RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 MIS18AQ9NYP9 233 aa34.31■■■■□ 3.08
TRIM3-206ENST00000528227 CCDC88AQ3V6T2 1871 aa34.31■■■■□ 3.08
TRIM3-206ENST00000528227 KDM3BQ7LBC6 1761 aa34.3■■■■□ 3.08
TRIM3-206ENST00000528227 ZNF652Q9Y2D9 606 aa34.29■■■■□ 3.08
TRIM3-206ENST00000528227 C21orf2O43822 256 aa34.27■■■■□ 3.08
TRIM3-206ENST00000528227 FER1L6Q2WGJ9 1857 aa34.27■■■■□ 3.08
TRIM3-206ENST00000528227 RGL2O15211 777 aa34.26■■■■□ 3.08
TRIM3-206ENST00000528227 NFE2L2Q16236 605 aa34.26■■■■□ 3.08
TRIM3-206ENST00000528227 PNISRQ8TF01 805 aaKnown RBP34.26■■■■□ 3.08
TRIM3-206ENST00000528227 ZNF219Q9P2Y4 722 aaPredicted RBP34.26■■■■□ 3.08
TRIM3-206ENST00000528227 GLTPD2A6NH11 291 aa34.25■■■■□ 3.07
TRIM3-206ENST00000528227 SRGNP10124 158 aa34.25■■■■□ 3.07
TRIM3-206ENST00000528227 STYK1Q6J9G0 422 aa34.25■■■■□ 3.07
TRIM3-206ENST00000528227 NBPF5PQ86XG9 351 aaPredicted RBP34.25■■■■□ 3.07
TRIM3-206ENST00000528227 ARFGEF2Q9Y6D5 1785 aa34.24■■■■□ 3.07
TRIM3-206ENST00000528227 FSTL1Q12841 308 aa34.24■■■■□ 3.07
TRIM3-206ENST00000528227 CNKSR1Q969H4 720 aa34.24■■■■□ 3.07
TRIM3-206ENST00000528227 CACNA1SQ13698 1873 aa34.24■■■■□ 3.07
TRIM3-206ENST00000528227 SLX4Q8IY92 1834 aa34.23■■■■□ 3.07
TRIM3-206ENST00000528227 MASTLQ96GX5 879 aa34.22■■■■□ 3.07
TRIM3-206ENST00000528227 PNNQ9H307 717 aaKnown RBP34.22■■■■□ 3.07
TRIM3-206ENST00000528227 WDR90Q96KV7 1748 aa34.21■■■■□ 3.07
TRIM3-206ENST00000528227 THUMPD2Q9BTF0 503 aaKnown RBP34.21■■■■□ 3.07
TRIM3-206ENST00000528227 NIP7Q9Y221 180 aaKnown RBP eCLIP34.21■■■■□ 3.07
TRIM3-206ENST00000528227 PRPF40BQ6NWY9 871 aaKnown RBP34.2■■■■□ 3.07
TRIM3-206ENST00000528227 MAPK8IP3Q9UPT6 1336 aa34.2■■■■□ 3.07
TRIM3-206ENST00000528227 DICER1Q9UPY3 1922 aaKnown RBP34.2■■■■□ 3.06
TRIM3-206ENST00000528227 EIF4A1P60842 406 aaKnown RBP34.19■■■■□ 3.06
TRIM3-206ENST00000528227 DNAJC5GQ8N7S2 189 aa34.19■■■■□ 3.06
TRIM3-206ENST00000528227 LTBP3Q9NS15 1303 aa34.19■■■■□ 3.06
TRIM3-206ENST00000528227 HLFQ16534 295 aa34.18■■■■□ 3.06
TRIM3-206ENST00000528227 TPTE2Q6XPS3 522 aa34.17■■■■□ 3.06
TRIM3-206ENST00000528227 TAOK3Q9H2K8 898 aa34.17■■■■□ 3.06
TRIM3-206ENST00000528227 KLRG2A4D1S0 409 aaPredicted RBP34.16■■■■□ 3.06
TRIM3-206ENST00000528227 VEGFAP15692 232 aaPredicted RBP34.16■■■■□ 3.06
TRIM3-206ENST00000528227 RALBP1Q15311 655 aa34.16■■■■□ 3.06
TRIM3-206ENST00000528227 ERFEQ4G0M1 354 aa34.15■■■■□ 3.06
TRIM3-206ENST00000528227 SOGA3Q5TF21 947 aa34.15■■■■□ 3.06
TRIM3-206ENST00000528227 SMC1BQ8NDV3 1235 aa34.15■■■■□ 3.06
TRIM3-206ENST00000528227 NPR1P16066 1061 aa34.13■■■■□ 3.05
TRIM3-206ENST00000528227 FAM177BA6PVY3 158 aa34.12■■■■□ 3.05
TRIM3-206ENST00000528227 DPY19L2Q6NUT2 758 aa34.12■■■■□ 3.05
TRIM3-206ENST00000528227 NGEFQ8N5V2 710 aa34.12■■■■□ 3.05
TRIM3-206ENST00000528227 C7orf43Q8WVR3 580 aa34.12■■■■□ 3.05
TRIM3-206ENST00000528227 ERVV-1B6SEH8 477 aa34.11■■■■□ 3.05
TRIM3-206ENST00000528227 NUP98P52948 1817 aa34.1■■■■□ 3.05
TRIM3-206ENST00000528227 POTECB2RU33 542 aa34.1■■■■□ 3.05
TRIM3-206ENST00000528227 RRP7AQ9Y3A4 280 aaKnown RBP34.1■■■■□ 3.05
TRIM3-206ENST00000528227 MAP3K15Q6ZN16 1313 aa34.09■■■■□ 3.05
TRIM3-206ENST00000528227 HTRA3P83110 453 aa34.09■■■■□ 3.05
TRIM3-206ENST00000528227 TTLL7Q6ZT98 887 aa34.08■■■■□ 3.05
TRIM3-206ENST00000528227 MYL6BP14649 208 aa34.07■■■■□ 3.04
TRIM3-206ENST00000528227 CCDC93Q567U6 631 aa34.07■■■■□ 3.04
TRIM3-206ENST00000528227 KIF6Q6ZMV9 814 aa34.07■■■■□ 3.04
TRIM3-206ENST00000528227 RIPK4P57078 832 aa34.06■■■■□ 3.04
TRIM3-206ENST00000528227 GTF2E1P29083 439 aaPredicted RBP34.05■■■■□ 3.04
TRIM3-206ENST00000528227 NYXQ9GZU5 481 aa34.05■■■■□ 3.04
TRIM3-206ENST00000528227 TSPYL4Q9UJ04 414 aa34.05■■■■□ 3.04
TRIM3-206ENST00000528227 ERBB4Q15303 1308 aa34.04■■■■□ 3.04
TRIM3-206ENST00000528227 ABCC12Q96J65 1359 aa34.03■■■■□ 3.04
TRIM3-206ENST00000528227 DDX10Q13206 875 aaKnown RBP34.03■■■■□ 3.04
TRIM3-206ENST00000528227 IFFO2Q5TF58 517 aa34.02■■■■□ 3.04
TRIM3-206ENST00000528227 NUTM1Q86Y26 1132 aa34.02■■■■□ 3.04
TRIM3-206ENST00000528227 KLRG1Q96E93 195 aa34.02■■■■□ 3.04
TRIM3-206ENST00000528227 ZBTB3Q9H5J0 574 aa34.02■■■■□ 3.04
TRIM3-206ENST00000528227 MYBBP1AQ9BQG0 1328 aaKnown RBP34.02■■■■□ 3.04
TRIM3-206ENST00000528227 ALDH1B1P30837 517 aa34.01■■■■□ 3.03
TRIM3-206ENST00000528227 TMPOP42166 694 aaKnown RBP34.01■■■■□ 3.03
TRIM3-206ENST00000528227 UBN2Q6ZU65 1347 aa34.01■■■■□ 3.03
TRIM3-206ENST00000528227 IBTKQ9P2D0 1353 aaPredicted RBP34■■■■□ 3.03
TRIM3-206ENST00000528227 FKBP4Q02790 459 aaKnown RBP eCLIP34■■■■□ 3.03
TRIM3-206ENST00000528227 CRY2Q49AN0 593 aa34■■■■□ 3.03
TRIM3-206ENST00000528227 OLFM4Q6UX06 510 aa34■■■■□ 3.03
TRIM3-206ENST00000528227 BABAM1Q9NWV8 329 aa34■■■■□ 3.03
TRIM3-206ENST00000528227 DDNO94850 711 aaPredicted RBP33.99■■■■□ 3.03
TRIM3-206ENST00000528227 LMOD3Q0VAK6 560 aa33.99■■■■□ 3.03
TRIM3-206ENST00000528227 RIC1Q4ADV7 1423 aa33.98■■■■□ 3.03
TRIM3-206ENST00000528227 GPTP24298 496 aa33.98■■■■□ 3.03
TRIM3-206ENST00000528227 LRP10Q7Z4F1 713 aa33.97■■■■□ 3.03
TRIM3-206ENST00000528227 ZNF34Q8IZ26 560 aa33.97■■■■□ 3.03
TRIM3-206ENST00000528227 RTKN2Q8IZC4 609 aa33.97■■■■□ 3.03
TRIM3-206ENST00000528227 PDIA6Q15084 440 aa33.96■■■■□ 3.03
TRIM3-206ENST00000528227 SUSD4Q5VX71 490 aa33.96■■■■□ 3.03
TRIM3-206ENST00000528227 GIGYF2Q6Y7W6 1299 aaKnown RBP33.96■■■■□ 3.03
TRIM3-206ENST00000528227 ZNF277Q9NRM2 450 aaPredicted RBP33.96■■■■□ 3.03
TRIM3-206ENST00000528227 JMYQ8N9B5 988 aa33.95■■■■□ 3.03
TRIM3-206ENST00000528227 EIF2S2P20042 333 aaKnown RBP33.94■■■■□ 3.02
TRIM3-206ENST00000528227 CCDC146Q8IYE0 955 aa33.93■■■■□ 3.02
TRIM3-206ENST00000528227 SNED1Q8TER0 1413 aa33.93■■■■□ 3.02
TRIM3-206ENST00000528227 NTSR2O95665 410 aa33.92■■■■□ 3.02
TRIM3-206ENST00000528227 HOXA10P31260 410 aaPredicted RBP33.91■■■■□ 3.02
TRIM3-206ENST00000528227 PROSER3Q2NL68 480 aa33.91■■■■□ 3.02
TRIM3-206ENST00000528227 L3MBTL3Q96JM7 780 aaPredicted RBP33.91■■■■□ 3.02
TRIM3-206ENST00000528227 RPGRQ92834 1020 aaKnown RBP33.9■■■■□ 3.02
TRIM3-206ENST00000528227 ZNF541Q9H0D2 1346 aa33.89■■■■□ 3.02
TRIM3-206ENST00000528227 SCN4AP35499 1836 aa33.89■■■■□ 3.02
TRIM3-206ENST00000528227 ANXA1P04083 346 aa33.89■■■■□ 3.02
TRIM3-206ENST00000528227 NEUROD2Q15784 382 aa33.89■■■■□ 3.02
TRIM3-206ENST00000528227 PARP10Q53GL7 1025 aa33.89■■■■□ 3.02
TRIM3-206ENST00000528227 SYNE4Q8N205 404 aa33.89■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms