RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 BMP2KLQ5H9B9 411 aa9.85□□□□□ -0.83
CTNND1-219ENST00000528621 KANK3Q6NY19 840 aa9.85□□□□□ -0.83
CTNND1-219ENST00000528621 KRT28Q7Z3Y7 464 aa9.85□□□□□ -0.83
CTNND1-219ENST00000528621 ARHGAP29Q52LW3 1261 aa9.85□□□□□ -0.83
CTNND1-219ENST00000528621 VPS36Q86VN1 386 aa9.85□□□□□ -0.83
CTNND1-219ENST00000528621 RANBP6O60518 1105 aaKnown RBP9.85□□□□□ -0.83
CTNND1-219ENST00000528621 UQCRFS1P1P0C7P4 283 aa9.85□□□□□ -0.83
CTNND1-219ENST00000528621 FLIIQ13045 1269 aa9.85□□□□□ -0.83
CTNND1-219ENST00000528621 LDHCP07864 332 aa9.85□□□□□ -0.83
CTNND1-219ENST00000528621 CALRP27797 417 aaKnown RBP9.85□□□□□ -0.83
CTNND1-219ENST00000528621 AMPD3Q01432 767 aa9.85□□□□□ -0.83
CTNND1-219ENST00000528621 MAP9Q49MG5 647 aa9.85□□□□□ -0.83
CTNND1-219ENST00000528621 PPP1R42Q7Z4L9 355 aa9.85□□□□□ -0.83
CTNND1-219ENST00000528621 CDC5LQ99459 802 aaKnown RBP9.85□□□□□ -0.83
CTNND1-219ENST00000528621 ZNF518AQ6AHZ1 1483 aa9.85□□□□□ -0.83
CTNND1-219ENST00000528621 SHANK2Q9UPX8 1470 aa9.85□□□□□ -0.83
CTNND1-219ENST00000528621 POTEB2H3BUK9 544 aa9.84□□□□□ -0.83
CTNND1-219ENST00000528621 CAVIN2O95810 425 aa9.84□□□□□ -0.83
CTNND1-219ENST00000528621 KIF5BP33176 963 aa9.84□□□□□ -0.83
CTNND1-219ENST00000528621 NLRP5P59047 1200 aa9.84□□□□□ -0.83
CTNND1-219ENST00000528621 FAM114A1Q8IWE2 563 aa9.84□□□□□ -0.83
CTNND1-219ENST00000528621 ECHDC1Q9NTX5 307 aa9.84□□□□□ -0.83
CTNND1-219ENST00000528621 UVSSAQ2YD98 709 aa9.84□□□□□ -0.83
CTNND1-219ENST00000528621 CENPHQ9H3R5 247 aa9.84□□□□□ -0.83
CTNND1-219ENST00000528621 SSR1P43307 286 aaKnown RBP9.84□□□□□ -0.83
CTNND1-219ENST00000528621 ZSCAN30Q86W11 494 aa9.84□□□□□ -0.83
CTNND1-219ENST00000528621 ZFYVE9O95405 1425 aa9.84□□□□□ -0.83
CTNND1-219ENST00000528621 GSDMDP57764 484 aa9.84□□□□□ -0.83
CTNND1-219ENST00000528621 HDAC1Q13547 482 aaPredicted RBP9.84□□□□□ -0.83
CTNND1-219ENST00000528621 C20orf194Q5TEA3 1177 aa9.84□□□□□ -0.83
CTNND1-219ENST00000528621 CCDC150Q8NCX0 1101 aa9.84□□□□□ -0.83
CTNND1-219ENST00000528621 EXOC5O00471 708 aa9.84□□□□□ -0.83
CTNND1-219ENST00000528621 IFIT3O14879 490 aaKnown RBP9.84□□□□□ -0.83
CTNND1-219ENST00000528621 KIF5CO60282 957 aa9.84□□□□□ -0.83
CTNND1-219ENST00000528621 EZRP15311 586 aaKnown RBP9.84□□□□□ -0.83
CTNND1-219ENST00000528621 TTC22Q5TAA0 569 aa9.84□□□□□ -0.83
CTNND1-219ENST00000528621 FBXO31Q5XUX0 539 aaPredicted RBP9.84□□□□□ -0.83
CTNND1-219ENST00000528621 UNC13AQ9UPW8 1703 aa9.83□□□□□ -0.84
CTNND1-219ENST00000528621 FILIP1Q7Z7B0 1213 aa9.83□□□□□ -0.84
CTNND1-219ENST00000528621 MBIPQ9NS73 344 aa9.83□□□□□ -0.84
CTNND1-219ENST00000528621 TRIM27P14373 513 aa9.83□□□□□ -0.84
CTNND1-219ENST00000528621 SFPQP23246 707 aaKnown RBP eCLIP9.83□□□□□ -0.841e-8■■■□□ 15.1
CTNND1-219ENST00000528621 GJB2P29033 226 aa9.83□□□□□ -0.84
CTNND1-219ENST00000528621 STX1AQ16623 288 aa9.83□□□□□ -0.84
CTNND1-219ENST00000528621 MPNDQ8N594 471 aa9.83□□□□□ -0.84
CTNND1-219ENST00000528621 TAX1BP1Q86VP1 789 aa9.83□□□□□ -0.84
CTNND1-219ENST00000528621 GOLGA6L9A6NEM1 432 aa9.83□□□□□ -0.84
CTNND1-219ENST00000528621 SNRPA1P09661 255 aaKnown RBP9.83□□□□□ -0.84
CTNND1-219ENST00000528621 ANKRD24Q8TF21 1146 aa9.83□□□□□ -0.84
CTNND1-219ENST00000528621 SOS1Q07889 1333 aaPredicted RBP9.83□□□□□ -0.84
CTNND1-219ENST00000528621 A2MP01023 1474 aa9.83□□□□□ -0.84
CTNND1-219ENST00000528621 CCDC194A0A1B0GVG4 234 aa9.82□□□□□ -0.84
CTNND1-219ENST00000528621 TOP1P11387 765 aaKnown RBP9.82□□□□□ -0.84
CTNND1-219ENST00000528621 MCM5P33992 734 aa9.82□□□□□ -0.84
CTNND1-219ENST00000528621 PDE4BQ07343 736 aa9.82□□□□□ -0.84
CTNND1-219ENST00000528621 STXBP4Q6ZWJ1 553 aa9.82□□□□□ -0.84
CTNND1-219ENST00000528621 CACNA2D4Q7Z3S7 1137 aa9.82□□□□□ -0.84
CTNND1-219ENST00000528621 FERMT3Q86UX7 667 aa9.82□□□□□ -0.84
CTNND1-219ENST00000528621 SCLT1Q96NL6 688 aa9.82□□□□□ -0.84
CTNND1-219ENST00000528621 CLIP2Q9UDT6 1046 aa9.82□□□□□ -0.84
CTNND1-219ENST00000528621 KIAA0556O60303 1618 aa9.82□□□□□ -0.84
CTNND1-219ENST00000528621 YEATS4O95619 227 aa9.82□□□□□ -0.84
CTNND1-219ENST00000528621 IDI1Q13907 227 aa9.82□□□□□ -0.84
CTNND1-219ENST00000528621 CNNM3Q8NE01 707 aa9.82□□□□□ -0.84
CTNND1-219ENST00000528621 CCDC102AQ96A19 550 aa9.82□□□□□ -0.84
CTNND1-219ENST00000528621 ZSCAN16Q9H4T2 348 aaPredicted RBP9.82□□□□□ -0.84
CTNND1-219ENST00000528621 PPIP5K1Q6PFW1 1433 aa9.82□□□□□ -0.84
CTNND1-219ENST00000528621 USO1O60763 962 aaKnown RBP9.82□□□□□ -0.84
CTNND1-219ENST00000528621 BAG3O95817 575 aa9.82□□□□□ -0.84
CTNND1-219ENST00000528621 ST5P78524 1137 aa9.82□□□□□ -0.84
CTNND1-219ENST00000528621 C11orf95C9JLR9 678 aaPredicted RBP9.82□□□□□ -0.84
CTNND1-219ENST00000528621 WDHD1O75717 1129 aaPredicted RBP9.82□□□□□ -0.84
CTNND1-219ENST00000528621 ADAMTS2O95450 1211 aa9.82□□□□□ -0.84
CTNND1-219ENST00000528621 ZFYP08048 801 aaPredicted RBP9.82□□□□□ -0.84
CTNND1-219ENST00000528621 USP8P40818 1118 aa9.82□□□□□ -0.84
CTNND1-219ENST00000528621 GUCY1B3Q02153 619 aa9.82□□□□□ -0.84
CTNND1-219ENST00000528621 PTPN14Q15678 1187 aa9.82□□□□□ -0.84
CTNND1-219ENST00000528621 NCOA7Q8NI08 942 aa9.82□□□□□ -0.84
CTNND1-219ENST00000528621 CALML4Q96GE6 196 aa9.82□□□□□ -0.84
CTNND1-219ENST00000528621 ESPNB1AK53 854 aa9.81□□□□□ -0.84
CTNND1-219ENST00000528621 UBA5Q9GZZ9 404 aa9.81□□□□□ -0.84
CTNND1-219ENST00000528621 KAT14Q9H8E8 782 aa9.81□□□□□ -0.84
CTNND1-219ENST00000528621 ACEP12821 1306 aa9.81□□□□□ -0.84
CTNND1-219ENST00000528621 GOLIM4O00461 696 aa9.81□□□□□ -0.84
CTNND1-219ENST00000528621 NUCB1Q02818 461 aa9.81□□□□□ -0.84
CTNND1-219ENST00000528621 SYCP2Q9BX26 1530 aa9.81□□□□□ -0.84
CTNND1-219ENST00000528621 ARHGEF12Q9NZN5 1544 aa9.81□□□□□ -0.84
CTNND1-219ENST00000528621 UHRF1BP1LA0JNW5 1464 aa9.81□□□□□ -0.84
CTNND1-219ENST00000528621 BMP15O95972 392 aa9.81□□□□□ -0.84
CTNND1-219ENST00000528621 ZGPATQ8N5A5 531 aaKnown RBP9.81□□□□□ -0.84
CTNND1-219ENST00000528621 UBXN4Q92575 508 aa9.81□□□□□ -0.84
CTNND1-219ENST00000528621 WDR7Q9Y4E6 1490 aa9.81□□□□□ -0.84
CTNND1-219ENST00000528621 ADAMTS12P58397 1594 aa9.81□□□□□ -0.84
CTNND1-219ENST00000528621 ALDH1L1O75891 902 aa9.81□□□□□ -0.84
CTNND1-219ENST00000528621 TMEM67Q5HYA8 995 aa9.81□□□□□ -0.84
CTNND1-219ENST00000528621 TAF3Q5VWG9 929 aa9.81□□□□□ -0.84
CTNND1-219ENST00000528621 CCDC91Q7Z6B0 441 aa9.81□□□□□ -0.84
CTNND1-219ENST00000528621 NUP88Q99567 741 aaPredicted RBP9.81□□□□□ -0.84
CTNND1-219ENST00000528621 KRT23Q9C075 422 aa9.81□□□□□ -0.84
CTNND1-219ENST00000528621 ZBTB3Q9H5J0 574 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms