RNA–Protein interactions for RNA: ENST00000525957.1

ME3-204, Transcript of malic enzyme 3, humanhuman

TSL 3

Gene ME3, Length 619 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-204ENST00000525957 SLX4Q8IY92 1834 aa20.67■□□□□ 0.9
ME3-204ENST00000525957 SNRPA1P09661 255 aaKnown RBP20.67■□□□□ 0.9
ME3-204ENST00000525957 VEGFAP15692 232 aaPredicted RBP20.66■□□□□ 0.9
ME3-204ENST00000525957 ERFEQ4G0M1 354 aa20.66■□□□□ 0.9
ME3-204ENST00000525957 PRPF40BQ6NWY9 871 aaKnown RBP20.66■□□□□ 0.9
ME3-204ENST00000525957 NBPF5PQ86XG9 351 aaPredicted RBP20.66■□□□□ 0.9
ME3-204ENST00000525957 KLRG1Q96E93 195 aa20.66■□□□□ 0.9
ME3-204ENST00000525957 PDZRN3Q9UPQ7 1066 aa20.66■□□□□ 0.9
ME3-204ENST00000525957 ARFGEF2Q9Y6D5 1785 aa20.65■□□□□ 0.9
ME3-204ENST00000525957 FAM177BA6PVY3 158 aa20.65■□□□□ 0.9
ME3-204ENST00000525957 TAOK3Q9H2K8 898 aa20.65■□□□□ 0.9
ME3-204ENST00000525957 ZNF652Q9Y2D9 606 aa20.65■□□□□ 0.9
ME3-204ENST00000525957 DICER1Q9UPY3 1922 aaKnown RBP20.65■□□□□ 0.9
ME3-204ENST00000525957 LAMB4A4D0S4 1761 aa20.64■□□□□ 0.9
ME3-204ENST00000525957 CNKSR1Q969H4 720 aa20.64■□□□□ 0.89
ME3-204ENST00000525957 MIS18AQ9NYP9 233 aa20.64■□□□□ 0.89
ME3-204ENST00000525957 NBPF26B4DH59 902 aa20.63■□□□□ 0.89
ME3-204ENST00000525957 SRGNP10124 158 aa20.63■□□□□ 0.89
ME3-204ENST00000525957 STYK1Q6J9G0 422 aa20.63■□□□□ 0.89
ME3-204ENST00000525957 NBPF10Q6P3W6 841 aaKnown RBP20.63■□□□□ 0.89
ME3-204ENST00000525957 NBPF15Q8N660 670 aa20.63■□□□□ 0.89
ME3-204ENST00000525957 DLG5Q8TDM6 1919 aa20.63■□□□□ 0.89
ME3-204ENST00000525957 DPY19L2Q6NUT2 758 aa20.62■□□□□ 0.89
ME3-204ENST00000525957 MASTLQ96GX5 879 aa20.62■□□□□ 0.89
ME3-204ENST00000525957 NIP7Q9Y221 180 aaKnown RBP eCLIP20.62■□□□□ 0.89
ME3-204ENST00000525957 NEFMP07197 916 aa20.6■□□□□ 0.89
ME3-204ENST00000525957 NGEFQ8N5V2 710 aa20.6■□□□□ 0.89
ME3-204ENST00000525957 KDM3BQ7LBC6 1761 aa20.59■□□□□ 0.89
ME3-204ENST00000525957 LTBP3Q9NS15 1303 aa20.59■□□□□ 0.89
ME3-204ENST00000525957 POTECB2RU33 542 aa20.59■□□□□ 0.89
ME3-204ENST00000525957 HTATSF1O43719 755 aaKnown RBP20.59■□□□□ 0.89
ME3-204ENST00000525957 TAF7Q15545 349 aaPredicted RBP20.59■□□□□ 0.89
ME3-204ENST00000525957 CLEC4GQ6UXB4 293 aa20.59■□□□□ 0.89
ME3-204ENST00000525957 SOGA3Q5TF21 947 aa20.58■□□□□ 0.89
ME3-204ENST00000525957 THUMPD2Q9BTF0 503 aaKnown RBP20.58■□□□□ 0.89
ME3-204ENST00000525957 DDNO94850 711 aaPredicted RBP20.57■□□□□ 0.88
ME3-204ENST00000525957 HLFQ16534 295 aa20.57■□□□□ 0.88
ME3-204ENST00000525957 OLFM4Q6UX06 510 aa20.57■□□□□ 0.88
ME3-204ENST00000525957 JMYQ8N9B5 988 aa20.57■□□□□ 0.88
ME3-204ENST00000525957 NPR1P16066 1061 aa20.56■□□□□ 0.88
ME3-204ENST00000525957 CCDC93Q567U6 631 aa20.56■□□□□ 0.88
ME3-204ENST00000525957 TPTE2Q6XPS3 522 aa20.56■□□□□ 0.88
ME3-204ENST00000525957 GTF2E1P29083 439 aaPredicted RBP20.55■□□□□ 0.88
ME3-204ENST00000525957 POTEIP0CG38 1075 aa20.54■□□□□ 0.88
ME3-204ENST00000525957 POTEJP0CG39 1038 aa20.54■□□□□ 0.88
ME3-204ENST00000525957 ZNF277Q9NRM2 450 aaPredicted RBP20.54■□□□□ 0.88
ME3-204ENST00000525957 RRP7AQ9Y3A4 280 aaKnown RBP20.54■□□□□ 0.88
ME3-204ENST00000525957 ABCC12Q96J65 1359 aa20.54■□□□□ 0.88
ME3-204ENST00000525957 MYL6BP14649 208 aa20.53■□□□□ 0.88
ME3-204ENST00000525957 MAPK8IP3Q9UPT6 1336 aa20.53■□□□□ 0.88
ME3-204ENST00000525957 NFE2L2Q16236 605 aa20.52■□□□□ 0.88
ME3-204ENST00000525957 KIF6Q6ZMV9 814 aa20.52■□□□□ 0.88
ME3-204ENST00000525957 NUTM1Q86Y26 1132 aa20.52■□□□□ 0.88
ME3-204ENST00000525957 PNISRQ8TF01 805 aaKnown RBP20.52■□□□□ 0.88
ME3-204ENST00000525957 C7orf43Q8WVR3 580 aa20.52■□□□□ 0.88
ME3-204ENST00000525957 NUP98P52948 1817 aa20.52■□□□□ 0.88
ME3-204ENST00000525957 ZNF541Q9H0D2 1346 aa20.52■□□□□ 0.87
ME3-204ENST00000525957 GPTP24298 496 aa20.51■□□□□ 0.87
ME3-204ENST00000525957 FKBP4Q02790 459 aaKnown RBP eCLIP20.51■□□□□ 0.87
ME3-204ENST00000525957 COL13A1Q5TAT6 717 aaPredicted RBP20.51■□□□□ 0.87
ME3-204ENST00000525957 TTLL7Q6ZT98 887 aa20.51■□□□□ 0.87
ME3-204ENST00000525957 PLEKHF1Q96S99 279 aa20.51■□□□□ 0.87
ME3-204ENST00000525957 ZBTB3Q9H5J0 574 aa20.51■□□□□ 0.87
ME3-204ENST00000525957 EIF4A1P60842 406 aaKnown RBP20.5■□□□□ 0.87
ME3-204ENST00000525957 CHADLQ6NUI6 762 aa20.5■□□□□ 0.87
ME3-204ENST00000525957 MAP3K15Q6ZN16 1313 aa20.5■□□□□ 0.87
ME3-204ENST00000525957 KLRG2A4D1S0 409 aaPredicted RBP20.49■□□□□ 0.87
ME3-204ENST00000525957 RGL2O15211 777 aa20.49■□□□□ 0.87
ME3-204ENST00000525957 HSPA1AP0DMV8 641 aaKnown RBP20.48■□□□□ 0.87
ME3-204ENST00000525957 HSPA1BP0DMV9 641 aaKnown RBP20.48■□□□□ 0.87
ME3-204ENST00000525957 NYXQ9GZU5 481 aa20.48■□□□□ 0.87
ME3-204ENST00000525957 IQCA1LA6NCM1 817 aa20.47■□□□□ 0.87
ME3-204ENST00000525957 EAPPQ56P03 285 aaPredicted RBP20.47■□□□□ 0.87
ME3-204ENST00000525957 RTKN2Q8IZC4 609 aa20.47■□□□□ 0.87
ME3-204ENST00000525957 MKRN1Q9UHC7 482 aaKnown RBP20.47■□□□□ 0.87
ME3-204ENST00000525957 UBN2Q6ZU65 1347 aa20.47■□□□□ 0.87
ME3-204ENST00000525957 SCN4AP35499 1836 aa20.46■□□□□ 0.87
ME3-204ENST00000525957 CAPN15O75808 1086 aa20.46■□□□□ 0.87
ME3-204ENST00000525957 RPGRQ92834 1020 aaKnown RBP20.46■□□□□ 0.87
ME3-204ENST00000525957 TAF1DQ9H5J8 278 aaPredicted RBP20.46■□□□□ 0.87
ME3-204ENST00000525957 TSPYL4Q9UJ04 414 aa20.46■□□□□ 0.87
ME3-204ENST00000525957 ERVV-1B6SEH8 477 aa20.45■□□□□ 0.86
ME3-204ENST00000525957 ALDH1B1P30837 517 aa20.45■□□□□ 0.86
ME3-204ENST00000525957 IARSP41252 1262 aaKnown RBP20.45■□□□□ 0.86
ME3-204ENST00000525957 SLC51AQ86UW1 340 aa20.45■□□□□ 0.86
ME3-204ENST00000525957 SYNE4Q8N205 404 aa20.45■□□□□ 0.86
ME3-204ENST00000525957 PCNTO95613 3336 aa20.44■□□□□ 0.86
ME3-204ENST00000525957 TCERG1O14776 1098 aaKnown RBP20.44■□□□□ 0.86
ME3-204ENST00000525957 LDHDQ86WU2 507 aa20.44■□□□□ 0.86
ME3-204ENST00000525957 L3MBTL3Q96JM7 780 aaPredicted RBP20.44■□□□□ 0.86
ME3-204ENST00000525957 PNNQ9H307 717 aaKnown RBP20.44■□□□□ 0.86
ME3-204ENST00000525957 CREBZFQ9NS37 354 aa20.44■□□□□ 0.86
ME3-204ENST00000525957 RNF123Q5XPI4 1314 aa20.44■□□□□ 0.86
ME3-204ENST00000525957 EIF2S2P20042 333 aaKnown RBP20.43■□□□□ 0.86
ME3-204ENST00000525957 CRY2Q49AN0 593 aa20.43■□□□□ 0.86
ME3-204ENST00000525957 SUSD4Q5VX71 490 aa20.43■□□□□ 0.86
ME3-204ENST00000525957 TNS4Q8IZW8 715 aa20.43■□□□□ 0.86
ME3-204ENST00000525957 CLEC11AQ9Y240 323 aa20.43■□□□□ 0.86
ME3-204ENST00000525957 COL4A5P29400 1685 aa20.42■□□□□ 0.86
ME3-204ENST00000525957 ANXA1P04083 346 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms