RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 IL6STP40189 918 aaPredicted RBP25.17■■□□□ 1.62
PKP3-204ENST00000526971 JMYQ8N9B5 988 aa25.17■■□□□ 1.62
PKP3-204ENST00000526971 SMC1BQ8NDV3 1235 aa25.17■■□□□ 1.62
PKP3-204ENST00000526971 FMNL2Q96PY5 1086 aa25.16■■□□□ 1.62
PKP3-204ENST00000526971 BTBD11A6QL63 1104 aa25.15■■□□□ 1.62
PKP3-204ENST00000526971 CAMTA2O94983 1202 aa25.15■■□□□ 1.62
PKP3-204ENST00000526971 ZNF622Q969S3 477 aaKnown RBP eCLIP25.15■■□□□ 1.62
PKP3-204ENST00000526971 BRIP1Q9BX63 1249 aa25.15■■□□□ 1.62
PKP3-204ENST00000526971 TEX13AQ9BXU3 409 aaPredicted RBP25.15■■□□□ 1.62
PKP3-204ENST00000526971 ZNF219Q9P2Y4 722 aaPredicted RBP25.15■■□□□ 1.62
PKP3-204ENST00000526971 POTECB2RU33 542 aa25.14■■□□□ 1.62
PKP3-204ENST00000526971 CCDC146Q8IYE0 955 aa25.14■■□□□ 1.62
PKP3-204ENST00000526971 C21orf2O43822 256 aa25.13■■□□□ 1.61
PKP3-204ENST00000526971 VEGFAP15692 232 aaPredicted RBP25.13■■□□□ 1.61
PKP3-204ENST00000526971 PIP4K2AP48426 406 aaPredicted RBP25.13■■□□□ 1.61
PKP3-204ENST00000526971 RUNDC1Q96C34 613 aa25.13■■□□□ 1.61
PKP3-204ENST00000526971 PRAMEF22A3QJZ6 481 aa25.12■■□□□ 1.61
PKP3-204ENST00000526971 CCDC184Q52MB2 194 aa25.12■■□□□ 1.61
PKP3-204ENST00000526971 PDE6BP35913 854 aa25.11■■□□□ 1.61
PKP3-204ENST00000526971 TMPOP42166 694 aaKnown RBP25.11■■□□□ 1.61
PKP3-204ENST00000526971 RIPK4P57078 832 aa25.11■■□□□ 1.61
PKP3-204ENST00000526971 TAF7Q15545 349 aaPredicted RBP25.11■■□□□ 1.61
PKP3-204ENST00000526971 USP16Q9Y5T5 823 aa25.1■■□□□ 1.61
PKP3-204ENST00000526971 CNBD1Q8NA66 436 aa25.09■■□□□ 1.61
PKP3-204ENST00000526971 PDZRN3Q9UPQ7 1066 aa25.09■■□□□ 1.61
PKP3-204ENST00000526971 DZIP3Q86Y13 1208 aaKnown RBP25.08■■□□□ 1.61
PKP3-204ENST00000526971 SETDB2Q96T68 719 aa25.08■■□□□ 1.61
PKP3-204ENST00000526971 THUMPD2Q9BTF0 503 aaKnown RBP25.08■■□□□ 1.61
PKP3-204ENST00000526971 COL13A1Q5TAT6 717 aaPredicted RBP25.07■■□□□ 1.6
PKP3-204ENST00000526971 RRP7AQ9Y3A4 280 aaKnown RBP25.07■■□□□ 1.6
PKP3-204ENST00000526971 DLG5Q8TDM6 1919 aa25.07■■□□□ 1.6
PKP3-204ENST00000526971 LAMB4A4D0S4 1761 aa25.07■■□□□ 1.6
PKP3-204ENST00000526971 SRGNP10124 158 aa25.06■■□□□ 1.6
PKP3-204ENST00000526971 LMOD3Q0VAK6 560 aa25.06■■□□□ 1.6
PKP3-204ENST00000526971 ERFEQ4G0M1 354 aa25.06■■□□□ 1.6
PKP3-204ENST00000526971 PRPF40BQ6NWY9 871 aaKnown RBP25.06■■□□□ 1.6
PKP3-204ENST00000526971 PNISRQ8TF01 805 aaKnown RBP25.06■■□□□ 1.6
PKP3-204ENST00000526971 LTBP3Q9NS15 1303 aa25.06■■□□□ 1.6
PKP3-204ENST00000526971 MIS18AQ9NYP9 233 aa25.05■■□□□ 1.6
PKP3-204ENST00000526971 STYK1Q6J9G0 422 aa25.04■■□□□ 1.6
PKP3-204ENST00000526971 TAOK3Q9H2K8 898 aa25.04■■□□□ 1.6
PKP3-204ENST00000526971 MRS2Q9HD23 443 aa25.04■■□□□ 1.6
PKP3-204ENST00000526971 ST5P78524 1137 aa25.03■■□□□ 1.6
PKP3-204ENST00000526971 NEUROD2Q15784 382 aa25.03■■□□□ 1.6
PKP3-204ENST00000526971 CNKSR1Q969H4 720 aa25.03■■□□□ 1.6
PKP3-204ENST00000526971 NBPF26B4DH59 902 aa25.02■■□□□ 1.6
PKP3-204ENST00000526971 NBPF10Q6P3W6 841 aaKnown RBP25.02■■□□□ 1.6
PKP3-204ENST00000526971 NPM2Q86SE8 214 aaKnown RBP25.02■■□□□ 1.6
PKP3-204ENST00000526971 NBPF15Q8N660 670 aa25.02■■□□□ 1.6
PKP3-204ENST00000526971 KDM3BQ7LBC6 1761 aa25.02■■□□□ 1.6
PKP3-204ENST00000526971 NPHP1O15259 732 aa25.01■■□□□ 1.59
PKP3-204ENST00000526971 POTEIP0CG38 1075 aa25.01■■□□□ 1.59
PKP3-204ENST00000526971 POTEJP0CG39 1038 aa25.01■■□□□ 1.59
PKP3-204ENST00000526971 DPY19L2Q6NUT2 758 aa25.01■■□□□ 1.59
PKP3-204ENST00000526971 MASTLQ96GX5 879 aa25.01■■□□□ 1.59
PKP3-204ENST00000526971 SNRPA1P09661 255 aaKnown RBP25■■□□□ 1.59
PKP3-204ENST00000526971 TRIM35Q9UPQ4 493 aa25■■□□□ 1.59
PKP3-204ENST00000526971 DDNO94850 711 aaPredicted RBP24.99■■□□□ 1.59
PKP3-204ENST00000526971 SCN4AP35499 1836 aa24.99■■□□□ 1.59
PKP3-204ENST00000526971 CLEC4GQ6UXB4 293 aa24.99■■□□□ 1.59
PKP3-204ENST00000526971 NBPF5PQ86XG9 351 aaPredicted RBP24.99■■□□□ 1.59
PKP3-204ENST00000526971 C7orf43Q8WVR3 580 aa24.99■■□□□ 1.59
PKP3-204ENST00000526971 NUP98P52948 1817 aa24.98■■□□□ 1.59
PKP3-204ENST00000526971 APAF1O14727 1248 aa24.98■■□□□ 1.59
PKP3-204ENST00000526971 EIF4A1P60842 406 aaKnown RBP24.96■■□□□ 1.59
PKP3-204ENST00000526971 OLFM4Q6UX06 510 aa24.96■■□□□ 1.59
PKP3-204ENST00000526971 BABAM1Q9NWV8 329 aa24.96■■□□□ 1.59
PKP3-204ENST00000526971 KLRG2A4D1S0 409 aaPredicted RBP24.95■■□□□ 1.58
PKP3-204ENST00000526971 HSPA1AP0DMV8 641 aaKnown RBP24.95■■□□□ 1.58
PKP3-204ENST00000526971 HSPA1BP0DMV9 641 aaKnown RBP24.95■■□□□ 1.58
PKP3-204ENST00000526971 SOGA3Q5TF21 947 aa24.95■■□□□ 1.58
PKP3-204ENST00000526971 TSPYL4Q9UJ04 414 aa24.95■■□□□ 1.58
PKP3-204ENST00000526971 NIP7Q9Y221 180 aaKnown RBP eCLIP24.95■■□□□ 1.58
PKP3-204ENST00000526971 ZNF652Q9Y2D9 606 aa24.95■■□□□ 1.58
PKP3-204ENST00000526971 CHADLQ6NUI6 762 aa24.94■■□□□ 1.58
PKP3-204ENST00000526971 FAM177BA6PVY3 158 aa24.93■■□□□ 1.58
PKP3-204ENST00000526971 NPR1P16066 1061 aa24.93■■□□□ 1.58
PKP3-204ENST00000526971 HLFQ16534 295 aa24.93■■□□□ 1.58
PKP3-204ENST00000526971 CCDC93Q567U6 631 aa24.93■■□□□ 1.58
PKP3-204ENST00000526971 ADAMTSL1Q8N6G6 1762 aa24.93■■□□□ 1.58
PKP3-204ENST00000526971 ZNF541Q9H0D2 1346 aa24.92■■□□□ 1.58
PKP3-204ENST00000526971 SNED1Q8TER0 1413 aa24.92■■□□□ 1.58
PKP3-204ENST00000526971 RGL2O15211 777 aa24.91■■□□□ 1.58
PKP3-204ENST00000526971 ABCC12Q96J65 1359 aa24.91■■□□□ 1.58
PKP3-204ENST00000526971 CHL1O00533 1208 aa24.9■■□□□ 1.58
PKP3-204ENST00000526971 L3MBTL3Q96JM7 780 aaPredicted RBP24.9■■□□□ 1.58
PKP3-204ENST00000526971 ZNF277Q9NRM2 450 aaPredicted RBP24.9■■□□□ 1.58
PKP3-204ENST00000526971 FKBP4Q02790 459 aaKnown RBP eCLIP24.89■■□□□ 1.58
PKP3-204ENST00000526971 TPTE2Q6XPS3 522 aa24.89■■□□□ 1.58
PKP3-204ENST00000526971 TNS4Q8IZW8 715 aa24.89■■□□□ 1.58
PKP3-204ENST00000526971 CREBZFQ9NS37 354 aa24.89■■□□□ 1.58
PKP3-204ENST00000526971 CAPN15O75808 1086 aa24.88■■□□□ 1.57
PKP3-204ENST00000526971 TAF1DQ9H5J8 278 aaPredicted RBP24.88■■□□□ 1.57
PKP3-204ENST00000526971 MKRN1Q9UHC7 482 aaKnown RBP24.88■■□□□ 1.57
PKP3-204ENST00000526971 COL4A5P29400 1685 aa24.88■■□□□ 1.57
PKP3-204ENST00000526971 PASKQ96RG2 1323 aa24.87■■□□□ 1.57
PKP3-204ENST00000526971 LAS1LQ9Y4W2 734 aaKnown RBP24.87■■□□□ 1.57
PKP3-204ENST00000526971 IQCA1LA6NCM1 817 aa24.85■■□□□ 1.57
PKP3-204ENST00000526971 CALD1Q05682 793 aaKnown RBP24.85■■□□□ 1.57
PKP3-204ENST00000526971 LDHDQ86WU2 507 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms