RNA–Protein interactions for RNA: ENST00000529307.1

CAPRIN1-207, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAPRIN1, Length 2,266 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-207ENST00000529307 POLA2Q14181 598 aa20.6■□□□□ 0.89
CAPRIN1-207ENST00000529307 ANKRD13DQ6ZTN6 518 aa20.6■□□□□ 0.89
CAPRIN1-207ENST00000529307 METTL22Q9BUU2 404 aaPredicted RBP20.6■□□□□ 0.89
CAPRIN1-207ENST00000529307 PDCL3Q9H2J4 239 aa20.6■□□□□ 0.89
CAPRIN1-207ENST00000529307 THRAP3Q9Y2W1 955 aaKnown RBP20.6■□□□□ 0.89
CAPRIN1-207ENST00000529307 ITGB4P16144 1822 aa20.6■□□□□ 0.89
CAPRIN1-207ENST00000529307 C9orf78Q9NZ63 289 aaPredicted RBP20.59■□□□□ 0.89
CAPRIN1-207ENST00000529307 ERBB4Q15303 1308 aa20.58■□□□□ 0.89
CAPRIN1-207ENST00000529307 IBTKQ9P2D0 1353 aaPredicted RBP20.58■□□□□ 0.89
CAPRIN1-207ENST00000529307 BCL9O00512 1426 aa20.58■□□□□ 0.89
CAPRIN1-207ENST00000529307 UTYO14607 1347 aa20.58■□□□□ 0.88
CAPRIN1-207ENST00000529307 GSPT1P15170 499 aaKnown RBP20.58■□□□□ 0.88
CAPRIN1-207ENST00000529307 MYD88Q99836 296 aa20.58■□□□□ 0.88
CAPRIN1-207ENST00000529307 NWD2Q9ULI1 1742 aa20.58■□□□□ 0.88
CAPRIN1-207ENST00000529307 LRP6O75581 1613 aa20.57■□□□□ 0.88
CAPRIN1-207ENST00000529307 JCADQ9P266 1359 aa20.57■□□□□ 0.88
CAPRIN1-207ENST00000529307 NEURL1BA8MQ27 555 aa20.57■□□□□ 0.88
CAPRIN1-207ENST00000529307 GRM8O00222 908 aa20.57■□□□□ 0.88
CAPRIN1-207ENST00000529307 KAZALD1Q96I82 304 aa20.57■□□□□ 0.88
CAPRIN1-207ENST00000529307 CDCA7Q9BWT1 371 aaPredicted RBP20.57■□□□□ 0.88
CAPRIN1-207ENST00000529307 SRGAP3O43295 1099 aa20.57■□□□□ 0.88
CAPRIN1-207ENST00000529307 FGD1P98174 961 aa20.56■□□□□ 0.88
CAPRIN1-207ENST00000529307 DDB1Q16531 1140 aa20.56■□□□□ 0.88
CAPRIN1-207ENST00000529307 TTLL7Q6ZT98 887 aa20.56■□□□□ 0.88
CAPRIN1-207ENST00000529307 SUCLG2Q96I99 432 aa20.56■□□□□ 0.88
CAPRIN1-207ENST00000529307 A0A0U1RQG5 324 aaPredicted RBP20.55■□□□□ 0.88
CAPRIN1-207ENST00000529307 GCKRQ14397 625 aa20.55■□□□□ 0.88
CAPRIN1-207ENST00000529307 C8orf37Q96NL8 207 aa20.55■□□□□ 0.88
CAPRIN1-207ENST00000529307 CCDC9Q9Y3X0 531 aaKnown RBP20.55■□□□□ 0.88
CAPRIN1-207ENST00000529307 NEXNQ0ZGT2 675 aa20.55■□□□□ 0.88
CAPRIN1-207ENST00000529307 MTX1Q13505 466 aa20.55■□□□□ 0.88
CAPRIN1-207ENST00000529307 DNAJC10Q8IXB1 793 aa20.55■□□□□ 0.88
CAPRIN1-207ENST00000529307 MARCH10Q8NA82 808 aaPredicted RBP20.55■□□□□ 0.88
CAPRIN1-207ENST00000529307 PLBD2Q8NHP8 589 aa20.55■□□□□ 0.88
CAPRIN1-207ENST00000529307 SLC4A9Q96Q91 983 aa20.55■□□□□ 0.88
CAPRIN1-207ENST00000529307 LRRCC1Q9C099 1032 aa20.55■□□□□ 0.88
CAPRIN1-207ENST00000529307 PRDM4Q9UKN5 801 aa20.55■□□□□ 0.88
CAPRIN1-207ENST00000529307 BCL9LQ86UU0 1499 aa20.54■□□□□ 0.88
CAPRIN1-207ENST00000529307 PRIM1P49642 420 aaKnown RBP20.54■□□□□ 0.88
CAPRIN1-207ENST00000529307 TTC22Q5TAA0 569 aa20.54■□□□□ 0.88
CAPRIN1-207ENST00000529307 UNC5CLQ8IV45 518 aa20.54■□□□□ 0.88
CAPRIN1-207ENST00000529307 CERKQ8TCT0 537 aa20.54■□□□□ 0.88
CAPRIN1-207ENST00000529307 ARFGEF2Q9Y6D5 1785 aa20.54■□□□□ 0.88
CAPRIN1-207ENST00000529307 TPM2P07951 284 aa20.53■□□□□ 0.88
CAPRIN1-207ENST00000529307 BARGINQ6ZT62 677 aa20.53■□□□□ 0.88
CAPRIN1-207ENST00000529307 SYTL4Q96C24 671 aaPredicted RBP20.53■□□□□ 0.88
CAPRIN1-207ENST00000529307 SALL3Q9BXA9 1300 aa20.53■□□□□ 0.88
CAPRIN1-207ENST00000529307 RBM42Q9BTD8 480 aaKnown RBP20.53■□□□□ 0.88
CAPRIN1-207ENST00000529307 ATP5J2-PTCD1G3V325 749 aa20.52■□□□□ 0.88
CAPRIN1-207ENST00000529307 SURF6O75683 361 aaKnown RBP20.52■□□□□ 0.88
CAPRIN1-207ENST00000529307 XRCC6P12956 609 aaKnown RBP eCLIP20.52■□□□□ 0.88
CAPRIN1-207ENST00000529307 NGLY1Q96IV0 654 aa20.52■□□□□ 0.88
CAPRIN1-207ENST00000529307 BICC1Q9H694 974 aaKnown RBP20.52■□□□□ 0.88
CAPRIN1-207ENST00000529307 KAT6BQ8WYB5 2073 aa20.51■□□□□ 0.87
CAPRIN1-207ENST00000529307 DOT1LQ8TEK3 1739 aa20.51■□□□□ 0.87
CAPRIN1-207ENST00000529307 JARID2Q92833 1246 aaPredicted RBP20.51■□□□□ 0.87
CAPRIN1-207ENST00000529307 MFAP1P55081 439 aaKnown RBP20.51■□□□□ 0.87
CAPRIN1-207ENST00000529307 TBC1D32Q96NH3 1257 aa20.51■□□□□ 0.87
CAPRIN1-207ENST00000529307 PDE1AP54750 535 aa20.5■□□□□ 0.87
CAPRIN1-207ENST00000529307 AEBP2Q6ZN18 517 aaPredicted RBP20.5■□□□□ 0.87
CAPRIN1-207ENST00000529307 EPHA10Q5JZY3 1008 aa20.5■□□□□ 0.87
CAPRIN1-207ENST00000529307 TSHZ3Q63HK5 1081 aa20.5■□□□□ 0.87
CAPRIN1-207ENST00000529307 OSBPL3Q9H4L5 887 aa20.5■□□□□ 0.87
CAPRIN1-207ENST00000529307 IL1RAPL2Q9NP60 686 aa20.5■□□□□ 0.87
CAPRIN1-207ENST00000529307 FSD2A1L4K1 749 aa20.49■□□□□ 0.87
CAPRIN1-207ENST00000529307 GOLGA6L3A6NEY3 463 aa20.49■□□□□ 0.87
CAPRIN1-207ENST00000529307 TBC1D9Q6ZT07 1266 aa20.49■□□□□ 0.87
CAPRIN1-207ENST00000529307 ACSBG1Q96GR2 724 aa20.49■□□□□ 0.87
CAPRIN1-207ENST00000529307 VPS72Q15906 364 aa20.48■□□□□ 0.87
CAPRIN1-207ENST00000529307 FAM98CQ17RN3 349 aaKnown RBP20.48■□□□□ 0.87
CAPRIN1-207ENST00000529307 NUP188Q5SRE5 1749 aa20.48■□□□□ 0.87
CAPRIN1-207ENST00000529307 FNBP4Q8N3X1 1017 aaPredicted RBP20.48■□□□□ 0.87
CAPRIN1-207ENST00000529307 TEX13AQ9BXU3 409 aaPredicted RBP20.48■□□□□ 0.87
CAPRIN1-207ENST00000529307 ZBTB3Q9H5J0 574 aa20.48■□□□□ 0.87
CAPRIN1-207ENST00000529307 PA2G4Q9UQ80 394 aaKnown RBP20.48■□□□□ 0.87
CAPRIN1-207ENST00000529307 RAB11FIP3O75154 756 aa20.48■□□□□ 0.87
CAPRIN1-207ENST00000529307 RHPN1Q8TCX5 695 aa20.48■□□□□ 0.87
CAPRIN1-207ENST00000529307 HDAC5Q9UQL6 1122 aa20.47■□□□□ 0.87
CAPRIN1-207ENST00000529307 SDSP20132 328 aa20.47■□□□□ 0.87
CAPRIN1-207ENST00000529307 UPF2Q9HAU5 1272 aaKnown RBP20.47■□□□□ 0.87
CAPRIN1-207ENST00000529307 AFDNP55196 1824 aaKnown RBP20.46■□□□□ 0.87
CAPRIN1-207ENST00000529307 CYP19A1P11511 503 aaPredicted RBP20.46■□□□□ 0.87
CAPRIN1-207ENST00000529307 CASP7P55210 303 aa20.46■□□□□ 0.87
CAPRIN1-207ENST00000529307 STARD3NLO95772 234 aa20.46■□□□□ 0.87
CAPRIN1-207ENST00000529307 UBE3BQ7Z3V4 1068 aa20.46■□□□□ 0.87
CAPRIN1-207ENST00000529307 SPATA31A6Q5VVP1 1343 aa20.46■□□□□ 0.87
CAPRIN1-207ENST00000529307 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.46■□□□□ 0.87
CAPRIN1-207ENST00000529307 A0A087WZG4 1122 aa20.45■□□□□ 0.86
CAPRIN1-207ENST00000529307 CDC45O75419 566 aa20.45■□□□□ 0.86
CAPRIN1-207ENST00000529307 MX1P20591 662 aa20.45■□□□□ 0.86
CAPRIN1-207ENST00000529307 ZNF330Q9Y3S2 320 aaPredicted RBP20.45■□□□□ 0.86
CAPRIN1-207ENST00000529307 HSPA1LP34931 641 aa20.44■□□□□ 0.86
CAPRIN1-207ENST00000529307 KIF1BPQ96EK5 621 aa20.44■□□□□ 0.86
CAPRIN1-207ENST00000529307 NUTM1Q86Y26 1132 aa20.44■□□□□ 0.86
CAPRIN1-207ENST00000529307 C22orf23Q9BZE7 217 aa20.44■□□□□ 0.86
CAPRIN1-207ENST00000529307 STAP2Q9UGK3 403 aa20.44■□□□□ 0.86
CAPRIN1-207ENST00000529307 A0A0G2JS52 829 aa20.43■□□□□ 0.86
CAPRIN1-207ENST00000529307 H7C1W4 665 aa20.42■□□□□ 0.86
CAPRIN1-207ENST00000529307 USP21Q9UK80 565 aa20.42■□□□□ 0.86
CAPRIN1-207ENST00000529307 ZBTB1Q9Y2K1 713 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms