RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 BRPF1P55201 1214 aaPredicted RBP13.86□□□□□ -0.19
NEDD8-205ENST00000527046 AIMP1Q12904 312 aaKnown RBP13.86□□□□□ -0.19
NEDD8-205ENST00000527046 ATF5Q9Y2D1 282 aaPredicted RBP13.86□□□□□ -0.19
NEDD8-205ENST00000527046 ZNF330Q9Y3S2 320 aaPredicted RBP13.86□□□□□ -0.19
NEDD8-205ENST00000527046 MAP3K15Q6ZN16 1313 aa13.86□□□□□ -0.19
NEDD8-205ENST00000527046 BCAR3O75815 825 aa13.85□□□□□ -0.19
NEDD8-205ENST00000527046 ALDH1L2Q3SY69 923 aa13.85□□□□□ -0.19
NEDD8-205ENST00000527046 TBC1D9BQ66K14 1250 aa13.85□□□□□ -0.19
NEDD8-205ENST00000527046 ZNF428Q96B54 188 aa13.85□□□□□ -0.19
NEDD8-205ENST00000527046 SCN7AQ01118 1682 aa13.85□□□□□ -0.19
NEDD8-205ENST00000527046 ADCY9O60503 1353 aa13.84□□□□□ -0.19
NEDD8-205ENST00000527046 RGL2O15211 777 aa13.84□□□□□ -0.19
NEDD8-205ENST00000527046 DDR1Q08345 913 aa13.84□□□□□ -0.19
NEDD8-205ENST00000527046 FLIIQ13045 1269 aa13.84□□□□□ -0.19
NEDD8-205ENST00000527046 NFIXQ14938 502 aa13.84□□□□□ -0.19
NEDD8-205ENST00000527046 MSL1Q68DK7 614 aa13.84□□□□□ -0.19
NEDD8-205ENST00000527046 GIGYF2Q6Y7W6 1299 aaKnown RBP13.84□□□□□ -0.19
NEDD8-205ENST00000527046 ANKRD13DQ6ZTN6 518 aa13.84□□□□□ -0.19
NEDD8-205ENST00000527046 ZNF34Q8IZ26 560 aa13.84□□□□□ -0.19
NEDD8-205ENST00000527046 BCL2L13Q9BXK5 485 aa13.84□□□□□ -0.19
NEDD8-205ENST00000527046 MTFR1LQ9H019 292 aa13.84□□□□□ -0.19
NEDD8-205ENST00000527046 ZBTB3Q9H5J0 574 aa13.84□□□□□ -0.19
NEDD8-205ENST00000527046 MSH5O43196 834 aa13.83□□□□□ -0.2
NEDD8-205ENST00000527046 ZPR1O75312 459 aa13.83□□□□□ -0.2
NEDD8-205ENST00000527046 CLEC4GQ6UXB4 293 aa13.83□□□□□ -0.2
NEDD8-205ENST00000527046 NLGN1Q8N2Q7 840 aa13.83□□□□□ -0.2
NEDD8-205ENST00000527046 PLBD2Q8NHP8 589 aa13.83□□□□□ -0.2
NEDD8-205ENST00000527046 PI4KAP2A4QPH2 592 aa13.82□□□□□ -0.2
NEDD8-205ENST00000527046 KSR2Q6VAB6 950 aa13.82□□□□□ -0.2
NEDD8-205ENST00000527046 PI4KAP1Q8N8J0 262 aa13.82□□□□□ -0.2
NEDD8-205ENST00000527046 STK31Q9BXU1 1019 aa13.82□□□□□ -0.2
NEDD8-205ENST00000527046 CHMP4AQ9BY43 222 aa13.82□□□□□ -0.2
NEDD8-205ENST00000527046 ARFGEF2Q9Y6D5 1785 aa13.81□□□□□ -0.2
NEDD8-205ENST00000527046 POLRMTO00411 1230 aaKnown RBP13.81□□□□□ -0.2
NEDD8-205ENST00000527046 TCIRG1Q13488 830 aa13.81□□□□□ -0.2
NEDD8-205ENST00000527046 ARXQ96QS3 562 aa13.81□□□□□ -0.2
NEDD8-205ENST00000527046 ISCA1Q9BUE6 129 aa13.81□□□□□ -0.2
NEDD8-205ENST00000527046 NOB1Q9ULX3 412 aaKnown RBP13.81□□□□□ -0.2
NEDD8-205ENST00000527046 TNNQ9UQP3 1299 aa13.81□□□□□ -0.2
NEDD8-205ENST00000527046 UBN2Q6ZU65 1347 aa13.81□□□□□ -0.2
NEDD8-205ENST00000527046 NRXN2Q9P2S2 1712 aa13.81□□□□□ -0.2
NEDD8-205ENST00000527046 F6X3S4 739 aa13.8□□□□□ -0.2
NEDD8-205ENST00000527046 IGKV5-2P06315 115 aa13.8□□□□□ -0.2
NEDD8-205ENST00000527046 METTL22Q9BUU2 404 aaPredicted RBP13.8□□□□□ -0.2
NEDD8-205ENST00000527046 MAP3K2Q9Y2U5 619 aa13.8□□□□□ -0.2
NEDD8-205ENST00000527046 AFDNP55196 1824 aaKnown RBP13.8□□□□□ -0.2
NEDD8-205ENST00000527046 ATP10DQ9P241 1426 aa13.8□□□□□ -0.2
NEDD8-205ENST00000527046 MMP10P09238 476 aa13.79□□□□□ -0.2
NEDD8-205ENST00000527046 TRIM28Q13263 835 aaKnown RBP13.79□□□□□ -0.2
NEDD8-205ENST00000527046 SUSD4Q5VX71 490 aa13.79□□□□□ -0.2
NEDD8-205ENST00000527046 KIF6Q6ZMV9 814 aa13.79□□□□□ -0.2
NEDD8-205ENST00000527046 SMC4Q9NTJ3 1288 aa13.79□□□□□ -0.2
NEDD8-205ENST00000527046 GPTP24298 496 aa13.78□□□□□ -0.2
NEDD8-205ENST00000527046 BICDL1Q6ZP65 573 aa13.78□□□□□ -0.2
NEDD8-205ENST00000527046 RIC3Q7Z5B4 369 aa13.78□□□□□ -0.2
NEDD8-205ENST00000527046 SPON1Q9HCB6 807 aa13.78□□□□□ -0.2
NEDD8-205ENST00000527046 ANKRD36CQ5JPF3 1778 aa13.78□□□□□ -0.2
NEDD8-205ENST00000527046 ATP5J2-PTCD1G3V325 749 aa13.77□□□□□ -0.21
NEDD8-205ENST00000527046 SERPINB2P05120 415 aa13.77□□□□□ -0.21
NEDD8-205ENST00000527046 FKBP5Q13451 457 aaPredicted RBP13.77□□□□□ -0.21
NEDD8-205ENST00000527046 BEND3Q5T5X7 828 aa13.77□□□□□ -0.21
NEDD8-205ENST00000527046 NLRP10Q86W26 655 aa13.77□□□□□ -0.21
NEDD8-205ENST00000527046 SYNE4Q8N205 404 aa13.77□□□□□ -0.21
NEDD8-205ENST00000527046 DNAAF4Q8WXU2 420 aa13.77□□□□□ -0.21
NEDD8-205ENST00000527046 ARHGAP45Q92619 1136 aa13.77□□□□□ -0.21
NEDD8-205ENST00000527046 RCAN3Q9UKA8 241 aa13.77□□□□□ -0.21
NEDD8-205ENST00000527046 NIP7Q9Y221 180 aaKnown RBP eCLIP13.77□□□□□ -0.21
NEDD8-205ENST00000527046 CWF19L2Q2TBE0 894 aaKnown RBP13.76□□□□□ -0.21
NEDD8-205ENST00000527046 NPM2Q86SE8 214 aaKnown RBP13.76□□□□□ -0.21
NEDD8-205ENST00000527046 MYD88Q99836 296 aa13.76□□□□□ -0.21
NEDD8-205ENST00000527046 PTPRCP08575 1304 aa13.75□□□□□ -0.21
NEDD8-205ENST00000527046 NTSR2O95665 410 aa13.75□□□□□ -0.21
NEDD8-205ENST00000527046 PRR5LQ6MZQ0 368 aa13.75□□□□□ -0.21
NEDD8-205ENST00000527046 CCDC24Q8N4L8 307 aa13.75□□□□□ -0.21
NEDD8-205ENST00000527046 SETDB2Q96T68 719 aa13.75□□□□□ -0.21
NEDD8-205ENST00000527046 ZNF652Q9Y2D9 606 aa13.75□□□□□ -0.21
NEDD8-205ENST00000527046 CARMIL3Q8ND23 1372 aa13.74□□□□□ -0.21
NEDD8-205ENST00000527046 KIF13BQ9NQT8 1826 aa13.74□□□□□ -0.21
NEDD8-205ENST00000527046 NEURL1BA8MQ27 555 aa13.74□□□□□ -0.21
NEDD8-205ENST00000527046 DDX58O95786 925 aaKnown RBP13.74□□□□□ -0.21
NEDD8-205ENST00000527046 RLBP1P12271 317 aa13.74□□□□□ -0.21
NEDD8-205ENST00000527046 TRIM27P14373 513 aa13.74□□□□□ -0.21
NEDD8-205ENST00000527046 CASP7P55210 303 aa13.74□□□□□ -0.21
NEDD8-205ENST00000527046 LRP5O75197 1615 aa13.74□□□□□ -0.21
NEDD8-205ENST00000527046 ANKRD31Q8N7Z5 1873 aa13.74□□□□□ -0.21
NEDD8-205ENST00000527046 KIAA1551Q9HCM1 1747 aa13.73□□□□□ -0.21
NEDD8-205ENST00000527046 H7C1W4 665 aa13.73□□□□□ -0.21
NEDD8-205ENST00000527046 HSP90AB3PQ58FF7 597 aa13.73□□□□□ -0.21
NEDD8-205ENST00000527046 SLC10A5Q5PT55 438 aa13.73□□□□□ -0.21
NEDD8-205ENST00000527046 LINS1Q8NG48 757 aa13.73□□□□□ -0.21
NEDD8-205ENST00000527046 JARID2Q92833 1246 aaPredicted RBP13.73□□□□□ -0.21
NEDD8-205ENST00000527046 PARP3Q9Y6F1 533 aa13.73□□□□□ -0.21
NEDD8-205ENST00000527046 ABCC4O15439 1325 aa13.72□□□□□ -0.21
NEDD8-205ENST00000527046 KLRG2A4D1S0 409 aaPredicted RBP13.72□□□□□ -0.21
NEDD8-205ENST00000527046 FAM177BA6PVY3 158 aa13.72□□□□□ -0.21
NEDD8-205ENST00000527046 PLIN1O60240 522 aa13.72□□□□□ -0.21
NEDD8-205ENST00000527046 ERFEQ4G0M1 354 aa13.72□□□□□ -0.21
NEDD8-205ENST00000527046 PARP10Q53GL7 1025 aa13.72□□□□□ -0.21
NEDD8-205ENST00000527046 ATF7IPQ6VMQ6 1270 aa13.72□□□□□ -0.21
NEDD8-205ENST00000527046 C3orf67Q6ZVT6 689 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms