RNA–Protein interactions for RNA: ENST00000527840.1

SOX6-209, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-209ENST00000527840 GDPD2Q9HCC8 539 aa7.64□□□□□ -1.19
SOX6-209ENST00000527840 ABL2P42684 1182 aa7.63□□□□□ -1.19
SOX6-209ENST00000527840 NEUROD1Q13562 356 aa7.63□□□□□ -1.19
SOX6-209ENST00000527840 COL9A3Q14050 684 aaPredicted RBP7.63□□□□□ -1.19
SOX6-209ENST00000527840 L3MBTL2Q969R5 705 aa7.63□□□□□ -1.19
SOX6-209ENST00000527840 NOD1Q9Y239 953 aa7.63□□□□□ -1.19
SOX6-209ENST00000527840 PARP3Q9Y6F1 533 aa7.63□□□□□ -1.19
SOX6-209ENST00000527840 NOS2P35228 1153 aa7.62□□□□□ -1.19
SOX6-209ENST00000527840 EPHA4P54764 986 aa7.62□□□□□ -1.19
SOX6-209ENST00000527840 TRIM28Q13263 835 aaKnown RBP7.62□□□□□ -1.19
SOX6-209ENST00000527840 FOXD4L6Q3SYB3 417 aaPredicted RBP7.62□□□□□ -1.19
SOX6-209ENST00000527840 FOXD4L3Q6VB84 417 aaPredicted RBP7.62□□□□□ -1.19
SOX6-209ENST00000527840 LRRC69Q6ZNQ3 347 aa7.62□□□□□ -1.19
SOX6-209ENST00000527840 ZNF358Q9NW07 568 aa7.62□□□□□ -1.19
SOX6-209ENST00000527840 KRTAP9-6A0A140TA67 174 aa7.61□□□□□ -1.19
SOX6-209ENST00000527840 ALBP02768 609 aa7.61□□□□□ -1.19
SOX6-209ENST00000527840 NID1P14543 1247 aa7.61□□□□□ -1.19
SOX6-209ENST00000527840 GTF2IP78347 998 aa7.61□□□□□ -1.19
SOX6-209ENST00000527840 MICALL1Q8N3F8 863 aa7.61□□□□□ -1.19
SOX6-209ENST00000527840 NFATC2IPQ8NCF5 419 aa7.61□□□□□ -1.19
SOX6-209ENST00000527840 NEUROD4Q9HD90 331 aa7.61□□□□□ -1.19
SOX6-209ENST00000527840 ADH7P40394 386 aa7.6□□□□□ -1.19
SOX6-209ENST00000527840 ARTNQ5T4W7 220 aa7.6□□□□□ -1.19
SOX6-209ENST00000527840 SLC9A9Q8IVB4 645 aa7.6□□□□□ -1.19
SOX6-209ENST00000527840 SLC30A3Q99726 388 aa7.6□□□□□ -1.19
SOX6-209ENST00000527840 ZFP64Q9NPA5 681 aa7.6□□□□□ -1.19
SOX6-209ENST00000527840 STARD13Q9Y3M8 1113 aa7.6□□□□□ -1.19
SOX6-209ENST00000527840 PIK3CDO00329 1044 aa7.59□□□□□ -1.19
SOX6-209ENST00000527840 H2AFB1P0C5Y9 115 aa7.59□□□□□ -1.19
SOX6-209ENST00000527840 H2AFB2P0C5Z0 115 aa7.59□□□□□ -1.19
SOX6-209ENST00000527840 KCNQ4P56696 695 aa7.59□□□□□ -1.19
SOX6-209ENST00000527840 PSME1Q06323 249 aa7.59□□□□□ -1.19
SOX6-209ENST00000527840 SPEM2Q0P670 501 aa7.59□□□□□ -1.19
SOX6-209ENST00000527840 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.59□□□□□ -1.19
SOX6-209ENST00000527840 RHPN1Q8TCX5 695 aa7.59□□□□□ -1.19
SOX6-209ENST00000527840 C7orf43Q8WVR3 580 aa7.59□□□□□ -1.19
SOX6-209ENST00000527840 SERTM1A2A2V5 107 aa7.58□□□□□ -1.2
SOX6-209ENST00000527840 C9orf172C9J069 976 aa7.58□□□□□ -1.2
SOX6-209ENST00000527840 FAM229AH3BQW9 127 aa7.58□□□□□ -1.2
SOX6-209ENST00000527840 SKIP12755 728 aa7.58□□□□□ -1.2
SOX6-209ENST00000527840 HIRAP54198 1017 aaPredicted RBP7.58□□□□□ -1.2
SOX6-209ENST00000527840 SFSWAPQ12872 951 aaKnown RBP7.58□□□□□ -1.2
SOX6-209ENST00000527840 PRSS36Q5K4E3 855 aa7.58□□□□□ -1.2
SOX6-209ENST00000527840 C1orf53Q5VUE5 145 aa7.58□□□□□ -1.2
SOX6-209ENST00000527840 C20orf204Q6ZNR8 217 aa7.58□□□□□ -1.2
SOX6-209ENST00000527840 ZNF232Q9UNY5 417 aa7.58□□□□□ -1.2
SOX6-209ENST00000527840 PSMA6P60900 246 aaKnown RBP7.57□□□□□ -1.2
SOX6-209ENST00000527840 NCOA4Q13772 614 aa7.57□□□□□ -1.2
SOX6-209ENST00000527840 ADGRE1Q14246 886 aa7.57□□□□□ -1.2
SOX6-209ENST00000527840 BRD7Q9NPI1 651 aa7.57□□□□□ -1.2
SOX6-209ENST00000527840 ANKIB1Q9P2G1 1089 aa7.57□□□□□ -1.2
SOX6-209ENST00000527840 POTEAQ6S8J7 498 aa7.56□□□□□ -1.2
SOX6-209ENST00000527840 CHMP3Q9Y3E7 222 aa7.56□□□□□ -1.2
SOX6-209ENST00000527840 LILRB5O75023 590 aa7.55□□□□□ -1.2
SOX6-209ENST00000527840 ELNP15502 786 aa7.55□□□□□ -1.2
SOX6-209ENST00000527840 NRG1Q02297 640 aaPredicted RBP7.55□□□□□ -1.2
SOX6-209ENST00000527840 MCM6Q14566 821 aa7.55□□□□□ -1.2
SOX6-209ENST00000527840 GRIK4Q16099 956 aa7.55□□□□□ -1.2
SOX6-209ENST00000527840 C8orf86Q6ZUL3 223 aa7.55□□□□□ -1.2
SOX6-209ENST00000527840 TRIM50Q86XT4 487 aa7.55□□□□□ -1.2
SOX6-209ENST00000527840 EFCC1Q9HA90 598 aa7.55□□□□□ -1.2
SOX6-209ENST00000527840 TYRO3Q06418 890 aa7.54□□□□□ -1.2
SOX6-209ENST00000527840 LRP8Q14114 963 aa7.54□□□□□ -1.2
SOX6-209ENST00000527840 MBTPS1Q14703 1052 aa7.54□□□□□ -1.2
SOX6-209ENST00000527840 NBPF11Q86T75 865 aa7.54□□□□□ -1.2
SOX6-209ENST00000527840 TXNRD3Q86VQ6 643 aa7.54□□□□□ -1.2
SOX6-209ENST00000527840 TNS4Q8IZW8 715 aa7.54□□□□□ -1.2
SOX6-209ENST00000527840 CEP63Q96MT8 703 aa7.54□□□□□ -1.2
SOX6-209ENST00000527840 ALG2Q9H553 416 aa7.54□□□□□ -1.2
SOX6-209ENST00000527840 KCNH4Q9UQ05 1017 aa7.54□□□□□ -1.2
SOX6-209ENST00000527840 USP17L5A8MUK1 530 aa7.53□□□□□ -1.2
SOX6-209ENST00000527840 TRAPPC3LQ5T215 181 aa7.53□□□□□ -1.2
SOX6-209ENST00000527840 SH3PXD2AQ5TCZ1 1133 aa7.53□□□□□ -1.2
SOX6-209ENST00000527840 RAB44Q7Z6P3 723 aaPredicted RBP7.53□□□□□ -1.2
SOX6-209ENST00000527840 A0A0A0MRY4 1105 aa7.52□□□□□ -1.21
SOX6-209ENST00000527840 M0R2N6 131 aa7.52□□□□□ -1.21
SOX6-209ENST00000527840 SELPP16109 830 aa7.52□□□□□ -1.21
SOX6-209ENST00000527840 ATP1A2P50993 1020 aa7.52□□□□□ -1.21
SOX6-209ENST00000527840 RAC1P63000 192 aa7.52□□□□□ -1.21
SOX6-209ENST00000527840 HIF1AQ16665 826 aa7.52□□□□□ -1.21
SOX6-209ENST00000527840 TBCELQ5QJ74 424 aa7.52□□□□□ -1.21
SOX6-209ENST00000527840 KRTAP1-3Q8IUG1 177 aa7.52□□□□□ -1.21
SOX6-209ENST00000527840 WWC1Q8IX03 1113 aa7.52□□□□□ -1.21
SOX6-209ENST00000527840 LENG1Q96BZ8 264 aaPredicted RBP7.52□□□□□ -1.21
SOX6-209ENST00000527840 TPCN2Q8NHX9 752 aa7.51□□□□□ -1.21
SOX6-209ENST00000527840 HSH2DQ96JZ2 352 aa7.51□□□□□ -1.21
SOX6-209ENST00000527840 PHACTR1Q9C0D0 580 aa7.51□□□□□ -1.21
SOX6-209ENST00000527840 PLEKHM2Q8IWE5 1019 aa7.5□□□□□ -1.21
SOX6-209ENST00000527840 BHMTQ93088 406 aa7.5□□□□□ -1.21
SOX6-209ENST00000527840 KRTAP4-12Q9BQ66 201 aa7.5□□□□□ -1.21
SOX6-209ENST00000527840 UBE2OQ9C0C9 1292 aaKnown RBP7.5□□□□□ -1.21
SOX6-209ENST00000527840 TSPAN10Q9H1Z9 355 aaPredicted RBP7.5□□□□□ -1.21
SOX6-209ENST00000527840 COG6Q9Y2V7 657 aa7.5□□□□□ -1.21
SOX6-209ENST00000527840 SFI1A8K8P3 1242 aa7.49□□□□□ -1.21
SOX6-209ENST00000527840 CCDC102BQ68D86 513 aa7.49□□□□□ -1.21
SOX6-209ENST00000527840 SUSD3Q96L08 255 aa7.49□□□□□ -1.21
SOX6-209ENST00000527840 JPH1Q9HDC5 661 aaPredicted RBP7.49□□□□□ -1.21
SOX6-209ENST00000527840 SLC6A14Q9UN76 642 aa7.49□□□□□ -1.21
SOX6-209ENST00000527840 DEPDC4Q8N2C3 294 aa7.48□□□□□ -1.21
SOX6-209ENST00000527840 KIAA1024Q9UPX6 916 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms