RNA–Protein interactions for RNA: ENST00000529386.5

CMTM1-212, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 924 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-212ENST00000529386 SMIM5Q71RC9 77 aa17.97■□□□□ 0.47
CMTM1-212ENST00000529386 LRP10Q7Z4F1 713 aa17.97■□□□□ 0.47
CMTM1-212ENST00000529386 PLBD2Q8NHP8 589 aa17.97■□□□□ 0.47
CMTM1-212ENST00000529386 C4AP0C0L4 1744 aa17.97■□□□□ 0.47
CMTM1-212ENST00000529386 CAMTA2O94983 1202 aa17.96■□□□□ 0.47
CMTM1-212ENST00000529386 FKBP5Q13451 457 aaPredicted RBP17.96■□□□□ 0.47
CMTM1-212ENST00000529386 TTLL7Q6ZT98 887 aa17.96■□□□□ 0.47
CMTM1-212ENST00000529386 RIC3Q7Z5B4 369 aa17.96■□□□□ 0.47
CMTM1-212ENST00000529386 PHAXQ9H814 394 aaKnown RBP17.96■□□□□ 0.47
CMTM1-212ENST00000529386 SRP68Q9UHB9 627 aaKnown RBP17.96■□□□□ 0.47
CMTM1-212ENST00000529386 PTPRCP08575 1304 aa17.96■□□□□ 0.46
CMTM1-212ENST00000529386 KIF16BQ96L93 1317 aa17.96■□□□□ 0.46
CMTM1-212ENST00000529386 IPO8O15397 1037 aaKnown RBP17.95■□□□□ 0.46
CMTM1-212ENST00000529386 GYS1P13807 737 aa17.95■□□□□ 0.46
CMTM1-212ENST00000529386 POLD1P28340 1107 aa17.95■□□□□ 0.46
CMTM1-212ENST00000529386 BRPF1P55201 1214 aaPredicted RBP17.95■□□□□ 0.46
CMTM1-212ENST00000529386 MRPL50Q8N5N7 158 aaKnown RBP17.95■□□□□ 0.46
CMTM1-212ENST00000529386 ZBTB3Q9H5J0 574 aa17.95■□□□□ 0.46
CMTM1-212ENST00000529386 CASZ1Q86V15 1759 aa17.94■□□□□ 0.46
CMTM1-212ENST00000529386 KSR2Q6VAB6 950 aa17.94■□□□□ 0.46
CMTM1-212ENST00000529386 GIGYF2Q6Y7W6 1299 aaKnown RBP17.94■□□□□ 0.46
CMTM1-212ENST00000529386 BCL2L13Q9BXK5 485 aa17.94■□□□□ 0.46
CMTM1-212ENST00000529386 ZBTB7AO95365 584 aa17.93■□□□□ 0.46
CMTM1-212ENST00000529386 NEXNQ0ZGT2 675 aa17.93■□□□□ 0.46
CMTM1-212ENST00000529386 SETDB2Q96T68 719 aa17.93■□□□□ 0.46
CMTM1-212ENST00000529386 SPON1Q9HCB6 807 aa17.93■□□□□ 0.46
CMTM1-212ENST00000529386 RCAN3Q9UKA8 241 aa17.93■□□□□ 0.46
CMTM1-212ENST00000529386 SCN7AQ01118 1682 aa17.93■□□□□ 0.46
CMTM1-212ENST00000529386 BCORQ6W2J9 1755 aa17.92■□□□□ 0.46
CMTM1-212ENST00000529386 FKBP8Q14318 412 aa17.92■□□□□ 0.46
CMTM1-212ENST00000529386 PDGFDQ9GZP0 370 aaPredicted RBP17.92■□□□□ 0.46
CMTM1-212ENST00000529386 NUP98P52948 1817 aa17.91■□□□□ 0.46
CMTM1-212ENST00000529386 PI4KAP2A4QPH2 592 aa17.91■□□□□ 0.46
CMTM1-212ENST00000529386 MSL1Q68DK7 614 aa17.91■□□□□ 0.46
CMTM1-212ENST00000529386 G2E3Q7L622 706 aa17.91■□□□□ 0.46
CMTM1-212ENST00000529386 PI4KAP1Q8N8J0 262 aa17.91■□□□□ 0.46
CMTM1-212ENST00000529386 ARHGAP45Q92619 1136 aa17.91■□□□□ 0.46
CMTM1-212ENST00000529386 API5Q9BZZ5 524 aaKnown RBP17.91■□□□□ 0.46
CMTM1-212ENST00000529386 PARP3Q9Y6F1 533 aa17.91■□□□□ 0.46
CMTM1-212ENST00000529386 TCIRG1Q13488 830 aa17.9■□□□□ 0.46
CMTM1-212ENST00000529386 HLFQ16534 295 aa17.9■□□□□ 0.46
CMTM1-212ENST00000529386 PARP10Q53GL7 1025 aa17.9■□□□□ 0.46
CMTM1-212ENST00000529386 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.9■□□□□ 0.46
CMTM1-212ENST00000529386 DNAAF4Q8WXU2 420 aa17.9■□□□□ 0.46
CMTM1-212ENST00000529386 BCL2L12Q9HB09 334 aa17.9■□□□□ 0.46
CMTM1-212ENST00000529386 NIP7Q9Y221 180 aaKnown RBP eCLIP17.9■□□□□ 0.46
CMTM1-212ENST00000529386 ATF5Q9Y2D1 282 aaPredicted RBP17.9■□□□□ 0.46
CMTM1-212ENST00000529386 MAP3K2Q9Y2U5 619 aa17.9■□□□□ 0.46
CMTM1-212ENST00000529386 ATP10DQ9P241 1426 aa17.89■□□□□ 0.46
CMTM1-212ENST00000529386 NPHP1O15259 732 aa17.89■□□□□ 0.45
CMTM1-212ENST00000529386 MMP10P09238 476 aa17.89■□□□□ 0.45
CMTM1-212ENST00000529386 BICDL1Q6ZP65 573 aa17.89■□□□□ 0.45
CMTM1-212ENST00000529386 FRAT1Q92837 279 aaPredicted RBP17.89■□□□□ 0.45
CMTM1-212ENST00000529386 METTL22Q9BUU2 404 aaPredicted RBP17.89■□□□□ 0.45
CMTM1-212ENST00000529386 NOB1Q9ULX3 412 aaKnown RBP17.89■□□□□ 0.45
CMTM1-212ENST00000529386 CARMIL3Q8ND23 1372 aa17.89■□□□□ 0.45
CMTM1-212ENST00000529386 BCAR3O75815 825 aa17.88■□□□□ 0.45
CMTM1-212ENST00000529386 MS4A1P11836 297 aa17.88■□□□□ 0.45
CMTM1-212ENST00000529386 NFIXQ14938 502 aa17.88■□□□□ 0.45
CMTM1-212ENST00000529386 TBC1D9BQ66K14 1250 aa17.88■□□□□ 0.45
CMTM1-212ENST00000529386 PPP1R42Q7Z4L9 355 aa17.88■□□□□ 0.45
CMTM1-212ENST00000529386 NYXQ9GZU5 481 aa17.88■□□□□ 0.45
CMTM1-212ENST00000529386 ARFGEF2Q9Y6D5 1785 aa17.87■□□□□ 0.45
CMTM1-212ENST00000529386 TM4SF1P30408 202 aa17.87■□□□□ 0.45
CMTM1-212ENST00000529386 ZKSCAN2Q63HK3 967 aa17.87■□□□□ 0.45
CMTM1-212ENST00000529386 MYD88Q99836 296 aa17.87■□□□□ 0.45
CMTM1-212ENST00000529386 GPTP24298 496 aa17.86■□□□□ 0.45
CMTM1-212ENST00000529386 GTF2E1P29083 439 aaPredicted RBP17.86■□□□□ 0.45
CMTM1-212ENST00000529386 TRIM28Q13263 835 aaKnown RBP17.86■□□□□ 0.45
CMTM1-212ENST00000529386 TPTE2Q6XPS3 522 aa17.86■□□□□ 0.45
CMTM1-212ENST00000529386 NBPF5PQ86XG9 351 aaPredicted RBP17.86■□□□□ 0.45
CMTM1-212ENST00000529386 ZNF34Q8IZ26 560 aa17.86■□□□□ 0.45
CMTM1-212ENST00000529386 ADCY9O60503 1353 aa17.86■□□□□ 0.45
CMTM1-212ENST00000529386 HSP90B1P14625 803 aaKnown RBP17.85■□□□□ 0.45
CMTM1-212ENST00000529386 ANKRD36CQ5JPF3 1778 aa17.85■□□□□ 0.45
CMTM1-212ENST00000529386 RNF123Q5XPI4 1314 aa17.85■□□□□ 0.45
CMTM1-212ENST00000529386 SLC4A10Q6U841 1118 aa17.85■□□□□ 0.45
CMTM1-212ENST00000529386 ATF7IPQ6VMQ6 1270 aa17.85■□□□□ 0.45
CMTM1-212ENST00000529386 CCDC191Q8NCU4 936 aa17.85■□□□□ 0.45
CMTM1-212ENST00000529386 LINS1Q8NG48 757 aa17.85■□□□□ 0.45
CMTM1-212ENST00000529386 PPP1R1BQ9UD71 204 aaPredicted RBP17.85■□□□□ 0.45
CMTM1-212ENST00000529386 POLRMTO00411 1230 aaKnown RBP17.84■□□□□ 0.45
CMTM1-212ENST00000529386 SERPINB2P05120 415 aa17.84■□□□□ 0.45
CMTM1-212ENST00000529386 CNBD1Q8NA66 436 aa17.84■□□□□ 0.45
CMTM1-212ENST00000529386 ISCA1Q9BUE6 129 aa17.84■□□□□ 0.45
CMTM1-212ENST00000529386 UTP14AQ9BVJ6 771 aaKnown RBP17.84■□□□□ 0.45
CMTM1-212ENST00000529386 CWC25Q9NXE8 425 aaPredicted RBP17.84■□□□□ 0.45
CMTM1-212ENST00000529386 COL24A1Q17RW2 1714 aa17.84■□□□□ 0.45
CMTM1-212ENST00000529386 IBTKQ9P2D0 1353 aaPredicted RBP17.83■□□□□ 0.45
CMTM1-212ENST00000529386 F6X3S4 739 aa17.83■□□□□ 0.44
CMTM1-212ENST00000529386 ATP5J2-PTCD1G3V325 749 aa17.83■□□□□ 0.44
CMTM1-212ENST00000529386 CCT4P50991 539 aaKnown RBP17.83■□□□□ 0.44
CMTM1-212ENST00000529386 ST5P78524 1137 aa17.83■□□□□ 0.44
CMTM1-212ENST00000529386 NLRP10Q86W26 655 aa17.83■□□□□ 0.44
CMTM1-212ENST00000529386 FTSJ3Q8IY81 847 aaKnown RBP17.83■□□□□ 0.44
CMTM1-212ENST00000529386 SRCIN1Q9C0H9 1055 aa17.83■□□□□ 0.44
CMTM1-212ENST00000529386 ALDH1L1O75891 902 aa17.82■□□□□ 0.44
CMTM1-212ENST00000529386 PTGER2P43116 358 aa17.82■□□□□ 0.44
CMTM1-212ENST00000529386 DDR1Q08345 913 aa17.82■□□□□ 0.44
CMTM1-212ENST00000529386 TRMT112Q9UI30 125 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms