RNA–Protein interactions for RNA: ENST00000528267.1

SCN3B-205, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-205ENST00000528267 TM4SF1P30408 202 aa16.65■□□□□ 0.26
SCN3B-205ENST00000528267 TBC1D9BQ66K14 1250 aa16.65■□□□□ 0.26
SCN3B-205ENST00000528267 XAGE3Q8WTP9 111 aa16.65■□□□□ 0.26
SCN3B-205ENST00000528267 PHAXQ9H814 394 aaKnown RBP16.65■□□□□ 0.26
SCN3B-205ENST00000528267 CACNA1FO60840 1977 aa16.65■□□□□ 0.26
SCN3B-205ENST00000528267 ZBED9Q6R2W3 1325 aa16.65■□□□□ 0.26
SCN3B-205ENST00000528267 ZPR1O75312 459 aa16.64■□□□□ 0.25
SCN3B-205ENST00000528267 NFIXQ14938 502 aa16.64■□□□□ 0.25
SCN3B-205ENST00000528267 ANKRD31Q8N7Z5 1873 aa16.64■□□□□ 0.25
SCN3B-205ENST00000528267 POLRMTO00411 1230 aaKnown RBP16.63■□□□□ 0.25
SCN3B-205ENST00000528267 COPS6Q7L5N1 327 aa16.63■□□□□ 0.25
SCN3B-205ENST00000528267 G2E3Q7L622 706 aa16.63■□□□□ 0.25
SCN3B-205ENST00000528267 DBF4Q9UBU7 674 aaPredicted RBP16.63■□□□□ 0.25
SCN3B-205ENST00000528267 MAP3K15Q6ZN16 1313 aa16.63■□□□□ 0.25
SCN3B-205ENST00000528267 AIMP1Q12904 312 aaKnown RBP16.62■□□□□ 0.25
SCN3B-205ENST00000528267 NLGN1Q8N2Q7 840 aa16.62■□□□□ 0.25
SCN3B-205ENST00000528267 ZBTB3Q9H5J0 574 aa16.62■□□□□ 0.25
SCN3B-205ENST00000528267 CARMIL3Q8ND23 1372 aa16.62■□□□□ 0.25
SCN3B-205ENST00000528267 ARXQ96QS3 562 aa16.61■□□□□ 0.25
SCN3B-205ENST00000528267 N4BP2Q86UW6 1770 aaPredicted RBP16.61■□□□□ 0.25
SCN3B-205ENST00000528267 C10orf71Q711Q0 1435 aa16.61■□□□□ 0.25
SCN3B-205ENST00000528267 ATP10DQ9P241 1426 aa16.61■□□□□ 0.25
SCN3B-205ENST00000528267 TNRC6CQ9HCJ0 1690 aaKnown RBP16.6■□□□□ 0.25
SCN3B-205ENST00000528267 CCDC30Q5VVM6 783 aa16.6■□□□□ 0.25
SCN3B-205ENST00000528267 BICDL1Q6ZP65 573 aa16.6■□□□□ 0.25
SCN3B-205ENST00000528267 UBN2Q6ZU65 1347 aa16.6■□□□□ 0.25
SCN3B-205ENST00000528267 COL11A2P13942 1736 aaPredicted RBP16.59■□□□□ 0.25
SCN3B-205ENST00000528267 ERVV-1B6SEH8 477 aa16.59■□□□□ 0.25
SCN3B-205ENST00000528267 POLD1P28340 1107 aa16.59■□□□□ 0.25
SCN3B-205ENST00000528267 FHDC1Q9C0D6 1143 aaPredicted RBP16.59■□□□□ 0.25
SCN3B-205ENST00000528267 ADCY9O60503 1353 aa16.59■□□□□ 0.25
SCN3B-205ENST00000528267 BRCA1P38398 1863 aaKnown RBP16.59■□□□□ 0.25
SCN3B-205ENST00000528267 GIGYF2Q6Y7W6 1299 aaKnown RBP16.58■□□□□ 0.24
SCN3B-205ENST00000528267 KIF6Q6ZMV9 814 aa16.58■□□□□ 0.24
SCN3B-205ENST00000528267 HYPKQ9NX55 129 aa16.58■□□□□ 0.24
SCN3B-205ENST00000528267 CLEC4GQ6UXB4 293 aa16.57■□□□□ 0.24
SCN3B-205ENST00000528267 NLGN2Q8NFZ4 835 aa16.57■□□□□ 0.24
SCN3B-205ENST00000528267 GOLGB1Q14789 3259 aaKnown RBP16.57■□□□□ 0.24
SCN3B-205ENST00000528267 DLEC1Q9Y238 1755 aa16.56■□□□□ 0.24
SCN3B-205ENST00000528267 RGL2O15211 777 aa16.56■□□□□ 0.24
SCN3B-205ENST00000528267 SLC4A2P04920 1241 aa16.56■□□□□ 0.24
SCN3B-205ENST00000528267 SERPINB2P05120 415 aa16.56■□□□□ 0.24
SCN3B-205ENST00000528267 NPM2Q86SE8 214 aaKnown RBP16.56■□□□□ 0.24
SCN3B-205ENST00000528267 ZNF34Q8IZ26 560 aa16.56■□□□□ 0.24
SCN3B-205ENST00000528267 CCDC24Q8N4L8 307 aa16.56■□□□□ 0.24
SCN3B-205ENST00000528267 SSH1Q8WYL5 1049 aa16.56■□□□□ 0.24
SCN3B-205ENST00000528267 PXDNLA1KZ92 1463 aa16.55■□□□□ 0.24
SCN3B-205ENST00000528267 GPTP24298 496 aa16.55■□□□□ 0.24
SCN3B-205ENST00000528267 MRPL50Q8N5N7 158 aaKnown RBP16.55■□□□□ 0.24
SCN3B-205ENST00000528267 PLBD2Q8NHP8 589 aa16.55■□□□□ 0.24
SCN3B-205ENST00000528267 ZNF428Q96B54 188 aa16.55■□□□□ 0.24
SCN3B-205ENST00000528267 SYT17Q9BSW7 474 aa16.55■□□□□ 0.24
SCN3B-205ENST00000528267 BCL2L13Q9BXK5 485 aa16.55■□□□□ 0.24
SCN3B-205ENST00000528267 PPP1R1BQ9UD71 204 aaPredicted RBP16.55■□□□□ 0.24
SCN3B-205ENST00000528267 NIP7Q9Y221 180 aaKnown RBP eCLIP16.55■□□□□ 0.24
SCN3B-205ENST00000528267 LAMB2P55268 1798 aa16.54■□□□□ 0.24
SCN3B-205ENST00000528267 ABCC12Q96J65 1359 aa16.54■□□□□ 0.24
SCN3B-205ENST00000528267 DDX60Q8IY21 1712 aaKnown RBP16.54■□□□□ 0.24
SCN3B-205ENST00000528267 FLIIQ13045 1269 aa16.54■□□□□ 0.24
SCN3B-205ENST00000528267 PRR5LQ6MZQ0 368 aa16.54■□□□□ 0.24
SCN3B-205ENST00000528267 ANKRD13DQ6ZTN6 518 aa16.54■□□□□ 0.24
SCN3B-205ENST00000528267 STK31Q9BXU1 1019 aa16.54■□□□□ 0.24
SCN3B-205ENST00000528267 ZNF652Q9Y2D9 606 aa16.54■□□□□ 0.24
SCN3B-205ENST00000528267 PARP3Q9Y6F1 533 aa16.54■□□□□ 0.24
SCN3B-205ENST00000528267 SUSD4Q5VX71 490 aa16.53■□□□□ 0.24
SCN3B-205ENST00000528267 KLHL34Q8N239 644 aa16.53■□□□□ 0.24
SCN3B-205ENST00000528267 UTRNP46939 3433 aa16.52■□□□□ 0.24
SCN3B-205ENST00000528267 FAM177BA6PVY3 158 aa16.52■□□□□ 0.24
SCN3B-205ENST00000528267 TCIRG1Q13488 830 aa16.52■□□□□ 0.24
SCN3B-205ENST00000528267 SETDB2Q96T68 719 aa16.52■□□□□ 0.24
SCN3B-205ENST00000528267 ISCA1Q9BUE6 129 aa16.52■□□□□ 0.24
SCN3B-205ENST00000528267 PI4KAP2A4QPH2 592 aa16.51■□□□□ 0.23
SCN3B-205ENST00000528267 ATP5J2-PTCD1G3V325 749 aa16.51■□□□□ 0.23
SCN3B-205ENST00000528267 NTSR2O95665 410 aa16.51■□□□□ 0.23
SCN3B-205ENST00000528267 NLRP10Q86W26 655 aa16.51■□□□□ 0.23
SCN3B-205ENST00000528267 PI4KAP1Q8N8J0 262 aa16.51■□□□□ 0.23
SCN3B-205ENST00000528267 YTHDC1Q96MU7 727 aaKnown RBP16.51■□□□□ 0.23
SCN3B-205ENST00000528267 MAP3K2Q9Y2U5 619 aa16.51■□□□□ 0.23
SCN3B-205ENST00000528267 IBTKQ9P2D0 1353 aaPredicted RBP16.51■□□□□ 0.23
SCN3B-205ENST00000528267 CACNA1SQ13698 1873 aa16.5■□□□□ 0.23
SCN3B-205ENST00000528267 F6X3S4 739 aa16.5■□□□□ 0.23
SCN3B-205ENST00000528267 IGKV5-2P06315 115 aa16.5■□□□□ 0.23
SCN3B-205ENST00000528267 RARSP54136 660 aaKnown RBP16.5■□□□□ 0.23
SCN3B-205ENST00000528267 KSR2Q6VAB6 950 aa16.5■□□□□ 0.23
SCN3B-205ENST00000528267 RIC3Q7Z5B4 369 aa16.5■□□□□ 0.23
SCN3B-205ENST00000528267 NUTM1Q86Y26 1132 aa16.5■□□□□ 0.23
SCN3B-205ENST00000528267 SYNE4Q8N205 404 aa16.5■□□□□ 0.23
SCN3B-205ENST00000528267 MYD88Q99836 296 aa16.5■□□□□ 0.23
SCN3B-205ENST00000528267 CD2APQ9Y5K6 639 aa16.5■□□□□ 0.23
SCN3B-205ENST00000528267 CT47B1P0C2W7 299 aaPredicted RBP16.49■□□□□ 0.23
SCN3B-205ENST00000528267 KCNA3P22001 575 aa16.49■□□□□ 0.23
SCN3B-205ENST00000528267 ALDH1L2Q3SY69 923 aa16.49■□□□□ 0.23
SCN3B-205ENST00000528267 METTL22Q9BUU2 404 aaPredicted RBP16.49■□□□□ 0.23
SCN3B-205ENST00000528267 COL4A1P02462 1669 aa16.49■□□□□ 0.23
SCN3B-205ENST00000528267 CHRNA5P30532 468 aa16.48■□□□□ 0.23
SCN3B-205ENST00000528267 FKBP5Q13451 457 aaPredicted RBP16.48■□□□□ 0.23
SCN3B-205ENST00000528267 ERFEQ4G0M1 354 aa16.48■□□□□ 0.23
SCN3B-205ENST00000528267 NBPF5PQ86XG9 351 aaPredicted RBP16.48■□□□□ 0.23
SCN3B-205ENST00000528267 CNBD1Q8NA66 436 aa16.48■□□□□ 0.23
SCN3B-205ENST00000528267 CHMP4AQ9BY43 222 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms