RNA–Protein interactions for RNA: ENST00000525504.5

CCDC90B-204, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-204ENST00000525504 NRAPQ86VF7 1730 aa8.34□□□□□ -1.07
CCDC90B-204ENST00000525504 ABCA3Q99758 1704 aa8.34□□□□□ -1.07
CCDC90B-204ENST00000525504 THSD7AQ9UPZ6 1657 aa8.34□□□□□ -1.07
CCDC90B-204ENST00000525504 ZBTB7CA1YPR0 619 aa8.34□□□□□ -1.07
CCDC90B-204ENST00000525504 EXOC5O00471 708 aa8.34□□□□□ -1.07
CCDC90B-204ENST00000525504 TMF1P82094 1093 aa8.34□□□□□ -1.07
CCDC90B-204ENST00000525504 SPRYD3Q8NCJ5 442 aa8.34□□□□□ -1.07
CCDC90B-204ENST00000525504 IP6K1Q92551 441 aa8.34□□□□□ -1.07
CCDC90B-204ENST00000525504 EYA1Q99502 592 aa8.34□□□□□ -1.07
CCDC90B-204ENST00000525504 CRYBG1Q9Y4K1 1723 aa8.34□□□□□ -1.07
CCDC90B-204ENST00000525504 PLCH1Q4KWH8 1693 aa8.34□□□□□ -1.08
CCDC90B-204ENST00000525504 LMO7Q8WWI1 1683 aa8.34□□□□□ -1.08
CCDC90B-204ENST00000525504 FYB1O15117 783 aa8.33□□□□□ -1.08
CCDC90B-204ENST00000525504 NR1I2O75469 434 aa8.33□□□□□ -1.08
CCDC90B-204ENST00000525504 CD2BP2O95400 341 aaKnown RBP8.33□□□□□ -1.08
CCDC90B-204ENST00000525504 CSB-PGBD3P0DP91 1061 aa8.33□□□□□ -1.08
CCDC90B-204ENST00000525504 ITSN1Q15811 1721 aa8.33□□□□□ -1.08
CCDC90B-204ENST00000525504 CDCA8Q53HL2 280 aa8.33□□□□□ -1.08
CCDC90B-204ENST00000525504 NPAS3Q8IXF0 933 aa8.33□□□□□ -1.08
CCDC90B-204ENST00000525504 CCDC7Q96M83 1385 aa8.33□□□□□ -1.08
CCDC90B-204ENST00000525504 PADI6Q6TGC4 694 aa8.32□□□□□ -1.08
CCDC90B-204ENST00000525504 PAXIP1Q6ZW49 1069 aaPredicted RBP8.32□□□□□ -1.08
CCDC90B-204ENST00000525504 PTF1AQ7RTS3 328 aa8.32□□□□□ -1.08
CCDC90B-204ENST00000525504 NFAT5O94916 1531 aa8.32□□□□□ -1.08
CCDC90B-204ENST00000525504 ANKRD36BQ8N2N9 1353 aa8.32□□□□□ -1.08
CCDC90B-204ENST00000525504 USP47Q96K76 1375 aa8.32□□□□□ -1.08
CCDC90B-204ENST00000525504 OVOS2A0A0J9YW53 1432 aa8.31□□□□□ -1.08
CCDC90B-204ENST00000525504 OVOS2Q6IE36 1432 aa8.31□□□□□ -1.08
CCDC90B-204ENST00000525504 GRXCR2A6NFK2 248 aa8.31□□□□□ -1.08
CCDC90B-204ENST00000525504 GMPRP36959 345 aa8.31□□□□□ -1.08
CCDC90B-204ENST00000525504 R3HDM1Q15032 1099 aaKnown RBP8.31□□□□□ -1.08
CCDC90B-204ENST00000525504 ANKRD24Q8TF21 1146 aa8.31□□□□□ -1.08
CCDC90B-204ENST00000525504 IRF7Q92985 503 aa8.31□□□□□ -1.08
CCDC90B-204ENST00000525504 COG3Q96JB2 828 aa8.31□□□□□ -1.08
CCDC90B-204ENST00000525504 CFAP44Q96MT7 982 aa8.31□□□□□ -1.08
CCDC90B-204ENST00000525504 CARD14Q9BXL6 1004 aa8.31□□□□□ -1.08
CCDC90B-204ENST00000525504 NLRP2Q9NX02 1062 aa8.31□□□□□ -1.08
CCDC90B-204ENST00000525504 QRICH2Q9H0J4 1663 aa8.3□□□□□ -1.08
CCDC90B-204ENST00000525504 MAP3K19Q56UN5 1328 aa8.3□□□□□ -1.08
CCDC90B-204ENST00000525504 OVOS2A0A0G2JMS6 1433 aa8.3□□□□□ -1.08
CCDC90B-204ENST00000525504 PHRF1Q9P1Y6 1649 aaKnown RBP8.3□□□□□ -1.08
CCDC90B-204ENST00000525504 IL2RBP14784 551 aa8.3□□□□□ -1.08
CCDC90B-204ENST00000525504 FBLN1P23142 703 aa8.3□□□□□ -1.08
CCDC90B-204ENST00000525504 NBPF14Q5TI25 921 aa8.3□□□□□ -1.08
CCDC90B-204ENST00000525504 PCGF6Q9BYE7 350 aa8.3□□□□□ -1.08
CCDC90B-204ENST00000525504 NXF1Q9UBU9 619 aaKnown RBP8.3□□□□□ -1.08
CCDC90B-204ENST00000525504 ABCC6O95255 1503 aa8.29□□□□□ -1.08
CCDC90B-204ENST00000525504 TTC24A2A3L6 582 aaPredicted RBP8.29□□□□□ -1.08
CCDC90B-204ENST00000525504 HOXC9P31274 260 aa8.29□□□□□ -1.08
CCDC90B-204ENST00000525504 PIK3C2AO00443 1686 aa8.28□□□□□ -1.08
CCDC90B-204ENST00000525504 KCNQ2O43526 872 aa8.28□□□□□ -1.08
CCDC90B-204ENST00000525504 OSBPP22059 807 aa8.28□□□□□ -1.08
CCDC90B-204ENST00000525504 COL18A1P39060 1754 aa8.27□□□□□ -1.08
CCDC90B-204ENST00000525504 BRWD3Q6RI45 1802 aa8.27□□□□□ -1.09
CCDC90B-204ENST00000525504 AMPHP49418 695 aa8.27□□□□□ -1.09
CCDC90B-204ENST00000525504 GGNBP2Q9H3C7 697 aa8.27□□□□□ -1.09
CCDC90B-204ENST00000525504 NPDC1Q9NQX5 325 aaPredicted RBP8.27□□□□□ -1.09
CCDC90B-204ENST00000525504 KIF24Q5T7B8 1368 aa8.26□□□□□ -1.09
CCDC90B-204ENST00000525504 SMPD1P17405 629 aa8.26□□□□□ -1.09
CCDC90B-204ENST00000525504 DNAJB2P25686 324 aa8.26□□□□□ -1.09
CCDC90B-204ENST00000525504 TXNRD1Q16881 649 aa8.26□□□□□ -1.09
CCDC90B-204ENST00000525504 NBPF6Q5VWK0 638 aa8.26□□□□□ -1.09
CCDC90B-204ENST00000525504 NBPF4Q96M43 638 aa8.26□□□□□ -1.09
CCDC90B-204ENST00000525504 KCNMA1Q12791 1236 aa8.25□□□□□ -1.09
CCDC90B-204ENST00000525504 RRS1Q15050 365 aaKnown RBP8.25□□□□□ -1.09
CCDC90B-204ENST00000525504 HSP90AB2PQ58FF8 381 aa8.25□□□□□ -1.09
CCDC90B-204ENST00000525504 SNIP1Q8TAD8 396 aaKnown RBP8.25□□□□□ -1.09
CCDC90B-204ENST00000525504 LTV1Q96GA3 475 aaPredicted RBP8.25□□□□□ -1.09
CCDC90B-204ENST00000525504 CGNL1Q0VF96 1302 aa8.25□□□□□ -1.09
CCDC90B-204ENST00000525504 RTL1A6NKG5 1358 aa8.24□□□□□ -1.09
CCDC90B-204ENST00000525504 INSRP06213 1382 aa8.24□□□□□ -1.09
CCDC90B-204ENST00000525504 TNS2Q63HR2 1409 aa8.24□□□□□ -1.09
CCDC90B-204ENST00000525504 CFHP08603 1231 aa8.24□□□□□ -1.09
CCDC90B-204ENST00000525504 EIF4G2P78344 907 aaKnown RBP eCLIP8.24□□□□□ -1.09
CCDC90B-204ENST00000525504 ZCRB1Q8TBF4 217 aaKnown RBP8.24□□□□□ -1.09
CCDC90B-204ENST00000525504 SPSB2Q99619 263 aa8.24□□□□□ -1.09
CCDC90B-204ENST00000525504 TMEM134Q9H6X4 195 aa8.24□□□□□ -1.09
CCDC90B-204ENST00000525504 SPON1Q9HCB6 807 aa8.24□□□□□ -1.09
CCDC90B-204ENST00000525504 PLCB2Q00722 1185 aa8.23□□□□□ -1.09
CCDC90B-204ENST00000525504 SLC15A2Q16348 729 aa8.23□□□□□ -1.09
CCDC90B-204ENST00000525504 SCUBE3Q8IX30 993 aa8.23□□□□□ -1.09
CCDC90B-204ENST00000525504 CCER1Q8TC90 406 aaPredicted RBP8.23□□□□□ -1.09
CCDC90B-204ENST00000525504 DDX54Q8TDD1 881 aaKnown RBP8.23□□□□□ -1.09
CCDC90B-204ENST00000525504 WASHC2AQ641Q2 1341 aa8.23□□□□□ -1.09
CCDC90B-204ENST00000525504 WNT7AO00755 349 aa8.22□□□□□ -1.09
CCDC90B-204ENST00000525504 HSPA5P11021 654 aaKnown RBP8.22□□□□□ -1.09
CCDC90B-204ENST00000525504 KCTD17Q8N5Z5 321 aa8.22□□□□□ -1.09
CCDC90B-204ENST00000525504 ACSBG1Q96GR2 724 aa8.22□□□□□ -1.09
CCDC90B-204ENST00000525504 PDGFDQ9GZP0 370 aaPredicted RBP8.22□□□□□ -1.09
CCDC90B-204ENST00000525504 LRRC4BQ9NT99 713 aa8.22□□□□□ -1.09
CCDC90B-204ENST00000525504 POLKQ9UBT6 870 aa8.22□□□□□ -1.09
CCDC90B-204ENST00000525504 ARIH1Q9Y4X5 557 aaPredicted RBP8.22□□□□□ -1.09
CCDC90B-204ENST00000525504 PEAK1Q9H792 1746 aa8.22□□□□□ -1.09
CCDC90B-204ENST00000525504 PARP4Q9UKK3 1724 aaKnown RBP8.22□□□□□ -1.09
CCDC90B-204ENST00000525504 AKAP12Q02952 1782 aa8.22□□□□□ -1.09
CCDC90B-204ENST00000525504 USP54Q70EL1 1684 aa8.21□□□□□ -1.09
CCDC90B-204ENST00000525504 H3BM21 787 aa8.21□□□□□ -1.1
CCDC90B-204ENST00000525504 SLC27A3Q5K4L6 730 aa8.21□□□□□ -1.1
CCDC90B-204ENST00000525504 PANK3Q9H999 370 aa8.21□□□□□ -1.1
CCDC90B-204ENST00000525504 STK32BQ9NY57 414 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms