RNA–Protein interactions for RNA: ENST00000525975.5

HIPK3-204, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-204ENST00000525975 SCAND2PQ9GZW5 306 aaPredicted RBP5.54□□□□□ -1.52
HIPK3-204ENST00000525975 ZNF446Q9NWS9 450 aa5.54□□□□□ -1.52
HIPK3-204ENST00000525975 STK26Q9P289 416 aa5.54□□□□□ -1.52
HIPK3-204ENST00000525975 ATP10DQ9P241 1426 aa5.53□□□□□ -1.52
HIPK3-204ENST00000525975 CAVIN2O95810 425 aa5.53□□□□□ -1.52
HIPK3-204ENST00000525975 MAP4K4O95819 1239 aaPredicted RBP5.53□□□□□ -1.52
HIPK3-204ENST00000525975 PDCP20941 246 aa5.53□□□□□ -1.52
HIPK3-204ENST00000525975 HSPA4P34932 840 aa5.53□□□□□ -1.52
HIPK3-204ENST00000525975 NKX1-1Q15270 411 aaPredicted RBP5.53□□□□□ -1.52
HIPK3-204ENST00000525975 TTC6Q86TZ1 520 aa5.53□□□□□ -1.52
HIPK3-204ENST00000525975 CCAR2Q8N163 923 aaKnown RBP5.53□□□□□ -1.52
HIPK3-204ENST00000525975 TFIP11Q9UBB9 837 aaKnown RBP5.53□□□□□ -1.52
HIPK3-204ENST00000525975 USP16Q9Y5T5 823 aa5.53□□□□□ -1.52
HIPK3-204ENST00000525975 A0A1W2PP64 1363 aa5.53□□□□□ -1.52
HIPK3-204ENST00000525975 NPHP3Q7Z494 1330 aa5.53□□□□□ -1.52
HIPK3-204ENST00000525975 FYB1O15117 783 aa5.53□□□□□ -1.52
HIPK3-204ENST00000525975 GNAI2P04899 355 aa5.53□□□□□ -1.52
HIPK3-204ENST00000525975 GSDMDP57764 484 aa5.53□□□□□ -1.52
HIPK3-204ENST00000525975 MUM1L1Q5H9M0 696 aa5.53□□□□□ -1.52
HIPK3-204ENST00000525975 NUTM2DQ5VT03 806 aaPredicted RBP5.53□□□□□ -1.52
HIPK3-204ENST00000525975 FAM173BQ6P4H8 233 aa5.53□□□□□ -1.52
HIPK3-204ENST00000525975 NYAP1Q6ZVC0 841 aa5.53□□□□□ -1.52
HIPK3-204ENST00000525975 RUFY3Q7L099 469 aa5.53□□□□□ -1.52
HIPK3-204ENST00000525975 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.53□□□□□ -1.52
HIPK3-204ENST00000525975 FBXW7Q969H0 707 aa5.53□□□□□ -1.52
HIPK3-204ENST00000525975 ZSCAN31Q96LW9 406 aaPredicted RBP5.53□□□□□ -1.52
HIPK3-204ENST00000525975 JAKMIP1Q96N16 626 aaKnown RBP5.53□□□□□ -1.52
HIPK3-204ENST00000525975 SH2B1Q9NRF2 756 aaPredicted RBP5.53□□□□□ -1.52
HIPK3-204ENST00000525975 TOMM22Q9NS69 142 aa5.53□□□□□ -1.52
HIPK3-204ENST00000525975 PDRG1Q9NUG6 133 aa5.53□□□□□ -1.52
HIPK3-204ENST00000525975 FHOD1Q9Y613 1164 aa5.53□□□□□ -1.52
HIPK3-204ENST00000525975 TRIM66O15016 1216 aa5.53□□□□□ -1.52
HIPK3-204ENST00000525975 DHX16O60231 1041 aaKnown RBP5.53□□□□□ -1.52
HIPK3-204ENST00000525975 CPA1P15085 419 aa5.53□□□□□ -1.52
HIPK3-204ENST00000525975 OAS2P29728 719 aaKnown RBP5.53□□□□□ -1.52
HIPK3-204ENST00000525975 CDC25BP30305 580 aa5.53□□□□□ -1.52
HIPK3-204ENST00000525975 DCTN1Q14203 1278 aa5.53□□□□□ -1.52
HIPK3-204ENST00000525975 SECISBP2LQ93073 1101 aaKnown RBP5.53□□□□□ -1.52
HIPK3-204ENST00000525975 CHMP4CQ96CF2 233 aa5.53□□□□□ -1.52
HIPK3-204ENST00000525975 CCDC34Q96HJ3 373 aa5.53□□□□□ -1.52
HIPK3-204ENST00000525975 CLSTN2Q9H4D0 955 aa5.53□□□□□ -1.52
HIPK3-204ENST00000525975 SNX14Q9Y5W7 946 aa5.53□□□□□ -1.52
HIPK3-204ENST00000525975 CYP46A1Q9Y6A2 500 aa5.53□□□□□ -1.52
HIPK3-204ENST00000525975 ELP1O95163 1332 aa5.53□□□□□ -1.52
HIPK3-204ENST00000525975 FAM83GA6ND36 823 aa5.52□□□□□ -1.53
HIPK3-204ENST00000525975 H2AFXP16104 143 aaPredicted RBP5.52□□□□□ -1.53
HIPK3-204ENST00000525975 ICE2Q659A1 982 aa5.52□□□□□ -1.53
HIPK3-204ENST00000525975 AFAP1Q8N556 730 aa5.52□□□□□ -1.53
HIPK3-204ENST00000525975 GPATCH11Q8N954 259 aa5.52□□□□□ -1.53
HIPK3-204ENST00000525975 SMARCE1Q969G3 411 aa5.52□□□□□ -1.53
HIPK3-204ENST00000525975 SYTL4Q96C24 671 aaPredicted RBP5.52□□□□□ -1.53
HIPK3-204ENST00000525975 DEF6Q9H4E7 631 aa5.52□□□□□ -1.53
HIPK3-204ENST00000525975 YY1AP1Q9H869 796 aa5.52□□□□□ -1.53
HIPK3-204ENST00000525975 C14orf93Q9H972 538 aaKnown RBP5.52□□□□□ -1.53
HIPK3-204ENST00000525975 FAM53CQ9NYF3 392 aa5.52□□□□□ -1.53
HIPK3-204ENST00000525975 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.52□□□□□ -1.53
HIPK3-204ENST00000525975 USP32Q8NFA0 1604 aa5.52□□□□□ -1.53
HIPK3-204ENST00000525975 PTPRCP08575 1304 aa5.52□□□□□ -1.53
HIPK3-204ENST00000525975 ABCC1P33527 1531 aa5.52□□□□□ -1.53
HIPK3-204ENST00000525975 URI1O94763 535 aaPredicted RBP5.52□□□□□ -1.53
HIPK3-204ENST00000525975 SMC2O95347 1197 aa5.52□□□□□ -1.53
HIPK3-204ENST00000525975 TPM1P09493 284 aa5.52□□□□□ -1.53
HIPK3-204ENST00000525975 SFPQP23246 707 aaKnown RBP eCLIP5.52□□□□□ -1.53
HIPK3-204ENST00000525975 PLA2G4AP47712 749 aa5.52□□□□□ -1.53
HIPK3-204ENST00000525975 TTC31Q49AM3 519 aaPredicted RBP5.52□□□□□ -1.53
HIPK3-204ENST00000525975 NECAB1Q8N987 351 aa5.52□□□□□ -1.53
HIPK3-204ENST00000525975 MRFAP1L1Q96HT8 127 aa5.52□□□□□ -1.53
HIPK3-204ENST00000525975 IL1RAPL2Q9NP60 686 aa5.52□□□□□ -1.53
HIPK3-204ENST00000525975 STAG3Q9UJ98 1225 aa5.52□□□□□ -1.53
HIPK3-204ENST00000525975 ARHGEF40Q8TER5 1519 aa5.52□□□□□ -1.53
HIPK3-204ENST00000525975 QRICH2Q9H0J4 1663 aa5.52□□□□□ -1.53
HIPK3-204ENST00000525975 A0A1B0GUL7 405 aa5.52□□□□□ -1.53
HIPK3-204ENST00000525975 ZKSCAN1P17029 563 aaPredicted RBP5.52□□□□□ -1.53
HIPK3-204ENST00000525975 ST5P78524 1137 aa5.52□□□□□ -1.53
HIPK3-204ENST00000525975 STX1AQ16623 288 aa5.52□□□□□ -1.53
HIPK3-204ENST00000525975 CWC27Q6UX04 472 aaKnown RBP5.52□□□□□ -1.53
HIPK3-204ENST00000525975 CNTROBQ8N137 903 aa5.52□□□□□ -1.53
HIPK3-204ENST00000525975 PUS7Q96PZ0 661 aaKnown RBP5.52□□□□□ -1.53
HIPK3-204ENST00000525975 SLC26A8Q96RN1 970 aa5.52□□□□□ -1.53
HIPK3-204ENST00000525975 GEMIN8Q9NWZ8 242 aaKnown RBP5.52□□□□□ -1.53
HIPK3-204ENST00000525975 DNAI1Q9UI46 699 aa5.52□□□□□ -1.53
HIPK3-204ENST00000525975 RRP15Q9Y3B9 282 aaKnown RBP5.52□□□□□ -1.53
HIPK3-204ENST00000525975 UGGT1Q9NYU2 1555 aa5.52□□□□□ -1.53
HIPK3-204ENST00000525975 MINK1Q8N4C8 1332 aaPredicted RBP5.52□□□□□ -1.53
HIPK3-204ENST00000525975 LRRC7Q96NW7 1537 aa5.51□□□□□ -1.53
HIPK3-204ENST00000525975 F6X3S4 739 aa5.51□□□□□ -1.53
HIPK3-204ENST00000525975 SEC31AO94979 1220 aaKnown RBP5.51□□□□□ -1.53
HIPK3-204ENST00000525975 LARGE1O95461 756 aa5.51□□□□□ -1.53
HIPK3-204ENST00000525975 CCT4P50991 539 aaKnown RBP5.51□□□□□ -1.53
HIPK3-204ENST00000525975 GYS2P54840 703 aa5.51□□□□□ -1.53
HIPK3-204ENST00000525975 SMC1AQ14683 1233 aaKnown RBP5.51□□□□□ -1.53
HIPK3-204ENST00000525975 CCDC73Q6ZRK6 1079 aa5.51□□□□□ -1.53
HIPK3-204ENST00000525975 CDC37L1Q7L3B6 337 aa5.51□□□□□ -1.53
HIPK3-204ENST00000525975 UNC5CLQ8IV45 518 aa5.51□□□□□ -1.53
HIPK3-204ENST00000525975 CEP57L1Q8IYX8 460 aa5.51□□□□□ -1.53
HIPK3-204ENST00000525975 GOLGA5Q8TBA6 731 aa5.51□□□□□ -1.53
HIPK3-204ENST00000525975 DDX54Q8TDD1 881 aaKnown RBP5.51□□□□□ -1.53
HIPK3-204ENST00000525975 MYCBPQ99417 103 aaPredicted RBP5.51□□□□□ -1.53
HIPK3-204ENST00000525975 POLKQ9UBT6 870 aa5.51□□□□□ -1.53
HIPK3-204ENST00000525975 SPG7Q9UQ90 795 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 622.6 ms