RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-216ENST00000525506 ADAMTS8Q9UP79 889 aa13.75□□□□□ -0.21
RBBP4-216ENST00000525506 H0YIN7 160 aa13.74□□□□□ -0.21
RBBP4-216ENST00000525506 RASSF7Q02833 373 aa13.74□□□□□ -0.21
RBBP4-216ENST00000525506 HLFQ16534 295 aa13.74□□□□□ -0.21
RBBP4-216ENST00000525506 ZNF622Q969S3 477 aaKnown RBP eCLIP13.74□□□□□ -0.213e-23■□□□□ 8.3
RBBP4-216ENST00000525506 SLX4Q8IY92 1834 aa13.74□□□□□ -0.21
RBBP4-216ENST00000525506 FAM177BA6PVY3 158 aa13.73□□□□□ -0.21
RBBP4-216ENST00000525506 NPHP1O15259 732 aa13.73□□□□□ -0.21
RBBP4-216ENST00000525506 TTLL6Q8N841 843 aa13.73□□□□□ -0.21
RBBP4-216ENST00000525506 CNBD1Q8NA66 436 aa13.73□□□□□ -0.21
RBBP4-216ENST00000525506 BRIP1Q9BX63 1249 aa13.73□□□□□ -0.21
RBBP4-216ENST00000525506 RNF181Q9P0P0 153 aa13.73□□□□□ -0.21
RBBP4-216ENST00000525506 ZNF219Q9P2Y4 722 aaPredicted RBP13.73□□□□□ -0.21
RBBP4-216ENST00000525506 TSPYL4Q9UJ04 414 aa13.73□□□□□ -0.21
RBBP4-216ENST00000525506 MYL6BP14649 208 aa13.72□□□□□ -0.21
RBBP4-216ENST00000525506 KIF3CO14782 793 aa13.71□□□□□ -0.21
RBBP4-216ENST00000525506 PDE6BP35913 854 aa13.71□□□□□ -0.21
RBBP4-216ENST00000525506 PRELPP51888 382 aa13.71□□□□□ -0.21
RBBP4-216ENST00000525506 CLEC4GQ6UXB4 293 aa13.71□□□□□ -0.21
RBBP4-216ENST00000525506 TTLL7Q6ZT98 887 aa13.71□□□□□ -0.21
RBBP4-216ENST00000525506 NBPF5PQ86XG9 351 aaPredicted RBP13.71□□□□□ -0.21
RBBP4-216ENST00000525506 NIP7Q9Y221 180 aaKnown RBP eCLIP13.71□□□□□ -0.21
RBBP4-216ENST00000525506 ZNF652Q9Y2D9 606 aa13.71□□□□□ -0.21
RBBP4-216ENST00000525506 FER1L6Q2WGJ9 1857 aa13.7□□□□□ -0.22
RBBP4-216ENST00000525506 ST5P78524 1137 aa13.7□□□□□ -0.22
RBBP4-216ENST00000525506 NCBP3Q53F19 620 aaKnown RBP13.7□□□□□ -0.22
RBBP4-216ENST00000525506 NMRK2Q9NPI5 230 aa13.7□□□□□ -0.22
RBBP4-216ENST00000525506 ARFGEF2Q9Y6D5 1785 aa13.69□□□□□ -0.22
RBBP4-216ENST00000525506 C21orf2O43822 256 aa13.69□□□□□ -0.22
RBBP4-216ENST00000525506 ANXA1P04083 346 aa13.69□□□□□ -0.22
RBBP4-216ENST00000525506 EIF2S2P20042 333 aaKnown RBP13.69□□□□□ -0.22
RBBP4-216ENST00000525506 NECTIN2Q92692 538 aa13.69□□□□□ -0.22
RBBP4-216ENST00000525506 TRIM35Q9UPQ4 493 aa13.69□□□□□ -0.22
RBBP4-216ENST00000525506 LAS1LQ9Y4W2 734 aaKnown RBP13.69□□□□□ -0.22
RBBP4-216ENST00000525506 DICER1Q9UPY3 1922 aaKnown RBP13.68□□□□□ -0.22
RBBP4-216ENST00000525506 NFKBIEO00221 500 aa13.68□□□□□ -0.22
RBBP4-216ENST00000525506 SRGNP10124 158 aa13.68□□□□□ -0.22
RBBP4-216ENST00000525506 KRT24Q2M2I5 525 aa13.68□□□□□ -0.22
RBBP4-216ENST00000525506 ZBTB3Q9H5J0 574 aa13.68□□□□□ -0.22
RBBP4-216ENST00000525506 MRS2Q9HD23 443 aa13.68□□□□□ -0.22
RBBP4-216ENST00000525506 TIAM2Q8IVF5 1701 aa13.67□□□□□ -0.22
RBBP4-216ENST00000525506 MAP3K15Q6ZN16 1313 aa13.67□□□□□ -0.22
RBBP4-216ENST00000525506 RGL2O15211 777 aa13.67□□□□□ -0.22
RBBP4-216ENST00000525506 GPTP24298 496 aa13.67□□□□□ -0.22
RBBP4-216ENST00000525506 CALD1Q05682 793 aaKnown RBP13.67□□□□□ -0.22
RBBP4-216ENST00000525506 PROSER3Q2NL68 480 aa13.67□□□□□ -0.22
RBBP4-216ENST00000525506 TNRC6CQ9HCJ0 1690 aaKnown RBP13.66□□□□□ -0.22
RBBP4-216ENST00000525506 PDIA6Q15084 440 aa13.66□□□□□ -0.22
RBBP4-216ENST00000525506 CCDC184Q52MB2 194 aa13.66□□□□□ -0.22
RBBP4-216ENST00000525506 STYK1Q6J9G0 422 aa13.66□□□□□ -0.22
RBBP4-216ENST00000525506 PRPF40BQ6NWY9 871 aaKnown RBP13.66□□□□□ -0.22
RBBP4-216ENST00000525506 TPTE2Q6XPS3 522 aa13.66□□□□□ -0.22
RBBP4-216ENST00000525506 KIF6Q6ZMV9 814 aa13.66□□□□□ -0.22
RBBP4-216ENST00000525506 NUTM1Q86Y26 1132 aa13.66□□□□□ -0.22
RBBP4-216ENST00000525506 MASTLQ96GX5 879 aa13.66□□□□□ -0.22
RBBP4-216ENST00000525506 PDZRN3Q9UPQ7 1066 aa13.66□□□□□ -0.22
RBBP4-216ENST00000525506 ERVV-1B6SEH8 477 aa13.65□□□□□ -0.22
RBBP4-216ENST00000525506 CHL1O00533 1208 aa13.65□□□□□ -0.22
RBBP4-216ENST00000525506 LMNB1P20700 586 aa13.65□□□□□ -0.22
RBBP4-216ENST00000525506 CCDC27Q2M243 656 aa13.65□□□□□ -0.22
RBBP4-216ENST00000525506 LRP10Q7Z4F1 713 aa13.65□□□□□ -0.22
RBBP4-216ENST00000525506 CNKSR1Q969H4 720 aa13.65□□□□□ -0.22
RBBP4-216ENST00000525506 ERBB4Q15303 1308 aa13.64□□□□□ -0.23
RBBP4-216ENST00000525506 UBN2Q6ZU65 1347 aa13.64□□□□□ -0.23
RBBP4-216ENST00000525506 ABCC12Q96J65 1359 aa13.64□□□□□ -0.23
RBBP4-216ENST00000525506 APAF1O14727 1248 aa13.64□□□□□ -0.23
RBBP4-216ENST00000525506 GTF2E1P29083 439 aaPredicted RBP13.64□□□□□ -0.23
RBBP4-216ENST00000525506 ERFEQ4G0M1 354 aa13.64□□□□□ -0.23
RBBP4-216ENST00000525506 OLFM4Q6UX06 510 aa13.64□□□□□ -0.23
RBBP4-216ENST00000525506 RRAGCQ9HB90 399 aa13.64□□□□□ -0.23
RBBP4-216ENST00000525506 CEP350Q5VT06 3117 aa13.64□□□□□ -0.23
RBBP4-216ENST00000525506 KLRG2A4D1S0 409 aaPredicted RBP13.63□□□□□ -0.23
RBBP4-216ENST00000525506 NPR1P16066 1061 aa13.63□□□□□ -0.23
RBBP4-216ENST00000525506 SUSD4Q5VX71 490 aa13.63□□□□□ -0.23
RBBP4-216ENST00000525506 CFAP44Q96MT7 982 aa13.63□□□□□ -0.23
RBBP4-216ENST00000525506 ANKRD36CQ5JPF3 1778 aa13.63□□□□□ -0.23
RBBP4-216ENST00000525506 KDM2BQ8NHM5 1336 aa13.63□□□□□ -0.23
RBBP4-216ENST00000525506 HOXB7P09629 217 aa13.62□□□□□ -0.23
RBBP4-216ENST00000525506 HSPA6P17066 643 aa13.62□□□□□ -0.23
RBBP4-216ENST00000525506 AIMP1Q12904 312 aaKnown RBP13.62□□□□□ -0.23
RBBP4-216ENST00000525506 GIGYF2Q6Y7W6 1299 aaKnown RBP13.62□□□□□ -0.23
RBBP4-216ENST00000525506 ZNF34Q8IZ26 560 aa13.62□□□□□ -0.23
RBBP4-216ENST00000525506 ZNF428Q96B54 188 aa13.62□□□□□ -0.23
RBBP4-216ENST00000525506 IFT57Q9NWB7 429 aa13.62□□□□□ -0.23
RBBP4-216ENST00000525506 TOMM70O94826 608 aa13.61□□□□□ -0.23
RBBP4-216ENST00000525506 ZNF853P0CG23 659 aa13.61□□□□□ -0.23
RBBP4-216ENST00000525506 COPS6Q7L5N1 327 aa13.61□□□□□ -0.23
RBBP4-216ENST00000525506 XAGE3Q8WTP9 111 aa13.61□□□□□ -0.23
RBBP4-216ENST00000525506 C7orf43Q8WVR3 580 aa13.61□□□□□ -0.23
RBBP4-216ENST00000525506 NYXQ9GZU5 481 aa13.61□□□□□ -0.23
RBBP4-216ENST00000525506 LAMB2P55268 1798 aa13.6□□□□□ -0.23
RBBP4-216ENST00000525506 GLTPD2A6NH11 291 aa13.6□□□□□ -0.23
RBBP4-216ENST00000525506 NTSR2O95665 410 aa13.6□□□□□ -0.23
RBBP4-216ENST00000525506 C3orf67Q6ZVT6 689 aa13.6□□□□□ -0.23
RBBP4-216ENST00000525506 SLC51AQ86UW1 340 aa13.6□□□□□ -0.23
RBBP4-216ENST00000525506 C16orf71Q8IYS4 520 aaPredicted RBP13.6□□□□□ -0.23
RBBP4-216ENST00000525506 TAOK3Q9H2K8 898 aa13.6□□□□□ -0.23
RBBP4-216ENST00000525506 MBIPQ9NS73 344 aa13.6□□□□□ -0.23
RBBP4-216ENST00000525506 CHPF2Q9P2E5 772 aa13.6□□□□□ -0.23
RBBP4-216ENST00000525506 TAF1P21675 1872 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms