 AFDNP55196 1824 aaKnown RBP14.52□□□□□ -0.08
CHD7-209ENST00000529472 BRPF1P55201 1214 aaPredicted RBP14.52□□□□□ -0.09
CHD7-209ENST00000529472 SLC4A10Q6U841 1118 aa14.52□□□□□ -0.09
CHD7-209ENST00000529472 DNAAF4Q8WXU2 420 aa14.52□□□□□ -0.09
CHD7-209ENST00000529472 SGIP1Q9BQI5 828 aa14.52□□□□□ -0.09
CHD7-209ENST00000529472 METTL22Q9BUU2 404 aaPredicted RBP14.52□□□□□ -0.09
CHD7-209ENST00000529472 NPHP1O15259 732 aa14.51□□□□□ -0.09
CHD7-209ENST00000529472 NEXNQ0ZGT2 675 aa14.51□□□□□ -0.09
CHD7-209ENST00000529472 NBPF5PQ86XG9 351 aaPredicted RBP14.51□□□□□ -0.09
CHD7-209ENST00000529472 ZNF34Q8IZ26 560 aa14.51□□□□□ -0.09
CHD7-209ENST00000529472 LRP5O75197 1615 aa14.51□□□□□ -0.09
CHD7-209ENST00000529472 SERPINB2P05120 415 aa14.5□□□□□ -0.09
CHD7-209ENST00000529472 ISCA1Q9BUE6 129 aa14.5□□□□□ -0.09
CHD7-209ENST00000529472 PPP1R1BQ9UD71 204 aaPredicted RBP14.5□□□□□ -0.09
CHD7-209ENST00000529472 IPO8O15397 1037 aaKnown RBP14.49□□□□□ -0.09
CHD7-209ENST00000529472 IGKV5-2P06315 115 aa14.49□□□□□ -0.09
CHD7-209ENST00000529472 CWF19L2Q2TBE0 894 aaKnown RBP14.49□□□□□ -0.09
CHD7-209ENST00000529472 PARP10Q53GL7 1025 aa14.49□□□□□ -0.09
CHD7-209ENST00000529472 SUSD4Q5VX71 490 aa14.49□□□□□ -0.09
CHD7-209ENST00000529472 NLRP10Q86W26 655 aa14.49□□□□□ -0.09
CHD7-209ENST00000529472 KLHL34Q8N239 644 aa14.49□□□□□ -0.09
CHD7-209ENST00000529472 CCDC24Q8N4L8 307 aa14.49□□□□□ -0.09
CHD7-209ENST00000529472 CNBD1Q8NA66 436 aa14.49□□□□□ -0.09
CHD7-209ENST00000529472 API5Q9BZZ5 524 aaKnown RBP14.49□□□□□ -0.09
CHD7-209ENST00000529472 NRXN2Q9P2S2 1712 aa14.49□□□□□ -0.09
CHD7-209ENST00000529472 NEURL1BA8MQ27 555 aa14.48□□□□□ -0.09
CHD7-209ENST00000529472 TRIM27P14373 513 aa14.48□□□□□ -0.09
CHD7-209ENST00000529472 ZKSCAN2Q63HK3 967 aa14.48□□□□□ -0.09
CHD7-209ENST00000529472 ATF7IPQ6VMQ6 1270 aa14.48□□□□□ -0.09
CHD7-209ENST00000529472 PPP1R42Q7Z4L9 355 aa14.48□□□□□ -0.09
CHD7-209ENST00000529472 NUTM1Q86Y26 1132 aa14.48□□□□□ -0.09
CHD7-209ENST00000529472 UTP14AQ9BVJ6 771 aaKnown RBP14.48□□□□□ -0.09
CHD7-209ENST00000529472 CWC25Q9NXE8 425 aaPredicted RBP14.48□□□□□ -0.09
CHD7-209ENST00000529472 TNNQ9UQP3 1299 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms