RNA–Protein interactions for RNA: ENST00000525530.1

PPFIA1-203, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 2

Gene PPFIA1, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-203ENST00000525530 POM121CA8CG34 1229 aa9.48□□□□□ -0.89
PPFIA1-203ENST00000525530 PIK3R2O00459 728 aa9.48□□□□□ -0.89
PPFIA1-203ENST00000525530 UCN2Q96RP3 112 aa9.48□□□□□ -0.89
PPFIA1-203ENST00000525530 BICDL1Q6ZP65 573 aa9.47□□□□□ -0.89
PPFIA1-203ENST00000525530 C14orf37Q86TY3 774 aa9.47□□□□□ -0.89
PPFIA1-203ENST00000525530 NOP53Q9NZM5 478 aaKnown RBP9.47□□□□□ -0.89
PPFIA1-203ENST00000525530 ELOA3CA0A087WX78 387 aaPredicted RBP9.46□□□□□ -0.9
PPFIA1-203ENST00000525530 ELOA3DA6NLF2 546 aaPredicted RBP9.46□□□□□ -0.9
PPFIA1-203ENST00000525530 ELOA3BQ3SY89 546 aa9.46□□□□□ -0.9
PPFIA1-203ENST00000525530 LRRC69Q6ZNQ3 347 aa9.46□□□□□ -0.9
PPFIA1-203ENST00000525530 SYT9Q86SS6 491 aa9.46□□□□□ -0.9
PPFIA1-203ENST00000525530 ELOA3Q8NG57 546 aa9.46□□□□□ -0.9
PPFIA1-203ENST00000525530 SLC30A3Q99726 388 aa9.46□□□□□ -0.9
PPFIA1-203ENST00000525530 A6NJR5 290 aa9.45□□□□□ -0.9
PPFIA1-203ENST00000525530 DKK1O94907 266 aa9.45□□□□□ -0.9
PPFIA1-203ENST00000525530 CLDN10P78369 228 aa9.45□□□□□ -0.9
PPFIA1-203ENST00000525530 SFSWAPQ12872 951 aaKnown RBP9.45□□□□□ -0.9
PPFIA1-203ENST00000525530 PLEKHM2Q8IWE5 1019 aa9.45□□□□□ -0.9
PPFIA1-203ENST00000525530 PLVAPQ9BX97 442 aa9.45□□□□□ -0.9
PPFIA1-203ENST00000525530 TIMELESSQ9UNS1 1208 aa9.45□□□□□ -0.9
PPFIA1-203ENST00000525530 STARD13Q9Y3M8 1113 aa9.45□□□□□ -0.9
PPFIA1-203ENST00000525530 GJA3Q9Y6H8 435 aa9.45□□□□□ -0.9
PPFIA1-203ENST00000525530 RAD21O60216 631 aa9.44□□□□□ -0.9
PPFIA1-203ENST00000525530 PRR12Q9ULL5 1215 aa9.44□□□□□ -0.9
PPFIA1-203ENST00000525530 GPC6Q9Y625 555 aaPredicted RBP9.44□□□□□ -0.9
PPFIA1-203ENST00000525530 ADARB2-AS1A8MUL3 147 aa9.43□□□□□ -0.9
PPFIA1-203ENST00000525530 SIN3BO75182 1162 aa9.43□□□□□ -0.9
PPFIA1-203ENST00000525530 PSME1Q06323 249 aa9.43□□□□□ -0.9
PPFIA1-203ENST00000525530 Q8N3U1 123 aa9.43□□□□□ -0.9
PPFIA1-203ENST00000525530 CLUAP1Q96AJ1 413 aa9.43□□□□□ -0.9
PPFIA1-203ENST00000525530 HIRAP54198 1017 aaPredicted RBP9.42□□□□□ -0.9
PPFIA1-203ENST00000525530 TPCN2Q8NHX9 752 aa9.42□□□□□ -0.9
PPFIA1-203ENST00000525530 TNFRSF25Q93038 417 aa9.42□□□□□ -0.9
PPFIA1-203ENST00000525530 ZMYND15Q9H091 742 aa9.42□□□□□ -0.9
PPFIA1-203ENST00000525530 TSPAN10Q9H1Z9 355 aaPredicted RBP9.42□□□□□ -0.9
PPFIA1-203ENST00000525530 SERTM1A2A2V5 107 aa9.41□□□□□ -0.9
PPFIA1-203ENST00000525530 USP17L3A6NCW0 530 aa9.41□□□□□ -0.9
PPFIA1-203ENST00000525530 USP17L4A6NCW7 530 aa9.41□□□□□ -0.9
PPFIA1-203ENST00000525530 USP17L2Q6R6M4 530 aa9.41□□□□□ -0.9
PPFIA1-203ENST00000525530 USP17L1Q7RTZ2 530 aa9.41□□□□□ -0.9
PPFIA1-203ENST00000525530 C21orf2O43822 256 aa9.4□□□□□ -0.9
PPFIA1-203ENST00000525530 SPATA31C1P0DKV0 1188 aa9.4□□□□□ -0.9
PPFIA1-203ENST00000525530 DOC2BQ14184 412 aa9.4□□□□□ -0.9
PPFIA1-203ENST00000525530 CCDC102BQ68D86 513 aa9.4□□□□□ -0.9
PPFIA1-203ENST00000525530 FNBP4Q8N3X1 1017 aaPredicted RBP9.4□□□□□ -0.9
PPFIA1-203ENST00000525530 HSH2DQ96JZ2 352 aa9.4□□□□□ -0.9
PPFIA1-203ENST00000525530 KCNQ4P56696 695 aa9.39□□□□□ -0.91
PPFIA1-203ENST00000525530 C1orf53Q5VUE5 145 aa9.39□□□□□ -0.91
PPFIA1-203ENST00000525530 PROSER2Q86WR7 435 aaPredicted RBP9.39□□□□□ -0.91
PPFIA1-203ENST00000525530 PRDM6Q9NQX0 595 aa9.39□□□□□ -0.91
PPFIA1-203ENST00000525530 ZNF232Q9UNY5 417 aa9.39□□□□□ -0.91
PPFIA1-203ENST00000525530 M0R2N6 131 aa9.38□□□□□ -0.91
PPFIA1-203ENST00000525530 ALBP02768 609 aa9.38□□□□□ -0.91
PPFIA1-203ENST00000525530 PSMA6P60900 246 aaKnown RBP9.38□□□□□ -0.91
PPFIA1-203ENST00000525530 C8orf86Q6ZUL3 223 aa9.38□□□□□ -0.91
PPFIA1-203ENST00000525530 TRIM50Q86XT4 487 aa9.38□□□□□ -0.91
PPFIA1-203ENST00000525530 ZNF280CQ8ND82 737 aa9.38□□□□□ -0.91
PPFIA1-203ENST00000525530 ATP9BO43861 1147 aa9.37□□□□□ -0.91
PPFIA1-203ENST00000525530 SPEM2Q0P670 501 aa9.37□□□□□ -0.91
PPFIA1-203ENST00000525530 C20orf204Q6ZNR8 217 aa9.37□□□□□ -0.91
PPFIA1-203ENST00000525530 RAB44Q7Z6P3 723 aaPredicted RBP9.37□□□□□ -0.91
PPFIA1-203ENST00000525530 WWC1Q8IX03 1113 aa9.37□□□□□ -0.91
PPFIA1-203ENST00000525530 SIX5Q8N196 739 aa9.37□□□□□ -0.91
PPFIA1-203ENST00000525530 MICALL1Q8N3F8 863 aa9.37□□□□□ -0.91
PPFIA1-203ENST00000525530 RHPN1Q8TCX5 695 aa9.37□□□□□ -0.91
PPFIA1-203ENST00000525530 HCN4Q9Y3Q4 1203 aa9.37□□□□□ -0.91
PPFIA1-203ENST00000525530 ABCC9O60706 1549 aa9.36□□□□□ -0.91
PPFIA1-203ENST00000525530 M0R082 166 aa9.36□□□□□ -0.91
PPFIA1-203ENST00000525530 NID1P14543 1247 aa9.36□□□□□ -0.91
PPFIA1-203ENST00000525530 TYRO3Q06418 890 aa9.36□□□□□ -0.91
PPFIA1-203ENST00000525530 HDGFL1Q5TGJ6 251 aa9.36□□□□□ -0.91
PPFIA1-203ENST00000525530 OGFOD1Q8N543 542 aa9.36□□□□□ -0.91
PPFIA1-203ENST00000525530 ZNF417Q8TAU3 575 aa9.36□□□□□ -0.91
PPFIA1-203ENST00000525530 ZNF587Q96SQ5 575 aaPredicted RBP9.36□□□□□ -0.91
PPFIA1-203ENST00000525530 PHACTR1Q9C0D0 580 aa9.36□□□□□ -0.91
PPFIA1-203ENST00000525530 GATA4P43694 442 aa9.35□□□□□ -0.91
PPFIA1-203ENST00000525530 RSPO4Q2I0M5 234 aaPredicted RBP9.35□□□□□ -0.91
PPFIA1-203ENST00000525530 NKAPLQ5M9Q1 402 aa9.35□□□□□ -0.91
PPFIA1-203ENST00000525530 LARGE2Q8N3Y3 721 aa9.35□□□□□ -0.91
PPFIA1-203ENST00000525530 TSEN2Q8NCE0 465 aaKnown RBP9.35□□□□□ -0.91
PPFIA1-203ENST00000525530 KRTAP4-8Q9BYQ9 185 aa9.35□□□□□ -0.91
PPFIA1-203ENST00000525530 BRD7Q9NPI1 651 aa9.35□□□□□ -0.91
PPFIA1-203ENST00000525530 FAM229AH3BQW9 127 aa9.34□□□□□ -0.91
PPFIA1-203ENST00000525530 ALAS2P22557 587 aa9.34□□□□□ -0.91
PPFIA1-203ENST00000525530 ATP1A2P50993 1020 aa9.34□□□□□ -0.91
PPFIA1-203ENST00000525530 SUSD3Q96L08 255 aa9.34□□□□□ -0.91
PPFIA1-203ENST00000525530 SEMA6BQ9H3T3 888 aa9.34□□□□□ -0.91
PPFIA1-203ENST00000525530 MKRN1Q9UHC7 482 aaKnown RBP9.34□□□□□ -0.91
PPFIA1-203ENST00000525530 SFI1A8K8P3 1242 aa9.33□□□□□ -0.92
PPFIA1-203ENST00000525530 ADH7P40394 386 aa9.33□□□□□ -0.92
PPFIA1-203ENST00000525530 PALM3A6NDB9 673 aaPredicted RBP9.32□□□□□ -0.92
PPFIA1-203ENST00000525530 FOXD4L6Q3SYB3 417 aaPredicted RBP9.32□□□□□ -0.92
PPFIA1-203ENST00000525530 FOXD4L3Q6VB84 417 aaPredicted RBP9.32□□□□□ -0.92
PPFIA1-203ENST00000525530 ILDR2Q71H61 639 aa9.32□□□□□ -0.92
PPFIA1-203ENST00000525530 CEP63Q96MT8 703 aa9.32□□□□□ -0.92
PPFIA1-203ENST00000525530 TPSG1Q9NRR2 321 aa9.32□□□□□ -0.92
PPFIA1-203ENST00000525530 STAG2Q8N3U4 1231 aa9.31□□□□□ -0.92
PPFIA1-203ENST00000525530 C2orf49Q9BVC5 232 aaPredicted RBP9.31□□□□□ -0.92
PPFIA1-203ENST00000525530 NEUROD4Q9HD90 331 aa9.31□□□□□ -0.92
PPFIA1-203ENST00000525530 KCNH4Q9UQ05 1017 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms