RNA–Protein interactions for RNA: ENST00000525950.5

BDNF-213, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-213ENST00000525950 GJB2P29033 226 aa9.55□□□□□ -0.88
BDNF-213ENST00000525950 CHAF1AQ13111 956 aaPredicted RBP9.55□□□□□ -0.88
BDNF-213ENST00000525950 NUTM1Q86Y26 1132 aa9.55□□□□□ -0.88
BDNF-213ENST00000525950 IL1RAPL2Q9NP60 686 aa9.55□□□□□ -0.88
BDNF-213ENST00000525950 ZSCAN20P17040 1043 aaPredicted RBP9.54□□□□□ -0.88
BDNF-213ENST00000525950 RBM43Q6ZSC3 357 aaKnown RBP9.54□□□□□ -0.88
BDNF-213ENST00000525950 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.54□□□□□ -0.88
BDNF-213ENST00000525950 KCNF1Q9H3M0 494 aa9.54□□□□□ -0.88
BDNF-213ENST00000525950 PDRG1Q9NUG6 133 aa9.54□□□□□ -0.88
BDNF-213ENST00000525950 CYP46A1Q9Y6A2 500 aa9.54□□□□□ -0.88
BDNF-213ENST00000525950 PDCP20941 246 aa9.54□□□□□ -0.88
BDNF-213ENST00000525950 NECTIN1Q15223 517 aa9.54□□□□□ -0.88
BDNF-213ENST00000525950 IL17REQ8NFR9 667 aa9.54□□□□□ -0.88
BDNF-213ENST00000525950 HDAC5Q9UQL6 1122 aa9.54□□□□□ -0.88
BDNF-213ENST00000525950 DIP2BQ9P265 1576 aa9.54□□□□□ -0.88
BDNF-213ENST00000525950 CEMIPQ8WUJ3 1361 aa9.54□□□□□ -0.88
BDNF-213ENST00000525950 HIP1O00291 1037 aa9.54□□□□□ -0.88
BDNF-213ENST00000525950 AP5Z1O43299 807 aa9.54□□□□□ -0.88
BDNF-213ENST00000525950 GIMAP6Q6P9H5 292 aa9.54□□□□□ -0.88
BDNF-213ENST00000525950 BCL2L12Q9HB09 334 aa9.54□□□□□ -0.88
BDNF-213ENST00000525950 FIBPO43427 364 aa9.53□□□□□ -0.88
BDNF-213ENST00000525950 CAVIN2O95810 425 aa9.53□□□□□ -0.88
BDNF-213ENST00000525950 CASTP20810 708 aaKnown RBP9.53□□□□□ -0.88
BDNF-213ENST00000525950 DNM1Q05193 864 aaKnown RBP9.53□□□□□ -0.88
BDNF-213ENST00000525950 BEND3Q5T5X7 828 aa9.53□□□□□ -0.88
BDNF-213ENST00000525950 KRT85P78386 507 aa9.53□□□□□ -0.88
BDNF-213ENST00000525950 FOXD4L6Q3SYB3 417 aaPredicted RBP9.53□□□□□ -0.88
BDNF-213ENST00000525950 FOXD4L3Q6VB84 417 aaPredicted RBP9.53□□□□□ -0.88
BDNF-213ENST00000525950 TNRQ92752 1358 aa9.53□□□□□ -0.88
BDNF-213ENST00000525950 PIK3C2AO00443 1686 aa9.53□□□□□ -0.88
BDNF-213ENST00000525950 SRGAP3O43295 1099 aa9.53□□□□□ -0.88
BDNF-213ENST00000525950 AMPHP49418 695 aa9.53□□□□□ -0.88
BDNF-213ENST00000525950 MAP3K11Q16584 847 aa9.53□□□□□ -0.88
BDNF-213ENST00000525950 HDGFL1Q5TGJ6 251 aa9.53□□□□□ -0.88
BDNF-213ENST00000525950 ERC1Q8IUD2 1116 aa9.53□□□□□ -0.88
BDNF-213ENST00000525950 FEZ1Q99689 392 aa9.53□□□□□ -0.88
BDNF-213ENST00000525950 PSMA5P28066 241 aa9.52□□□□□ -0.88
BDNF-213ENST00000525950 ANKRD1Q15327 319 aa9.52□□□□□ -0.88
BDNF-213ENST00000525950 EVI5LQ96CN4 794 aa9.52□□□□□ -0.88
BDNF-213ENST00000525950 DDX19AQ9NUU7 478 aaKnown RBP9.52□□□□□ -0.88
BDNF-213ENST00000525950 GIGYF1O75420 1035 aaPredicted RBP9.52□□□□□ -0.89
BDNF-213ENST00000525950 KIF20AO95235 890 aa9.52□□□□□ -0.89
BDNF-213ENST00000525950 LARGE1O95461 756 aa9.52□□□□□ -0.89
BDNF-213ENST00000525950 ST3GAL1Q11201 340 aa9.52□□□□□ -0.89
BDNF-213ENST00000525950 CCDC83Q8IWF9 413 aa9.52□□□□□ -0.89
BDNF-213ENST00000525950 GPATCH3Q96I76 525 aa9.52□□□□□ -0.89
BDNF-213ENST00000525950 SCAND2PQ9GZW5 306 aaPredicted RBP9.52□□□□□ -0.89
BDNF-213ENST00000525950 ECHDC1Q9NTX5 307 aa9.52□□□□□ -0.89
BDNF-213ENST00000525950 PYCARDQ9ULZ3 195 aa9.52□□□□□ -0.89
BDNF-213ENST00000525950 ZKSCAN1P17029 563 aaPredicted RBP9.52□□□□□ -0.89
BDNF-213ENST00000525950 CWC27Q6UX04 472 aaKnown RBP9.52□□□□□ -0.89
BDNF-213ENST00000525950 KDM3BQ7LBC6 1761 aa9.52□□□□□ -0.89
BDNF-213ENST00000525950 TSGA10IPQ3SY00 556 aa9.51□□□□□ -0.89
BDNF-213ENST00000525950 CLASRPQ8N2M8 674 aaKnown RBP9.51□□□□□ -0.89
BDNF-213ENST00000525950 DNAAF4Q8WXU2 420 aa9.51□□□□□ -0.89
BDNF-213ENST00000525950 MAP4K1Q92918 833 aa9.51□□□□□ -0.89
BDNF-213ENST00000525950 JAKMIP1Q96N16 626 aaKnown RBP9.51□□□□□ -0.89
BDNF-213ENST00000525950 NUP62CLQ9H1M0 184 aa9.51□□□□□ -0.89
BDNF-213ENST00000525950 MRVI1Q9Y6F6 885 aa9.51□□□□□ -0.89
BDNF-213ENST00000525950 ANKARQ7Z5J8 1434 aa9.51□□□□□ -0.89
BDNF-213ENST00000525950 RIOK3O14730 519 aaKnown RBP9.51□□□□□ -0.89
BDNF-213ENST00000525950 ALDH1L1O75891 902 aa9.51□□□□□ -0.89
BDNF-213ENST00000525950 CDC25BP30305 580 aa9.51□□□□□ -0.89
BDNF-213ENST00000525950 PDCL2Q8N4E4 241 aa9.51□□□□□ -0.89
BDNF-213ENST00000525950 TDRD7Q8NHU6 1098 aaKnown RBP9.51□□□□□ -0.89
BDNF-213ENST00000525950 JCADQ9P266 1359 aa9.51□□□□□ -0.89
BDNF-213ENST00000525950 HOXC9P31274 260 aa9.51□□□□□ -0.89
BDNF-213ENST00000525950 TYRO3Q06418 890 aa9.51□□□□□ -0.89
BDNF-213ENST00000525950 ME3Q16798 604 aa9.51□□□□□ -0.89
BDNF-213ENST00000525950 PLA2G4DQ86XP0 818 aa9.51□□□□□ -0.89
BDNF-213ENST00000525950 MARF1Q9Y4F3 1742 aaKnown RBP9.51□□□□□ -0.89
BDNF-213ENST00000525950 NPHP3Q7Z494 1330 aa9.5□□□□□ -0.89
BDNF-213ENST00000525950 EIF4A1P60842 406 aaKnown RBP9.5□□□□□ -0.89
BDNF-213ENST00000525950 PTH1RQ03431 593 aa9.5□□□□□ -0.89
BDNF-213ENST00000525950 PPP4R3BQ5MIZ7 849 aa9.5□□□□□ -0.89
BDNF-213ENST00000525950 TTC6Q86TZ1 520 aa9.5□□□□□ -0.89
BDNF-213ENST00000525950 PHAXQ9H814 394 aaKnown RBP9.5□□□□□ -0.89
BDNF-213ENST00000525950 SPG7Q9UQ90 795 aa9.5□□□□□ -0.89
BDNF-213ENST00000525950 MAP4K4O95819 1239 aaPredicted RBP9.5□□□□□ -0.89
BDNF-213ENST00000525950 LARP1BQ659C4 914 aaKnown RBP9.5□□□□□ -0.89
BDNF-213ENST00000525950 C17orf53Q8N3J3 647 aaPredicted RBP9.5□□□□□ -0.89
BDNF-213ENST00000525950 SMTNL1A8MU46 457 aa9.5□□□□□ -0.89
BDNF-213ENST00000525950 NBPF7P0C2Y1 421 aaPredicted RBP9.5□□□□□ -0.89
BDNF-213ENST00000525950 ADCK5Q3MIX3 580 aa9.5□□□□□ -0.89
BDNF-213ENST00000525950 PRPF40BQ6NWY9 871 aaKnown RBP9.5□□□□□ -0.89
BDNF-213ENST00000525950 PAXBP1Q9Y5B6 917 aa9.5□□□□□ -0.89
BDNF-213ENST00000525950 CREB3L3Q68CJ9 461 aa9.49□□□□□ -0.89
BDNF-213ENST00000525950 CLSTN2Q9H4D0 955 aa9.49□□□□□ -0.89
BDNF-213ENST00000525950 HMG20BQ9P0W2 317 aa9.49□□□□□ -0.89
BDNF-213ENST00000525950 TPCN1Q9ULQ1 816 aa9.49□□□□□ -0.89
BDNF-213ENST00000525950 SLIT1O75093 1534 aa9.49□□□□□ -0.89
BDNF-213ENST00000525950 RNF20Q5VTR2 975 aa9.49□□□□□ -0.89
BDNF-213ENST00000525950 RBM8AQ9Y5S9 174 aaKnown RBP9.49□□□□□ -0.89
BDNF-213ENST00000525950 TSPOAP1O95153 1857 aa9.49□□□□□ -0.89
BDNF-213ENST00000525950 OVOS2A0A0G2JMS6 1433 aa9.48□□□□□ -0.89
BDNF-213ENST00000525950 NEMFO60524 1076 aa9.48□□□□□ -0.89
BDNF-213ENST00000525950 ZNF75DP51815 510 aa9.48□□□□□ -0.89
BDNF-213ENST00000525950 ATP2B3Q16720 1220 aa9.48□□□□□ -0.89
BDNF-213ENST00000525950 SARM1Q6SZW1 724 aa9.48□□□□□ -0.89
BDNF-213ENST00000525950 UTYO14607 1347 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms