RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 ZBTB3Q9H5J0 574 aa14.61□□□□□ -0.07
CAPN1-217ENST00000529133 SRP68Q9UHB9 627 aaKnown RBP14.61□□□□□ -0.07
CAPN1-217ENST00000529133 USP42Q9H9J4 1324 aaKnown RBP14.61□□□□□ -0.07
CAPN1-217ENST00000529133 BCORQ6W2J9 1755 aa14.6□□□□□ -0.07
CAPN1-217ENST00000529133 DDX58O95786 925 aaKnown RBP14.6□□□□□ -0.07
CAPN1-217ENST00000529133 RFC4P35249 363 aa14.6□□□□□ -0.07
CAPN1-217ENST00000529133 ANKRD13DQ6ZTN6 518 aa14.6□□□□□ -0.07
CAPN1-217ENST00000529133 PLBD2Q8NHP8 589 aa14.6□□□□□ -0.07
CAPN1-217ENST00000529133 FRAT1Q92837 279 aaPredicted RBP14.6□□□□□ -0.07
CAPN1-217ENST00000529133 NARFQ9UHQ1 456 aa14.6□□□□□ -0.07
CAPN1-217ENST00000529133 ERVV-1B6SEH8 477 aa14.59□□□□□ -0.07
CAPN1-217ENST00000529133 ZKSCAN2Q63HK3 967 aa14.59□□□□□ -0.07
CAPN1-217ENST00000529133 KSR2Q6VAB6 950 aa14.59□□□□□ -0.07
CAPN1-217ENST00000529133 ARHGAP45Q92619 1136 aa14.59□□□□□ -0.07
CAPN1-217ENST00000529133 BCL2L12Q9HB09 334 aa14.59□□□□□ -0.07
CAPN1-217ENST00000529133 PI4KAP2A4QPH2 592 aa14.58□□□□□ -0.08
CAPN1-217ENST00000529133 F6X3S4 739 aa14.58□□□□□ -0.08
CAPN1-217ENST00000529133 RGL2O15211 777 aa14.58□□□□□ -0.08
CAPN1-217ENST00000529133 IPO8O15397 1037 aaKnown RBP14.58□□□□□ -0.08
CAPN1-217ENST00000529133 MSH5O43196 834 aa14.58□□□□□ -0.08
CAPN1-217ENST00000529133 ZPR1O75312 459 aa14.58□□□□□ -0.08
CAPN1-217ENST00000529133 TRIM27P14373 513 aa14.58□□□□□ -0.08
CAPN1-217ENST00000529133 R3HDM1Q15032 1099 aaKnown RBP14.58□□□□□ -0.08
CAPN1-217ENST00000529133 HLFQ16534 295 aa14.58□□□□□ -0.08
CAPN1-217ENST00000529133 USPL1Q5W0Q7 1092 aa14.58□□□□□ -0.08
CAPN1-217ENST00000529133 RIC3Q7Z5B4 369 aa14.58□□□□□ -0.08
CAPN1-217ENST00000529133 PI4KAP1Q8N8J0 262 aa14.58□□□□□ -0.08
CAPN1-217ENST00000529133 API5Q9BZZ5 524 aaKnown RBP14.58□□□□□ -0.08
CAPN1-217ENST00000529133 TNNQ9UQP3 1299 aa14.58□□□□□ -0.08
CAPN1-217ENST00000529133 MAP3K2Q9Y2U5 619 aa14.58□□□□□ -0.08
CAPN1-217ENST00000529133 ARFGEF2Q9Y6D5 1785 aa14.57□□□□□ -0.08
CAPN1-217ENST00000529133 CACNA1FO60840 1977 aa14.57□□□□□ -0.08
CAPN1-217ENST00000529133 RRP1P56182 461 aaKnown RBP14.57□□□□□ -0.08
CAPN1-217ENST00000529133 ATF7IPQ6VMQ6 1270 aa14.57□□□□□ -0.08
CAPN1-217ENST00000529133 DNAAF4Q8WXU2 420 aa14.57□□□□□ -0.08
CAPN1-217ENST00000529133 PDGFDQ9GZP0 370 aaPredicted RBP14.57□□□□□ -0.08
CAPN1-217ENST00000529133 PXDNLA1KZ92 1463 aa14.57□□□□□ -0.08
CAPN1-217ENST00000529133 CASZ1Q86V15 1759 aa14.56□□□□□ -0.08
CAPN1-217ENST00000529133 PLIN1O60240 522 aa14.56□□□□□ -0.08
CAPN1-217ENST00000529133 GYS1P13807 737 aa14.56□□□□□ -0.08
CAPN1-217ENST00000529133 GIGYF2Q6Y7W6 1299 aaKnown RBP14.56□□□□□ -0.08
CAPN1-217ENST00000529133 METTL22Q9BUU2 404 aaPredicted RBP14.56□□□□□ -0.08
CAPN1-217ENST00000529133 ZNF652Q9Y2D9 606 aa14.56□□□□□ -0.08
CAPN1-217ENST00000529133 ABCC4O15439 1325 aa14.56□□□□□ -0.08
CAPN1-217ENST00000529133 RNF123Q5XPI4 1314 aa14.56□□□□□ -0.08
CAPN1-217ENST00000529133 ATP10DQ9P241 1426 aa14.56□□□□□ -0.08
CAPN1-217ENST00000529133 PSDA5PKW4 1024 aaPredicted RBP14.55□□□□□ -0.08
CAPN1-217ENST00000529133 FKBP8Q14318 412 aa14.55□□□□□ -0.08
CAPN1-217ENST00000529133 CLEC4GQ6UXB4 293 aa14.55□□□□□ -0.08
CAPN1-217ENST00000529133 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.55□□□□□ -0.08
CAPN1-217ENST00000529133 MYD88Q99836 296 aa14.55□□□□□ -0.08
CAPN1-217ENST00000529133 SUPT16HQ9Y5B9 1047 aaKnown RBP14.55□□□□□ -0.08
CAPN1-217ENST00000529133 TCIRG1Q13488 830 aa14.54□□□□□ -0.08
CAPN1-217ENST00000529133 HSP90AB3PQ58FF7 597 aa14.54□□□□□ -0.08
CAPN1-217ENST00000529133 SLC4A10Q6U841 1118 aa14.54□□□□□ -0.08
CAPN1-217ENST00000529133 CLUAP1Q96AJ1 413 aa14.54□□□□□ -0.08
CAPN1-217ENST00000529133 ATP5J2-PTCD1G3V325 749 aa14.53□□□□□ -0.08
CAPN1-217ENST00000529133 RLBP1P12271 317 aa14.53□□□□□ -0.08
CAPN1-217ENST00000529133 BEND3Q5T5X7 828 aa14.53□□□□□ -0.08
CAPN1-217ENST00000529133 TBC1D9BQ66K14 1250 aa14.53□□□□□ -0.08
CAPN1-217ENST00000529133 DZIP1LQ8IYY4 767 aaKnown RBP14.53□□□□□ -0.08
CAPN1-217ENST00000529133 ZNF34Q8IZ26 560 aa14.53□□□□□ -0.08
CAPN1-217ENST00000529133 ISCA1Q9BUE6 129 aa14.53□□□□□ -0.08
CAPN1-217ENST00000529133 UBN2Q6ZU65 1347 aa14.52□□□□□ -0.08
CAPN1-217ENST00000529133 IGKV5-2P06315 115 aa14.52□□□□□ -0.09
CAPN1-217ENST00000529133 GPTP24298 496 aa14.52□□□□□ -0.09
CAPN1-217ENST00000529133 NEXNQ0ZGT2 675 aa14.52□□□□□ -0.09
CAPN1-217ENST00000529133 NFIXQ14938 502 aa14.52□□□□□ -0.09
CAPN1-217ENST00000529133 MSL1Q68DK7 614 aa14.52□□□□□ -0.09
CAPN1-217ENST00000529133 FTSJ3Q8IY81 847 aaKnown RBP14.52□□□□□ -0.09
CAPN1-217ENST00000529133 NLGN1Q8N2Q7 840 aa14.52□□□□□ -0.09
CAPN1-217ENST00000529133 LINS1Q8NG48 757 aa14.52□□□□□ -0.09
CAPN1-217ENST00000529133 PANK1Q8TE04 598 aa14.52□□□□□ -0.09
CAPN1-217ENST00000529133 SLC16A10Q8TF71 515 aa14.52□□□□□ -0.09
CAPN1-217ENST00000529133 NIP7Q9Y221 180 aaKnown RBP eCLIP14.52□□□□□ -0.09
CAPN1-217ENST00000529133 ANKRD36CQ5JPF3 1778 aa14.52□□□□□ -0.09
CAPN1-217ENST00000529133 MS4A1P11836 297 aa14.51□□□□□ -0.09
CAPN1-217ENST00000529133 CCT4P50991 539 aaKnown RBP14.51□□□□□ -0.09
CAPN1-217ENST00000529133 TRIM28Q13263 835 aaKnown RBP14.51□□□□□ -0.09
CAPN1-217ENST00000529133 CWF19L2Q2TBE0 894 aaKnown RBP14.51□□□□□ -0.09
CAPN1-217ENST00000529133 C20orf194Q5TEA3 1177 aa14.51□□□□□ -0.09
CAPN1-217ENST00000529133 INTS3Q68E01 1043 aaKnown RBP14.51□□□□□ -0.09
CAPN1-217ENST00000529133 BICDL1Q6ZP65 573 aa14.51□□□□□ -0.09
CAPN1-217ENST00000529133 TMEM57Q8N5G2 664 aa14.51□□□□□ -0.09
CAPN1-217ENST00000529133 SRCIN1Q9C0H9 1055 aa14.51□□□□□ -0.09
CAPN1-217ENST00000529133 N4BP2Q86UW6 1770 aaPredicted RBP14.51□□□□□ -0.09
CAPN1-217ENST00000529133 NUP98P52948 1817 aa14.5□□□□□ -0.09
CAPN1-217ENST00000529133 COL24A1Q17RW2 1714 aa14.5□□□□□ -0.09
CAPN1-217ENST00000529133 NEURL1BA8MQ27 555 aa14.5□□□□□ -0.09
CAPN1-217ENST00000529133 ALDH1L1O75891 902 aa14.5□□□□□ -0.09
CAPN1-217ENST00000529133 ZBTB7AO95365 584 aa14.5□□□□□ -0.09
CAPN1-217ENST00000529133 TM4SF1P30408 202 aa14.5□□□□□ -0.09
CAPN1-217ENST00000529133 DDR1Q08345 913 aa14.5□□□□□ -0.09
CAPN1-217ENST00000529133 PDE3AQ14432 1141 aa14.5□□□□□ -0.09
CAPN1-217ENST00000529133 NLRP10Q86W26 655 aa14.5□□□□□ -0.09
CAPN1-217ENST00000529133 CARMIL3Q8ND23 1372 aa14.49□□□□□ -0.09
CAPN1-217ENST00000529133 IBTKQ9P2D0 1353 aaPredicted RBP14.49□□□□□ -0.09
CAPN1-217ENST00000529133 PARP10Q53GL7 1025 aa14.49□□□□□ -0.09
CAPN1-217ENST00000529133 CCDC191Q8NCU4 936 aa14.49□□□□□ -0.09
CAPN1-217ENST00000529133 SETDB2Q96T68 719 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms