RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 ERFEQ4G0M1 354 aa12.84□□□□□ -0.35
TRAPPC4-206ENST00000525303 CNBD1Q8NA66 436 aa12.84□□□□□ -0.35
TRAPPC4-206ENST00000525303 PHACTR3Q96KR7 559 aa12.84□□□□□ -0.35
TRAPPC4-206ENST00000525303 SETDB2Q96T68 719 aa12.84□□□□□ -0.35
TRAPPC4-206ENST00000525303 PRKAR2BP31323 418 aa12.83□□□□□ -0.36
TRAPPC4-206ENST00000525303 ST5P78524 1137 aa12.83□□□□□ -0.36
TRAPPC4-206ENST00000525303 DZIP3Q86Y13 1208 aaKnown RBP12.83□□□□□ -0.36
TRAPPC4-206ENST00000525303 PIP4K2AP48426 406 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC4-206ENST00000525303 RSPH6AQ9H0K4 717 aa12.82□□□□□ -0.36
TRAPPC4-206ENST00000525303 TAOK3Q9H2K8 898 aa12.82□□□□□ -0.36
TRAPPC4-206ENST00000525303 USP16Q9Y5T5 823 aa12.82□□□□□ -0.36
TRAPPC4-206ENST00000525303 LTBP3Q9NS15 1303 aa12.82□□□□□ -0.36
TRAPPC4-206ENST00000525303 PRAMEF22A3QJZ6 481 aa12.81□□□□□ -0.36
TRAPPC4-206ENST00000525303 SRGNP10124 158 aa12.81□□□□□ -0.36
TRAPPC4-206ENST00000525303 STYK1Q6J9G0 422 aa12.81□□□□□ -0.36
TRAPPC4-206ENST00000525303 PRPF40BQ6NWY9 871 aaKnown RBP12.81□□□□□ -0.36
TRAPPC4-206ENST00000525303 CNKSR1Q969H4 720 aa12.81□□□□□ -0.36
TRAPPC4-206ENST00000525303 KDM3BQ7LBC6 1761 aa12.81□□□□□ -0.36
TRAPPC4-206ENST00000525303 MASTLQ96GX5 879 aa12.8□□□□□ -0.36
TRAPPC4-206ENST00000525303 CFAP53Q96M91 514 aa12.8□□□□□ -0.36
TRAPPC4-206ENST00000525303 CAPN15O75808 1086 aa12.79□□□□□ -0.36
TRAPPC4-206ENST00000525303 DDNO94850 711 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC4-206ENST00000525303 HSPA1AP0DMV8 641 aaKnown RBP12.79□□□□□ -0.36
TRAPPC4-206ENST00000525303 HSPA1BP0DMV9 641 aaKnown RBP12.79□□□□□ -0.36
TRAPPC4-206ENST00000525303 MCM10Q7L590 875 aa12.79□□□□□ -0.36
TRAPPC4-206ENST00000525303 NBPF5PQ86XG9 351 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC4-206ENST00000525303 TNS4Q8IZW8 715 aa12.79□□□□□ -0.36
TRAPPC4-206ENST00000525303 SNRPA1P09661 255 aaKnown RBP12.78□□□□□ -0.36
TRAPPC4-206ENST00000525303 POTEIP0CG38 1075 aa12.78□□□□□ -0.36
TRAPPC4-206ENST00000525303 POTEJP0CG39 1038 aa12.78□□□□□ -0.36
TRAPPC4-206ENST00000525303 SOGA3Q5TF21 947 aa12.78□□□□□ -0.36
TRAPPC4-206ENST00000525303 CHADLQ6NUI6 762 aa12.78□□□□□ -0.36
TRAPPC4-206ENST00000525303 CLEC4GQ6UXB4 293 aa12.78□□□□□ -0.36
TRAPPC4-206ENST00000525303 RTF1Q92541 710 aaKnown RBP12.78□□□□□ -0.36
TRAPPC4-206ENST00000525303 ZNF652Q9Y2D9 606 aa12.78□□□□□ -0.36
TRAPPC4-206ENST00000525303 U2AF1L5P0DN76 240 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC4-206ENST00000525303 U2AF1Q01081 240 aaKnown RBP eCLIP12.77□□□□□ -0.37
TRAPPC4-206ENST00000525303 DCTN1Q14203 1278 aa12.77□□□□□ -0.37
TRAPPC4-206ENST00000525303 NUDCQ9Y266 331 aa12.77□□□□□ -0.37
TRAPPC4-206ENST00000525303 ADAMTSL1Q8N6G6 1762 aa12.76□□□□□ -0.37
TRAPPC4-206ENST00000525303 NBPF26B4DH59 902 aa12.76□□□□□ -0.37
TRAPPC4-206ENST00000525303 NPR1P16066 1061 aa12.76□□□□□ -0.37
TRAPPC4-206ENST00000525303 CCDC93Q567U6 631 aa12.76□□□□□ -0.37
TRAPPC4-206ENST00000525303 NBPF10Q6P3W6 841 aaKnown RBP12.76□□□□□ -0.37
TRAPPC4-206ENST00000525303 NBPF15Q8N660 670 aa12.76□□□□□ -0.37
TRAPPC4-206ENST00000525303 C7orf43Q8WVR3 580 aa12.76□□□□□ -0.37
TRAPPC4-206ENST00000525303 CREBZFQ9NS37 354 aa12.76□□□□□ -0.37
TRAPPC4-206ENST00000525303 NIP7Q9Y221 180 aaKnown RBP eCLIP12.76□□□□□ -0.37
TRAPPC4-206ENST00000525303 FAM177BA6PVY3 158 aa12.75□□□□□ -0.37
TRAPPC4-206ENST00000525303 PPP2R1AP30153 589 aa12.75□□□□□ -0.37
TRAPPC4-206ENST00000525303 OLFM4Q6UX06 510 aa12.75□□□□□ -0.37
TRAPPC4-206ENST00000525303 TPTE2Q6XPS3 522 aa12.75□□□□□ -0.37
TRAPPC4-206ENST00000525303 MKRN1Q9UHC7 482 aaKnown RBP12.75□□□□□ -0.37
TRAPPC4-206ENST00000525303 TRPM7Q96QT4 1865 aa12.74□□□□□ -0.37
TRAPPC4-206ENST00000525303 KLRG2A4D1S0 409 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC4-206ENST00000525303 IQCA1LA6NCM1 817 aa12.74□□□□□ -0.37
TRAPPC4-206ENST00000525303 ZNF277Q9NRM2 450 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC4-206ENST00000525303 ZNF541Q9H0D2 1346 aa12.73□□□□□ -0.37
TRAPPC4-206ENST00000525303 HTATSF1O43719 755 aaKnown RBP12.73□□□□□ -0.37
TRAPPC4-206ENST00000525303 FKBP4Q02790 459 aaKnown RBP eCLIP12.73□□□□□ -0.37
TRAPPC4-206ENST00000525303 HLFQ16534 295 aa12.73□□□□□ -0.37
TRAPPC4-206ENST00000525303 LDHDQ86WU2 507 aa12.73□□□□□ -0.37
TRAPPC4-206ENST00000525303 L3MBTL3Q96JM7 780 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC4-206ENST00000525303 TAF1DQ9H5J8 278 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC4-206ENST00000525303 MIS18AQ9NYP9 233 aa12.73□□□□□ -0.37
TRAPPC4-206ENST00000525303 LAMB2P55268 1798 aa12.72□□□□□ -0.37
TRAPPC4-206ENST00000525303 ANKRD36CQ5JPF3 1778 aa12.72□□□□□ -0.37
TRAPPC4-206ENST00000525303 PASKQ96RG2 1323 aa12.72□□□□□ -0.37
TRAPPC4-206ENST00000525303 RGL2O15211 777 aa12.72□□□□□ -0.37
TRAPPC4-206ENST00000525303 GTF2E1P29083 439 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC4-206ENST00000525303 TAF7Q15545 349 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC4-206ENST00000525303 CNTNAP1P78357 1384 aa12.71□□□□□ -0.37
TRAPPC4-206ENST00000525303 ALDH1B1P30837 517 aa12.71□□□□□ -0.37
TRAPPC4-206ENST00000525303 EAPPQ56P03 285 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC4-206ENST00000525303 RTKN2Q8IZC4 609 aa12.71□□□□□ -0.37
TRAPPC4-206ENST00000525303 NGEFQ8N5V2 710 aa12.71□□□□□ -0.37
TRAPPC4-206ENST00000525303 HACL1Q9UJ83 578 aa12.71□□□□□ -0.37
TRAPPC4-206ENST00000525303 LTBP1Q14766 1721 aa12.71□□□□□ -0.38
TRAPPC4-206ENST00000525303 ABCC12Q96J65 1359 aa12.7□□□□□ -0.38
TRAPPC4-206ENST00000525303 EPHX2P34913 555 aa12.7□□□□□ -0.38
TRAPPC4-206ENST00000525303 IARSP41252 1262 aaKnown RBP12.7□□□□□ -0.38
TRAPPC4-206ENST00000525303 SYNE4Q8N205 404 aa12.7□□□□□ -0.38
TRAPPC4-206ENST00000525303 CLEC11AQ9Y240 323 aa12.7□□□□□ -0.38
TRAPPC4-206ENST00000525303 SNED1Q8TER0 1413 aa12.7□□□□□ -0.38
TRAPPC4-206ENST00000525303 RNF123Q5XPI4 1314 aa12.69□□□□□ -0.38
TRAPPC4-206ENST00000525303 ITGBL1O95965 494 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC4-206ENST00000525303 NUTM1Q86Y26 1132 aa12.69□□□□□ -0.38
TRAPPC4-206ENST00000525303 COL4A5P29400 1685 aa12.69□□□□□ -0.38
TRAPPC4-206ENST00000525303 TAF1P21675 1872 aa12.69□□□□□ -0.38
TRAPPC4-206ENST00000525303 TMEM88BA6NKF7 163 aa12.68□□□□□ -0.38
TRAPPC4-206ENST00000525303 FZD9O00144 591 aa12.68□□□□□ -0.38
TRAPPC4-206ENST00000525303 FOXN1O15353 648 aa12.68□□□□□ -0.38
TRAPPC4-206ENST00000525303 NEFMP07197 916 aa12.68□□□□□ -0.38
TRAPPC4-206ENST00000525303 CRY2Q49AN0 593 aa12.68□□□□□ -0.38
TRAPPC4-206ENST00000525303 NYXQ9GZU5 481 aa12.68□□□□□ -0.38
TRAPPC4-206ENST00000525303 RRP7AQ9Y3A4 280 aaKnown RBP12.68□□□□□ -0.38
TRAPPC4-206ENST00000525303 MAP3K15Q6ZN16 1313 aa12.67□□□□□ -0.38
TRAPPC4-206ENST00000525303 ERVV-1B6SEH8 477 aa12.67□□□□□ -0.38
TRAPPC4-206ENST00000525303 MYL6BP14649 208 aa12.67□□□□□ -0.38
TRAPPC4-206ENST00000525303 GPTP24298 496 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms