RNA–Protein interactions for RNA: ENST00000528932.1

TRIM3-207, Transcript of tripartite motif containing 3, humanhuman

TSL 4

Gene TRIM3, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-207ENST00000528932 ST5P78524 1137 aa16.8■□□□□ 0.28
TRIM3-207ENST00000528932 CFAP53Q96M91 514 aa16.8■□□□□ 0.28
TRIM3-207ENST00000528932 ARFGEF2Q9Y6D5 1785 aa16.79■□□□□ 0.28
TRIM3-207ENST00000528932 U2AF1L5P0DN76 240 aaPredicted RBP16.79■□□□□ 0.28
TRIM3-207ENST00000528932 U2AF1Q01081 240 aaKnown RBP eCLIP16.79■□□□□ 0.28
TRIM3-207ENST00000528932 DCTN1Q14203 1278 aa16.79■□□□□ 0.28
TRIM3-207ENST00000528932 DPY19L2Q6NUT2 758 aa16.79■□□□□ 0.28
TRIM3-207ENST00000528932 TAOK3Q9H2K8 898 aa16.79■□□□□ 0.28
TRIM3-207ENST00000528932 PRPF40BQ6NWY9 871 aaKnown RBP16.78■□□□□ 0.28
TRIM3-207ENST00000528932 PDZRN3Q9UPQ7 1066 aa16.78■□□□□ 0.28
TRIM3-207ENST00000528932 FAM177BA6PVY3 158 aa16.77■□□□□ 0.28
TRIM3-207ENST00000528932 CAPN15O75808 1086 aa16.77■□□□□ 0.28
TRIM3-207ENST00000528932 DDNO94850 711 aaPredicted RBP16.77■□□□□ 0.28
TRIM3-207ENST00000528932 SRGNP10124 158 aa16.77■□□□□ 0.28
TRIM3-207ENST00000528932 RTF1Q92541 710 aaKnown RBP16.77■□□□□ 0.28
TRIM3-207ENST00000528932 CNKSR1Q969H4 720 aa16.77■□□□□ 0.28
TRIM3-207ENST00000528932 NUDCQ9Y266 331 aa16.77■□□□□ 0.28
TRIM3-207ENST00000528932 STYK1Q6J9G0 422 aa16.76■□□□□ 0.27
TRIM3-207ENST00000528932 NBPF5PQ86XG9 351 aaPredicted RBP16.76■□□□□ 0.27
TRIM3-207ENST00000528932 MASTLQ96GX5 879 aa16.76■□□□□ 0.27
TRIM3-207ENST00000528932 SNRPA1P09661 255 aaKnown RBP16.75■□□□□ 0.27
TRIM3-207ENST00000528932 POTEIP0CG38 1075 aa16.75■□□□□ 0.27
TRIM3-207ENST00000528932 POTEJP0CG39 1038 aa16.75■□□□□ 0.27
TRIM3-207ENST00000528932 PPP2R1AP30153 589 aa16.75■□□□□ 0.27
TRIM3-207ENST00000528932 NBPF26B4DH59 902 aa16.74■□□□□ 0.27
TRIM3-207ENST00000528932 NBPF10Q6P3W6 841 aaKnown RBP16.74■□□□□ 0.27
TRIM3-207ENST00000528932 NBPF15Q8N660 670 aa16.74■□□□□ 0.27
TRIM3-207ENST00000528932 MIS18AQ9NYP9 233 aa16.74■□□□□ 0.27
TRIM3-207ENST00000528932 DLG5Q8TDM6 1919 aa16.74■□□□□ 0.27
TRIM3-207ENST00000528932 LTBP3Q9NS15 1303 aa16.73■□□□□ 0.27
TRIM3-207ENST00000528932 HSPA1AP0DMV8 641 aaKnown RBP16.73■□□□□ 0.27
TRIM3-207ENST00000528932 HSPA1BP0DMV9 641 aaKnown RBP16.73■□□□□ 0.27
TRIM3-207ENST00000528932 OLFM4Q6UX06 510 aa16.73■□□□□ 0.27
TRIM3-207ENST00000528932 NIP7Q9Y221 180 aaKnown RBP eCLIP16.73■□□□□ 0.27
TRIM3-207ENST00000528932 TNS4Q8IZW8 715 aa16.72■□□□□ 0.27
TRIM3-207ENST00000528932 NGEFQ8N5V2 710 aa16.72■□□□□ 0.27
TRIM3-207ENST00000528932 ZNF652Q9Y2D9 606 aa16.72■□□□□ 0.27
TRIM3-207ENST00000528932 LAMB4A4D0S4 1761 aa16.72■□□□□ 0.27
TRIM3-207ENST00000528932 HLFQ16534 295 aa16.71■□□□□ 0.27
TRIM3-207ENST00000528932 SOGA3Q5TF21 947 aa16.71■□□□□ 0.27
TRIM3-207ENST00000528932 CHADLQ6NUI6 762 aa16.71■□□□□ 0.27
TRIM3-207ENST00000528932 CLEC4GQ6UXB4 293 aa16.71■□□□□ 0.27
TRIM3-207ENST00000528932 ZNF277Q9NRM2 450 aaPredicted RBP16.71■□□□□ 0.27
TRIM3-207ENST00000528932 MKRN1Q9UHC7 482 aaKnown RBP16.71■□□□□ 0.27
TRIM3-207ENST00000528932 NPR1P16066 1061 aa16.7■□□□□ 0.26
TRIM3-207ENST00000528932 CCDC93Q567U6 631 aa16.7■□□□□ 0.26
TRIM3-207ENST00000528932 NUP98P52948 1817 aa16.69■□□□□ 0.26
TRIM3-207ENST00000528932 TPTE2Q6XPS3 522 aa16.69■□□□□ 0.26
TRIM3-207ENST00000528932 C7orf43Q8WVR3 580 aa16.69■□□□□ 0.26
TRIM3-207ENST00000528932 ZNF541Q9H0D2 1346 aa16.69■□□□□ 0.26
TRIM3-207ENST00000528932 SCN4AP35499 1836 aa16.68■□□□□ 0.26
TRIM3-207ENST00000528932 GTF2E1P29083 439 aaPredicted RBP16.68■□□□□ 0.26
TRIM3-207ENST00000528932 TAF7Q15545 349 aaPredicted RBP16.68■□□□□ 0.26
TRIM3-207ENST00000528932 KDM3BQ7LBC6 1761 aa16.68■□□□□ 0.26
TRIM3-207ENST00000528932 PCNTO95613 3336 aa16.68■□□□□ 0.26
TRIM3-207ENST00000528932 FKBP4Q02790 459 aaKnown RBP eCLIP16.67■□□□□ 0.26
TRIM3-207ENST00000528932 EAPPQ56P03 285 aaPredicted RBP16.67■□□□□ 0.26
TRIM3-207ENST00000528932 HTATSF1O43719 755 aaKnown RBP16.66■□□□□ 0.26
TRIM3-207ENST00000528932 NUTM1Q86Y26 1132 aa16.66■□□□□ 0.26
TRIM3-207ENST00000528932 THUMPD2Q9BTF0 503 aaKnown RBP16.66■□□□□ 0.26
TRIM3-207ENST00000528932 TAF1DQ9H5J8 278 aaPredicted RBP16.66■□□□□ 0.26
TRIM3-207ENST00000528932 CREBZFQ9NS37 354 aa16.66■□□□□ 0.26
TRIM3-207ENST00000528932 ABCC12Q96J65 1359 aa16.65■□□□□ 0.26
TRIM3-207ENST00000528932 IQCA1LA6NCM1 817 aa16.65■□□□□ 0.26
TRIM3-207ENST00000528932 CLEC11AQ9Y240 323 aa16.65■□□□□ 0.26
TRIM3-207ENST00000528932 RRP7AQ9Y3A4 280 aaKnown RBP16.65■□□□□ 0.26
TRIM3-207ENST00000528932 KLRG2A4D1S0 409 aaPredicted RBP16.64■□□□□ 0.25
TRIM3-207ENST00000528932 MYL6BP14649 208 aa16.64■□□□□ 0.25
TRIM3-207ENST00000528932 LDHDQ86WU2 507 aa16.64■□□□□ 0.25
TRIM3-207ENST00000528932 SYNE4Q8N205 404 aa16.64■□□□□ 0.25
TRIM3-207ENST00000528932 L3MBTL3Q96JM7 780 aaPredicted RBP16.64■□□□□ 0.25
TRIM3-207ENST00000528932 NEFMP07197 916 aa16.63■□□□□ 0.25
TRIM3-207ENST00000528932 GPTP24298 496 aa16.63■□□□□ 0.25
TRIM3-207ENST00000528932 IARSP41252 1262 aaKnown RBP16.63■□□□□ 0.25
TRIM3-207ENST00000528932 TTLL7Q6ZT98 887 aa16.63■□□□□ 0.25
TRIM3-207ENST00000528932 SLC51AQ86UW1 340 aa16.63■□□□□ 0.25
TRIM3-207ENST00000528932 RTKN2Q8IZC4 609 aa16.63■□□□□ 0.25
TRIM3-207ENST00000528932 RNF123Q5XPI4 1314 aa16.63■□□□□ 0.25
TRIM3-207ENST00000528932 TCERG1O14776 1098 aaKnown RBP16.62■□□□□ 0.25
TRIM3-207ENST00000528932 ALDH1B1P30837 517 aa16.62■□□□□ 0.25
TRIM3-207ENST00000528932 ZBTB3Q9H5J0 574 aa16.62■□□□□ 0.25
TRIM3-207ENST00000528932 HACL1Q9UJ83 578 aa16.62■□□□□ 0.25
TRIM3-207ENST00000528932 EPHX2P34913 555 aa16.61■□□□□ 0.25
TRIM3-207ENST00000528932 EIF4A1P60842 406 aaKnown RBP16.61■□□□□ 0.25
TRIM3-207ENST00000528932 KIF6Q6ZMV9 814 aa16.61■□□□□ 0.25
TRIM3-207ENST00000528932 MAP3K15Q6ZN16 1313 aa16.61■□□□□ 0.25
TRIM3-207ENST00000528932 PASKQ96RG2 1323 aa16.61■□□□□ 0.25
TRIM3-207ENST00000528932 ADAMTSL1Q8N6G6 1762 aa16.6■□□□□ 0.25
TRIM3-207ENST00000528932 RGL2O15211 777 aa16.6■□□□□ 0.25
TRIM3-207ENST00000528932 PNISRQ8TF01 805 aaKnown RBP16.6■□□□□ 0.25
TRIM3-207ENST00000528932 RPGRQ92834 1020 aaKnown RBP16.6■□□□□ 0.25
TRIM3-207ENST00000528932 NYXQ9GZU5 481 aa16.6■□□□□ 0.25
TRIM3-207ENST00000528932 GJA3Q9Y6H8 435 aa16.6■□□□□ 0.25
TRIM3-207ENST00000528932 UBN2Q6ZU65 1347 aa16.6■□□□□ 0.25
TRIM3-207ENST00000528932 CNTNAP1P78357 1384 aa16.6■□□□□ 0.25
TRIM3-207ENST00000528932 COL4A5P29400 1685 aa16.59■□□□□ 0.25
TRIM3-207ENST00000528932 ERVV-1B6SEH8 477 aa16.59■□□□□ 0.25
TRIM3-207ENST00000528932 ITGBL1O95965 494 aaPredicted RBP16.59■□□□□ 0.25
TRIM3-207ENST00000528932 NFE2L2Q16236 605 aa16.59■□□□□ 0.25
TRIM3-207ENST00000528932 SUSD4Q5VX71 490 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms