RNA–Protein interactions for RNA: ENST00000528324.5

CMTM1-209, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-209ENST00000528324 SMIM5Q71RC9 77 aa17.97■□□□□ 0.47
CMTM1-209ENST00000528324 LRP10Q7Z4F1 713 aa17.97■□□□□ 0.47
CMTM1-209ENST00000528324 PLBD2Q8NHP8 589 aa17.97■□□□□ 0.47
CMTM1-209ENST00000528324 C4AP0C0L4 1744 aa17.97■□□□□ 0.47
CMTM1-209ENST00000528324 CAMTA2O94983 1202 aa17.96■□□□□ 0.47
CMTM1-209ENST00000528324 FKBP5Q13451 457 aaPredicted RBP17.96■□□□□ 0.47
CMTM1-209ENST00000528324 TTLL7Q6ZT98 887 aa17.96■□□□□ 0.47
CMTM1-209ENST00000528324 RIC3Q7Z5B4 369 aa17.96■□□□□ 0.47
CMTM1-209ENST00000528324 PHAXQ9H814 394 aaKnown RBP17.96■□□□□ 0.47
CMTM1-209ENST00000528324 SRP68Q9UHB9 627 aaKnown RBP17.96■□□□□ 0.47
CMTM1-209ENST00000528324 PTPRCP08575 1304 aa17.96■□□□□ 0.46
CMTM1-209ENST00000528324 KIF16BQ96L93 1317 aa17.96■□□□□ 0.46
CMTM1-209ENST00000528324 IPO8O15397 1037 aaKnown RBP17.95■□□□□ 0.46
CMTM1-209ENST00000528324 GYS1P13807 737 aa17.95■□□□□ 0.46
CMTM1-209ENST00000528324 POLD1P28340 1107 aa17.95■□□□□ 0.46
CMTM1-209ENST00000528324 BRPF1P55201 1214 aaPredicted RBP17.95■□□□□ 0.46
CMTM1-209ENST00000528324 MRPL50Q8N5N7 158 aaKnown RBP17.95■□□□□ 0.46
CMTM1-209ENST00000528324 ZBTB3Q9H5J0 574 aa17.95■□□□□ 0.46
CMTM1-209ENST00000528324 CASZ1Q86V15 1759 aa17.94■□□□□ 0.46
CMTM1-209ENST00000528324 KSR2Q6VAB6 950 aa17.94■□□□□ 0.46
CMTM1-209ENST00000528324 GIGYF2Q6Y7W6 1299 aaKnown RBP17.94■□□□□ 0.46
CMTM1-209ENST00000528324 BCL2L13Q9BXK5 485 aa17.94■□□□□ 0.46
CMTM1-209ENST00000528324 ZBTB7AO95365 584 aa17.93■□□□□ 0.46
CMTM1-209ENST00000528324 NEXNQ0ZGT2 675 aa17.93■□□□□ 0.46
CMTM1-209ENST00000528324 SETDB2Q96T68 719 aa17.93■□□□□ 0.46
CMTM1-209ENST00000528324 SPON1Q9HCB6 807 aa17.93■□□□□ 0.46
CMTM1-209ENST00000528324 RCAN3Q9UKA8 241 aa17.93■□□□□ 0.46
CMTM1-209ENST00000528324 SCN7AQ01118 1682 aa17.93■□□□□ 0.46
CMTM1-209ENST00000528324 BCORQ6W2J9 1755 aa17.92■□□□□ 0.46
CMTM1-209ENST00000528324 FKBP8Q14318 412 aa17.92■□□□□ 0.46
CMTM1-209ENST00000528324 PDGFDQ9GZP0 370 aaPredicted RBP17.92■□□□□ 0.46
CMTM1-209ENST00000528324 NUP98P52948 1817 aa17.91■□□□□ 0.46
CMTM1-209ENST00000528324 PI4KAP2A4QPH2 592 aa17.91■□□□□ 0.46
CMTM1-209ENST00000528324 MSL1Q68DK7 614 aa17.91■□□□□ 0.46
CMTM1-209ENST00000528324 G2E3Q7L622 706 aa17.91■□□□□ 0.46
CMTM1-209ENST00000528324 PI4KAP1Q8N8J0 262 aa17.91■□□□□ 0.46
CMTM1-209ENST00000528324 ARHGAP45Q92619 1136 aa17.91■□□□□ 0.46
CMTM1-209ENST00000528324 API5Q9BZZ5 524 aaKnown RBP17.91■□□□□ 0.46
CMTM1-209ENST00000528324 PARP3Q9Y6F1 533 aa17.91■□□□□ 0.46
CMTM1-209ENST00000528324 TCIRG1Q13488 830 aa17.9■□□□□ 0.46
CMTM1-209ENST00000528324 HLFQ16534 295 aa17.9■□□□□ 0.46
CMTM1-209ENST00000528324 PARP10Q53GL7 1025 aa17.9■□□□□ 0.46
CMTM1-209ENST00000528324 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.9■□□□□ 0.46
CMTM1-209ENST00000528324 DNAAF4Q8WXU2 420 aa17.9■□□□□ 0.46
CMTM1-209ENST00000528324 BCL2L12Q9HB09 334 aa17.9■□□□□ 0.46
CMTM1-209ENST00000528324 NIP7Q9Y221 180 aaKnown RBP eCLIP17.9■□□□□ 0.46
CMTM1-209ENST00000528324 ATF5Q9Y2D1 282 aaPredicted RBP17.9■□□□□ 0.46
CMTM1-209ENST00000528324 MAP3K2Q9Y2U5 619 aa17.9■□□□□ 0.46
CMTM1-209ENST00000528324 ATP10DQ9P241 1426 aa17.89■□□□□ 0.46
CMTM1-209ENST00000528324 NPHP1O15259 732 aa17.89■□□□□ 0.45
CMTM1-209ENST00000528324 MMP10P09238 476 aa17.89■□□□□ 0.45
CMTM1-209ENST00000528324 BICDL1Q6ZP65 573 aa17.89■□□□□ 0.45
CMTM1-209ENST00000528324 FRAT1Q92837 279 aaPredicted RBP17.89■□□□□ 0.45
CMTM1-209ENST00000528324 METTL22Q9BUU2 404 aaPredicted RBP17.89■□□□□ 0.45
CMTM1-209ENST00000528324 NOB1Q9ULX3 412 aaKnown RBP17.89■□□□□ 0.45
CMTM1-209ENST00000528324 CARMIL3Q8ND23 1372 aa17.89■□□□□ 0.45
CMTM1-209ENST00000528324 BCAR3O75815 825 aa17.88■□□□□ 0.45
CMTM1-209ENST00000528324 MS4A1P11836 297 aa17.88■□□□□ 0.45
CMTM1-209ENST00000528324 NFIXQ14938 502 aa17.88■□□□□ 0.45
CMTM1-209ENST00000528324 TBC1D9BQ66K14 1250 aa17.88■□□□□ 0.45
CMTM1-209ENST00000528324 PPP1R42Q7Z4L9 355 aa17.88■□□□□ 0.45
CMTM1-209ENST00000528324 NYXQ9GZU5 481 aa17.88■□□□□ 0.45
CMTM1-209ENST00000528324 ARFGEF2Q9Y6D5 1785 aa17.87■□□□□ 0.45
CMTM1-209ENST00000528324 TM4SF1P30408 202 aa17.87■□□□□ 0.45
CMTM1-209ENST00000528324 ZKSCAN2Q63HK3 967 aa17.87■□□□□ 0.45
CMTM1-209ENST00000528324 MYD88Q99836 296 aa17.87■□□□□ 0.45
CMTM1-209ENST00000528324 GPTP24298 496 aa17.86■□□□□ 0.45
CMTM1-209ENST00000528324 GTF2E1P29083 439 aaPredicted RBP17.86■□□□□ 0.45
CMTM1-209ENST00000528324 TRIM28Q13263 835 aaKnown RBP17.86■□□□□ 0.45
CMTM1-209ENST00000528324 TPTE2Q6XPS3 522 aa17.86■□□□□ 0.45
CMTM1-209ENST00000528324 NBPF5PQ86XG9 351 aaPredicted RBP17.86■□□□□ 0.45
CMTM1-209ENST00000528324 ZNF34Q8IZ26 560 aa17.86■□□□□ 0.45
CMTM1-209ENST00000528324 ADCY9O60503 1353 aa17.86■□□□□ 0.45
CMTM1-209ENST00000528324 HSP90B1P14625 803 aaKnown RBP17.85■□□□□ 0.45
CMTM1-209ENST00000528324 ANKRD36CQ5JPF3 1778 aa17.85■□□□□ 0.45
CMTM1-209ENST00000528324 RNF123Q5XPI4 1314 aa17.85■□□□□ 0.45
CMTM1-209ENST00000528324 SLC4A10Q6U841 1118 aa17.85■□□□□ 0.45
CMTM1-209ENST00000528324 ATF7IPQ6VMQ6 1270 aa17.85■□□□□ 0.45
CMTM1-209ENST00000528324 CCDC191Q8NCU4 936 aa17.85■□□□□ 0.45
CMTM1-209ENST00000528324 LINS1Q8NG48 757 aa17.85■□□□□ 0.45
CMTM1-209ENST00000528324 PPP1R1BQ9UD71 204 aaPredicted RBP17.85■□□□□ 0.45
CMTM1-209ENST00000528324 POLRMTO00411 1230 aaKnown RBP17.84■□□□□ 0.45
CMTM1-209ENST00000528324 SERPINB2P05120 415 aa17.84■□□□□ 0.45
CMTM1-209ENST00000528324 CNBD1Q8NA66 436 aa17.84■□□□□ 0.45
CMTM1-209ENST00000528324 ISCA1Q9BUE6 129 aa17.84■□□□□ 0.45
CMTM1-209ENST00000528324 UTP14AQ9BVJ6 771 aaKnown RBP17.84■□□□□ 0.45
CMTM1-209ENST00000528324 CWC25Q9NXE8 425 aaPredicted RBP17.84■□□□□ 0.45
CMTM1-209ENST00000528324 COL24A1Q17RW2 1714 aa17.84■□□□□ 0.45
CMTM1-209ENST00000528324 IBTKQ9P2D0 1353 aaPredicted RBP17.83■□□□□ 0.45
CMTM1-209ENST00000528324 F6X3S4 739 aa17.83■□□□□ 0.44
CMTM1-209ENST00000528324 ATP5J2-PTCD1G3V325 749 aa17.83■□□□□ 0.44
CMTM1-209ENST00000528324 CCT4P50991 539 aaKnown RBP17.83■□□□□ 0.44
CMTM1-209ENST00000528324 ST5P78524 1137 aa17.83■□□□□ 0.44
CMTM1-209ENST00000528324 NLRP10Q86W26 655 aa17.83■□□□□ 0.44
CMTM1-209ENST00000528324 FTSJ3Q8IY81 847 aaKnown RBP17.83■□□□□ 0.44
CMTM1-209ENST00000528324 SRCIN1Q9C0H9 1055 aa17.83■□□□□ 0.44
CMTM1-209ENST00000528324 ALDH1L1O75891 902 aa17.82■□□□□ 0.44
CMTM1-209ENST00000528324 PTGER2P43116 358 aa17.82■□□□□ 0.44
CMTM1-209ENST00000528324 DDR1Q08345 913 aa17.82■□□□□ 0.44
CMTM1-209ENST00000528324 TRMT112Q9UI30 125 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms