RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 OS9Q13438 667 aaPredicted RBP18.09■□□□□ 0.49
ECHDC1-220ENST00000528402 RABEP1Q15276 862 aa18.09■□□□□ 0.49
ECHDC1-220ENST00000528402 GPATCH3Q96I76 525 aa18.09■□□□□ 0.49
ECHDC1-220ENST00000528402 MYD88Q99836 296 aa18.09■□□□□ 0.49
ECHDC1-220ENST00000528402 GLI3P10071 1580 aa18.09■□□□□ 0.49
ECHDC1-220ENST00000528402 G3BP1Q13283 466 aaKnown RBP eCLIP18.08■□□□□ 0.491e-11■■■□□ 15.6
ECHDC1-220ENST00000528402 SUCLG2Q96I99 432 aa18.08■□□□□ 0.49
ECHDC1-220ENST00000528402 THRAP3Q9Y2W1 955 aaKnown RBP18.08■□□□□ 0.49
ECHDC1-220ENST00000528402 KCPQ6ZWJ8 1503 aa18.08■□□□□ 0.48
ECHDC1-220ENST00000528402 DISP2A7MBM2 1401 aa18.08■□□□□ 0.48
ECHDC1-220ENST00000528402 PLCH1Q4KWH8 1693 aa18.08■□□□□ 0.48
ECHDC1-220ENST00000528402 LRP6O75581 1613 aa18.07■□□□□ 0.48
ECHDC1-220ENST00000528402 EXOC5O00471 708 aa18.06■□□□□ 0.48
ECHDC1-220ENST00000528402 KIF2CQ99661 725 aa18.06■□□□□ 0.48
ECHDC1-220ENST00000528402 BCL11AQ9H165 835 aa18.06■□□□□ 0.48
ECHDC1-220ENST00000528402 ARFGEF2Q9Y6D5 1785 aa18.06■□□□□ 0.48
ECHDC1-220ENST00000528402 TRIM6-TRIM34B2RNG4 842 aa18.06■□□□□ 0.48
ECHDC1-220ENST00000528402 GLRX3O76003 335 aaKnown RBP18.06■□□□□ 0.48
ECHDC1-220ENST00000528402 BICC1Q9H694 974 aaKnown RBP18.06■□□□□ 0.48
ECHDC1-220ENST00000528402 ANTXR1Q9H6X2 564 aa18.06■□□□□ 0.48
ECHDC1-220ENST00000528402 IL1RAPL2Q9NP60 686 aa18.06■□□□□ 0.48
ECHDC1-220ENST00000528402 AFDNP55196 1824 aaKnown RBP18.05■□□□□ 0.48
ECHDC1-220ENST00000528402 MCCP23508 829 aa18.05■□□□□ 0.48
ECHDC1-220ENST00000528402 NFKBIBQ15653 356 aa18.05■□□□□ 0.48
ECHDC1-220ENST00000528402 CNTROBQ8N137 903 aa18.05■□□□□ 0.48
ECHDC1-220ENST00000528402 KAZALD1Q96I82 304 aa18.05■□□□□ 0.48
ECHDC1-220ENST00000528402 TOM1O60784 492 aa18.04■□□□□ 0.48
ECHDC1-220ENST00000528402 CHMLP26374 656 aa18.04■□□□□ 0.48
ECHDC1-220ENST00000528402 RABL6Q3YEC7 729 aaPredicted RBP18.04■□□□□ 0.48
ECHDC1-220ENST00000528402 RILPL2Q969X0 211 aa18.04■□□□□ 0.48
ECHDC1-220ENST00000528402 ESYT1Q9BSJ8 1104 aa18.04■□□□□ 0.48
ECHDC1-220ENST00000528402 CHMP5Q9NZZ3 219 aa18.04■□□□□ 0.48
ECHDC1-220ENST00000528402 NBPF26B4DH59 902 aa18.03■□□□□ 0.48
ECHDC1-220ENST00000528402 STARD3NLO95772 234 aa18.03■□□□□ 0.48
ECHDC1-220ENST00000528402 IFIT2P09913 472 aaKnown RBP18.03■□□□□ 0.48
ECHDC1-220ENST00000528402 NBPF14Q5TI25 921 aa18.03■□□□□ 0.48
ECHDC1-220ENST00000528402 NBPF10Q6P3W6 841 aaKnown RBP18.03■□□□□ 0.48
ECHDC1-220ENST00000528402 NUTM1Q86Y26 1132 aa18.03■□□□□ 0.48
ECHDC1-220ENST00000528402 NBPF15Q8N660 670 aa18.03■□□□□ 0.48
ECHDC1-220ENST00000528402 CCDC191Q8NCU4 936 aa18.03■□□□□ 0.48
ECHDC1-220ENST00000528402 COPRSQ9NQ92 184 aa18.03■□□□□ 0.48
ECHDC1-220ENST00000528402 CIZ1Q9ULV3 898 aaPredicted RBP18.03■□□□□ 0.48
ECHDC1-220ENST00000528402 COL16A1Q07092 1604 aaPredicted RBP18.03■□□□□ 0.48
ECHDC1-220ENST00000528402 PHLPP1O60346 1717 aa18.03■□□□□ 0.48
ECHDC1-220ENST00000528402 AK9Q5TCS8 1911 aa18.03■□□□□ 0.48
ECHDC1-220ENST00000528402 H7C1W4 665 aa18.02■□□□□ 0.48
ECHDC1-220ENST00000528402 ANAPC15P60006 121 aa18.02■□□□□ 0.48
ECHDC1-220ENST00000528402 PI4K2BQ8TCG2 481 aa18.02■□□□□ 0.48
ECHDC1-220ENST00000528402 ECHDC1Q9NTX5 307 aa18.02■□□□□ 0.48
ECHDC1-220ENST00000528402 ITGB4P16144 1822 aa18.02■□□□□ 0.47
ECHDC1-220ENST00000528402 TOGARAM1Q9Y4F4 1720 aa18.01■□□□□ 0.47
ECHDC1-220ENST00000528402 A0A087WZG4 1122 aa18.01■□□□□ 0.47
ECHDC1-220ENST00000528402 K7ELQ4 463 aaPredicted RBP18.01■□□□□ 0.47
ECHDC1-220ENST00000528402 PIGBQ92521 554 aa18.01■□□□□ 0.47
ECHDC1-220ENST00000528402 CWC25Q9NXE8 425 aaPredicted RBP18.01■□□□□ 0.47
ECHDC1-220ENST00000528402 WNK3Q9BYP7 1800 aa18.01■□□□□ 0.47
ECHDC1-220ENST00000528402 PTCD1O75127 700 aaKnown RBP18■□□□□ 0.47
ECHDC1-220ENST00000528402 TRIM28Q13263 835 aaKnown RBP18■□□□□ 0.47
ECHDC1-220ENST00000528402 IL17RAQ96F46 866 aa18■□□□□ 0.47
ECHDC1-220ENST00000528402 NUP188Q5SRE5 1749 aa18■□□□□ 0.47
ECHDC1-220ENST00000528402 HIP1O00291 1037 aa17.99■□□□□ 0.47
ECHDC1-220ENST00000528402 ST18O60284 1047 aa17.99■□□□□ 0.47
ECHDC1-220ENST00000528402 A1BGP04217 495 aa17.99■□□□□ 0.47
ECHDC1-220ENST00000528402 RUFY2Q8WXA3 655 aa17.99■□□□□ 0.47
ECHDC1-220ENST00000528402 SLKQ9H2G2 1235 aaPredicted RBP17.99■□□□□ 0.47
ECHDC1-220ENST00000528402 MCM2P49736 904 aa17.98■□□□□ 0.47
ECHDC1-220ENST00000528402 CASP7P55210 303 aa17.98■□□□□ 0.47
ECHDC1-220ENST00000528402 ATG3Q9NT62 314 aa17.98■□□□□ 0.47
ECHDC1-220ENST00000528402 BCL9O00512 1426 aa17.98■□□□□ 0.47
ECHDC1-220ENST00000528402 UBE3BQ7Z3V4 1068 aa17.98■□□□□ 0.47
ECHDC1-220ENST00000528402 EVI5LQ96CN4 794 aa17.98■□□□□ 0.47
ECHDC1-220ENST00000528402 PA2G4Q9UQ80 394 aaKnown RBP17.98■□□□□ 0.47
ECHDC1-220ENST00000528402 NWD2Q9ULI1 1742 aa17.97■□□□□ 0.47
ECHDC1-220ENST00000528402 SASH1O94885 1247 aa17.97■□□□□ 0.47
ECHDC1-220ENST00000528402 RFX5P48382 616 aaPredicted RBP17.97■□□□□ 0.47
ECHDC1-220ENST00000528402 TSHZ3Q63HK5 1081 aa17.97■□□□□ 0.47
ECHDC1-220ENST00000528402 KIF6Q6ZMV9 814 aa17.97■□□□□ 0.47
ECHDC1-220ENST00000528402 AACSQ86V21 672 aa17.97■□□□□ 0.47
ECHDC1-220ENST00000528402 SPATA31A1Q5TZJ5 1347 aa17.96■□□□□ 0.47
ECHDC1-220ENST00000528402 ATP5J2-PTCD1G3V325 749 aa17.96■□□□□ 0.47
ECHDC1-220ENST00000528402 PIP4K2AP48426 406 aaPredicted RBP17.96■□□□□ 0.47
ECHDC1-220ENST00000528402 TCIRG1Q13488 830 aa17.96■□□□□ 0.47
ECHDC1-220ENST00000528402 HSP90AB3PQ58FF7 597 aa17.96■□□□□ 0.47
ECHDC1-220ENST00000528402 TTLL7Q6ZT98 887 aa17.96■□□□□ 0.47
ECHDC1-220ENST00000528402 TICAM2Q86XR7 235 aa17.96■□□□□ 0.47
ECHDC1-220ENST00000528402 ISCA1Q9BUE6 129 aa17.96■□□□□ 0.47
ECHDC1-220ENST00000528402 ASAP1Q9ULH1 1129 aa17.96■□□□□ 0.47
ECHDC1-220ENST00000528402 HSP90AA1P07900 732 aaKnown RBP17.95■□□□□ 0.46
ECHDC1-220ENST00000528402 EPHA10Q5JZY3 1008 aa17.95■□□□□ 0.46
ECHDC1-220ENST00000528402 BARGINQ6ZT62 677 aa17.95■□□□□ 0.46
ECHDC1-220ENST00000528402 FBXO3Q9UK99 471 aa17.95■□□□□ 0.46
ECHDC1-220ENST00000528402 NRAPQ86VF7 1730 aa17.94■□□□□ 0.46
ECHDC1-220ENST00000528402 DDIT3P35638 169 aa17.94■□□□□ 0.46
ECHDC1-220ENST00000528402 PTPN12Q05209 780 aaKnown RBP17.94■□□□□ 0.46
ECHDC1-220ENST00000528402 KIAA1211Q6ZU35 1233 aa17.94■□□□□ 0.46
ECHDC1-220ENST00000528402 UNC5CLQ8IV45 518 aa17.94■□□□□ 0.46
ECHDC1-220ENST00000528402 GPR108Q9NPR9 543 aa17.94■□□□□ 0.46
ECHDC1-220ENST00000528402 SGSM2O43147 1006 aa17.93■□□□□ 0.46
ECHDC1-220ENST00000528402 FOXO4P98177 505 aa17.93■□□□□ 0.46
ECHDC1-220ENST00000528402 DDB1Q16531 1140 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms