RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 LMAN1P49257 510 aa14.69□□□□□ -0.06
TSKU-203ENST00000527881 ST5P78524 1137 aa14.69□□□□□ -0.06
TSKU-203ENST00000527881 ZRSR1Q15695 479 aaKnown RBP14.69□□□□□ -0.06
TSKU-203ENST00000527881 SCAND2PQ9GZW5 306 aaPredicted RBP14.69□□□□□ -0.06
TSKU-203ENST00000527881 POLKQ9UBT6 870 aa14.69□□□□□ -0.06
TSKU-203ENST00000527881 SEC31AO94979 1220 aaKnown RBP14.69□□□□□ -0.06
TSKU-203ENST00000527881 NECTIN2Q92692 538 aa14.69□□□□□ -0.06
TSKU-203ENST00000527881 MIS18AQ9NYP9 233 aa14.69□□□□□ -0.06
TSKU-203ENST00000527881 GYS2P54840 703 aa14.69□□□□□ -0.06
TSKU-203ENST00000527881 PRPF40BQ6NWY9 871 aaKnown RBP14.69□□□□□ -0.06
TSKU-203ENST00000527881 NYAP1Q6ZVC0 841 aa14.69□□□□□ -0.06
TSKU-203ENST00000527881 LRRN4CLQ8ND94 238 aa14.69□□□□□ -0.06
TSKU-203ENST00000527881 RGS22Q8NE09 1264 aa14.69□□□□□ -0.06
TSKU-203ENST00000527881 CLSTN2Q9H4D0 955 aa14.69□□□□□ -0.06
TSKU-203ENST00000527881 CABP1Q9NZU7 370 aa14.69□□□□□ -0.06
TSKU-203ENST00000527881 A0A087WWV3 80 aa14.68□□□□□ -0.06
TSKU-203ENST00000527881 MYO1CO00159 1063 aa14.68□□□□□ -0.06
TSKU-203ENST00000527881 PLA2G4AP47712 749 aa14.68□□□□□ -0.06
TSKU-203ENST00000527881 MCM10Q7L590 875 aa14.68□□□□□ -0.06
TSKU-203ENST00000527881 AK7Q96M32 723 aa14.68□□□□□ -0.06
TSKU-203ENST00000527881 EFCC1Q9HA90 598 aa14.68□□□□□ -0.06
TSKU-203ENST00000527881 ARHGEF40Q8TER5 1519 aa14.68□□□□□ -0.06
TSKU-203ENST00000527881 STK3Q13188 491 aa14.68□□□□□ -0.06
TSKU-203ENST00000527881 FAM177A1Q8N128 213 aaPredicted RBP14.68□□□□□ -0.06
TSKU-203ENST00000527881 SMARCE1Q969G3 411 aa14.68□□□□□ -0.06
TSKU-203ENST00000527881 SSH2Q76I76 1423 aa14.68□□□□□ -0.06
TSKU-203ENST00000527881 LRRC7Q96NW7 1537 aa14.68□□□□□ -0.06
TSKU-203ENST00000527881 URI1O94763 535 aaPredicted RBP14.68□□□□□ -0.06
TSKU-203ENST00000527881 OAS2P29728 719 aaKnown RBP14.68□□□□□ -0.06
TSKU-203ENST00000527881 NPHP3Q7Z494 1330 aa14.67□□□□□ -0.06
TSKU-203ENST00000527881 PNMA6EA0A0J9YXQ4 647 aa14.67□□□□□ -0.06
TSKU-203ENST00000527881 SMC2O95347 1197 aa14.67□□□□□ -0.06
TSKU-203ENST00000527881 DNAI1Q9UI46 699 aa14.67□□□□□ -0.06
TSKU-203ENST00000527881 KIAA1210Q9ULL0 1709 aa14.67□□□□□ -0.06
TSKU-203ENST00000527881 PDCP20941 246 aa14.67□□□□□ -0.06
TSKU-203ENST00000527881 FOSBP53539 338 aa14.67□□□□□ -0.06
TSKU-203ENST00000527881 GGT6Q6P531 493 aa14.67□□□□□ -0.06
TSKU-203ENST00000527881 ZSCAN31Q96LW9 406 aaPredicted RBP14.67□□□□□ -0.06
TSKU-203ENST00000527881 TTC14Q96N46 770 aa14.67□□□□□ -0.06
TSKU-203ENST00000527881 FMNL2Q96PY5 1086 aa14.67□□□□□ -0.06
TSKU-203ENST00000527881 PTPRCP08575 1304 aa14.67□□□□□ -0.06
TSKU-203ENST00000527881 CCT4P50991 539 aaKnown RBP14.67□□□□□ -0.06
TSKU-203ENST00000527881 TCEANC2Q96MN5 208 aa14.67□□□□□ -0.06
TSKU-203ENST00000527881 SH2B1Q9NRF2 756 aaPredicted RBP14.67□□□□□ -0.06
TSKU-203ENST00000527881 KNDC1Q76NI1 1749 aa14.66□□□□□ -0.06
TSKU-203ENST00000527881 H2AFXP16104 143 aaPredicted RBP14.66□□□□□ -0.06
TSKU-203ENST00000527881 G2E3Q7L622 706 aa14.66□□□□□ -0.06
TSKU-203ENST00000527881 GPATCH11Q8N954 259 aa14.66□□□□□ -0.06
TSKU-203ENST00000527881 FAM53CQ9NYF3 392 aa14.66□□□□□ -0.06
TSKU-203ENST00000527881 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.66□□□□□ -0.06
TSKU-203ENST00000527881 QRICH2Q9H0J4 1663 aa14.66□□□□□ -0.06
TSKU-203ENST00000527881 COL3A1P02461 1466 aaPredicted RBP14.66□□□□□ -0.06
TSKU-203ENST00000527881 VGFO15240 615 aaPredicted RBP14.66□□□□□ -0.06
TSKU-203ENST00000527881 SURF6O75683 361 aaKnown RBP14.66□□□□□ -0.06
TSKU-203ENST00000527881 ZKSCAN1P17029 563 aaPredicted RBP14.66□□□□□ -0.06
TSKU-203ENST00000527881 OS9Q13438 667 aaPredicted RBP14.66□□□□□ -0.06
TSKU-203ENST00000527881 CNTROBQ8N137 903 aa14.66□□□□□ -0.06
TSKU-203ENST00000527881 HYPKQ9NX55 129 aa14.66□□□□□ -0.06
TSKU-203ENST00000527881 SGSM2O43147 1006 aa14.65□□□□□ -0.06
TSKU-203ENST00000527881 CASQ1P31415 396 aa14.65□□□□□ -0.06
TSKU-203ENST00000527881 C11orf57Q6ZUT1 292 aaPredicted RBP14.65□□□□□ -0.06
TSKU-203ENST00000527881 LCMT1Q9UIC8 334 aa14.65□□□□□ -0.06
TSKU-203ENST00000527881 LEO1Q8WVC0 666 aaPredicted RBP14.65□□□□□ -0.06
TSKU-203ENST00000527881 STK31Q9BXU1 1019 aa14.65□□□□□ -0.06
TSKU-203ENST00000527881 PPP6R1Q9UPN7 881 aa14.65□□□□□ -0.06
TSKU-203ENST00000527881 RIMS2Q9UQ26 1411 aa14.65□□□□□ -0.06
TSKU-203ENST00000527881 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.65□□□□□ -0.06
TSKU-203ENST00000527881 H3BQV1 296 aa14.65□□□□□ -0.06
TSKU-203ENST00000527881 DHX16O60231 1041 aaKnown RBP14.65□□□□□ -0.06
TSKU-203ENST00000527881 APPP05067 770 aa14.65□□□□□ -0.06
TSKU-203ENST00000527881 ME3Q16798 604 aa14.65□□□□□ -0.06
TSKU-203ENST00000527881 NOM1Q5C9Z4 860 aaKnown RBP14.65□□□□□ -0.06
TSKU-203ENST00000527881 IFFO2Q5TF58 517 aa14.65□□□□□ -0.06
TSKU-203ENST00000527881 SFPQP23246 707 aaKnown RBP eCLIP14.64□□□□□ -0.07
TSKU-203ENST00000527881 CCZ1BP86790 482 aa14.64□□□□□ -0.07
TSKU-203ENST00000527881 CCZ1P86791 482 aaPredicted RBP14.64□□□□□ -0.07
TSKU-203ENST00000527881 ADCK5Q3MIX3 580 aa14.64□□□□□ -0.07
TSKU-203ENST00000527881 LEKR1Q6ZMV7 388 aa14.64□□□□□ -0.07
TSKU-203ENST00000527881 AOPEPQ8N6M6 819 aa14.64□□□□□ -0.07
TSKU-203ENST00000527881 SECISBP2LQ93073 1101 aaKnown RBP14.64□□□□□ -0.07
TSKU-203ENST00000527881 MRFAP1L1Q96HT8 127 aa14.64□□□□□ -0.07
TSKU-203ENST00000527881 PRAM1Q96QH2 718 aa14.64□□□□□ -0.07
TSKU-203ENST00000527881 GNAI3P08754 354 aa14.64□□□□□ -0.07
TSKU-203ENST00000527881 CDC25BP30305 580 aa14.64□□□□□ -0.07
TSKU-203ENST00000527881 RRS1Q15050 365 aaKnown RBP14.64□□□□□ -0.07
TSKU-203ENST00000527881 STX1AQ16623 288 aa14.64□□□□□ -0.07
TSKU-203ENST00000527881 TMC6Q7Z403 805 aa14.64□□□□□ -0.07
TSKU-203ENST00000527881 LOC102724159A0A0B4J2E5 919 aa14.63□□□□□ -0.07
TSKU-203ENST00000527881 RAB11FIP3O75154 756 aa14.63□□□□□ -0.07
TSKU-203ENST00000527881 MLECQ14165 292 aa14.63□□□□□ -0.07
TSKU-203ENST00000527881 SMC1AQ14683 1233 aaKnown RBP14.63□□□□□ -0.07
TSKU-203ENST00000527881 PWP2Q15269 919 aaKnown RBP14.63□□□□□ -0.07
TSKU-203ENST00000527881 TEX2Q8IWB9 1127 aa14.63□□□□□ -0.07
TSKU-203ENST00000527881 GSDMDP57764 484 aa14.63□□□□□ -0.07
TSKU-203ENST00000527881 KLHL34Q8N239 644 aa14.63□□□□□ -0.07
TSKU-203ENST00000527881 ERCC4Q92889 916 aaPredicted RBP14.63□□□□□ -0.07
TSKU-203ENST00000527881 PUS7Q96PZ0 661 aaKnown RBP14.63□□□□□ -0.07
TSKU-203ENST00000527881 EPC1Q9H2F5 836 aa14.63□□□□□ -0.07
TSKU-203ENST00000527881 CCDC73Q6ZRK6 1079 aa14.63□□□□□ -0.07
TSKU-203ENST00000527881 PPP1R13BQ96KQ4 1090 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms