RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 PCNTO95613 3336 aa32.03■■■□□ 2.72
USP47-205ENST00000525257 U2AF1L5P0DN76 240 aaPredicted RBP32.03■■■□□ 2.72
USP47-205ENST00000525257 U2AF1Q01081 240 aaKnown RBP eCLIP32.03■■■□□ 2.72
USP47-205ENST00000525257 ERFEQ4G0M1 354 aa32.03■■■□□ 2.72
USP47-205ENST00000525257 DPY19L2Q6NUT2 758 aa32.03■■■□□ 2.72
USP47-205ENST00000525257 MCM10Q7L590 875 aa32.03■■■□□ 2.72
USP47-205ENST00000525257 POTECB2RU33 542 aa32.02■■■□□ 2.72
USP47-205ENST00000525257 RTF1Q92541 710 aaKnown RBP32.02■■■□□ 2.72
USP47-205ENST00000525257 ARFGEF2Q9Y6D5 1785 aa32.02■■■□□ 2.72
USP47-205ENST00000525257 STYK1Q6J9G0 422 aa32.01■■■□□ 2.71
USP47-205ENST00000525257 CNKSR1Q969H4 720 aa32.01■■■□□ 2.71
USP47-205ENST00000525257 TAOK3Q9H2K8 898 aa32.01■■■□□ 2.71
USP47-205ENST00000525257 SRGNP10124 158 aa32■■■□□ 2.71
USP47-205ENST00000525257 PRPF40BQ6NWY9 871 aaKnown RBP32■■■□□ 2.71
USP47-205ENST00000525257 LTBP3Q9NS15 1303 aa32■■■□□ 2.71
USP47-205ENST00000525257 SNRPA1P09661 255 aaKnown RBP31.99■■■□□ 2.71
USP47-205ENST00000525257 PPP2R1AP30153 589 aa31.99■■■□□ 2.71
USP47-205ENST00000525257 DCTN1Q14203 1278 aa31.98■■■□□ 2.71
USP47-205ENST00000525257 NBPF5PQ86XG9 351 aaPredicted RBP31.98■■■□□ 2.71
USP47-205ENST00000525257 MASTLQ96GX5 879 aa31.98■■■□□ 2.71
USP47-205ENST00000525257 ZNF652Q9Y2D9 606 aa31.96■■■□□ 2.71
USP47-205ENST00000525257 COL13A1Q5TAT6 717 aaPredicted RBP31.95■■■□□ 2.71
USP47-205ENST00000525257 CLEC4GQ6UXB4 293 aa31.95■■■□□ 2.71
USP47-205ENST00000525257 SOGA3Q5TF21 947 aa31.93■■■□□ 2.7
USP47-205ENST00000525257 NBPF26B4DH59 902 aa31.92■■■□□ 2.7
USP47-205ENST00000525257 NBPF10Q6P3W6 841 aaKnown RBP31.92■■■□□ 2.7
USP47-205ENST00000525257 NBPF15Q8N660 670 aa31.92■■■□□ 2.7
USP47-205ENST00000525257 DDNO94850 711 aaPredicted RBP31.91■■■□□ 2.7
USP47-205ENST00000525257 NIP7Q9Y221 180 aaKnown RBP eCLIP31.9■■■□□ 2.7
USP47-205ENST00000525257 FAM177BA6PVY3 158 aa31.89■■■□□ 2.7
USP47-205ENST00000525257 HTATSF1O43719 755 aaKnown RBP31.89■■■□□ 2.7
USP47-205ENST00000525257 LAMB4A4D0S4 1761 aa31.89■■■□□ 2.69
USP47-205ENST00000525257 NPR1P16066 1061 aa31.88■■■□□ 2.69
USP47-205ENST00000525257 C7orf43Q8WVR3 580 aa31.88■■■□□ 2.69
USP47-205ENST00000525257 POTEIP0CG38 1075 aa31.87■■■□□ 2.69
USP47-205ENST00000525257 POTEJP0CG39 1038 aa31.87■■■□□ 2.69
USP47-205ENST00000525257 TAF7Q15545 349 aaPredicted RBP31.87■■■□□ 2.69
USP47-205ENST00000525257 CCDC93Q567U6 631 aa31.87■■■□□ 2.69
USP47-205ENST00000525257 TPTE2Q6XPS3 522 aa31.87■■■□□ 2.69
USP47-205ENST00000525257 MIS18AQ9NYP9 233 aa31.87■■■□□ 2.69
USP47-205ENST00000525257 CHADLQ6NUI6 762 aa31.86■■■□□ 2.69
USP47-205ENST00000525257 KLRG2A4D1S0 409 aaPredicted RBP31.84■■■□□ 2.69
USP47-205ENST00000525257 HLFQ16534 295 aa31.84■■■□□ 2.69
USP47-205ENST00000525257 DLG5Q8TDM6 1919 aa31.83■■■□□ 2.69
USP47-205ENST00000525257 RGL2O15211 777 aa31.83■■■□□ 2.69
USP47-205ENST00000525257 HSPA1AP0DMV8 641 aaKnown RBP31.83■■■□□ 2.69
USP47-205ENST00000525257 HSPA1BP0DMV9 641 aaKnown RBP31.83■■■□□ 2.69
USP47-205ENST00000525257 OLFM4Q6UX06 510 aa31.83■■■□□ 2.69
USP47-205ENST00000525257 KDM3BQ7LBC6 1761 aa31.81■■■□□ 2.68
USP47-205ENST00000525257 FKBP4Q02790 459 aaKnown RBP eCLIP31.81■■■□□ 2.68
USP47-205ENST00000525257 ZNF277Q9NRM2 450 aaPredicted RBP31.81■■■□□ 2.68
USP47-205ENST00000525257 TNS4Q8IZW8 715 aa31.8■■■□□ 2.68
USP47-205ENST00000525257 NGEFQ8N5V2 710 aa31.8■■■□□ 2.68
USP47-205ENST00000525257 SCN4AP35499 1836 aa31.79■■■□□ 2.68
USP47-205ENST00000525257 IQCA1LA6NCM1 817 aa31.79■■■□□ 2.68
USP47-205ENST00000525257 GTF2E1P29083 439 aaPredicted RBP31.79■■■□□ 2.68
USP47-205ENST00000525257 NEFMP07197 916 aa31.78■■■□□ 2.68
USP47-205ENST00000525257 L3MBTL3Q96JM7 780 aaPredicted RBP31.78■■■□□ 2.68
USP47-205ENST00000525257 CREBZFQ9NS37 354 aa31.78■■■□□ 2.68
USP47-205ENST00000525257 ZNF541Q9H0D2 1346 aa31.77■■■□□ 2.68
USP47-205ENST00000525257 CAPN15O75808 1086 aa31.77■■■□□ 2.68
USP47-205ENST00000525257 RTKN2Q8IZC4 609 aa31.76■■■□□ 2.67
USP47-205ENST00000525257 TAF1DQ9H5J8 278 aaPredicted RBP31.76■■■□□ 2.67
USP47-205ENST00000525257 MKRN1Q9UHC7 482 aaKnown RBP31.76■■■□□ 2.67
USP47-205ENST00000525257 NUP98P52948 1817 aa31.75■■■□□ 2.67
USP47-205ENST00000525257 ALDH1B1P30837 517 aa31.75■■■□□ 2.67
USP47-205ENST00000525257 LDHDQ86WU2 507 aa31.75■■■□□ 2.67
USP47-205ENST00000525257 PNISRQ8TF01 805 aaKnown RBP31.75■■■□□ 2.67
USP47-205ENST00000525257 ABCC12Q96J65 1359 aa31.75■■■□□ 2.67
USP47-205ENST00000525257 NUTM1Q86Y26 1132 aa31.74■■■□□ 2.67
USP47-205ENST00000525257 RRP7AQ9Y3A4 280 aaKnown RBP31.74■■■□□ 2.67
USP47-205ENST00000525257 THUMPD2Q9BTF0 503 aaKnown RBP31.73■■■□□ 2.67
USP47-205ENST00000525257 EIF4A1P60842 406 aaKnown RBP31.72■■■□□ 2.67
USP47-205ENST00000525257 EAPPQ56P03 285 aaPredicted RBP31.72■■■□□ 2.67
USP47-205ENST00000525257 SYNE4Q8N205 404 aa31.72■■■□□ 2.67
USP47-205ENST00000525257 NYXQ9GZU5 481 aa31.72■■■□□ 2.67
USP47-205ENST00000525257 MAP3K15Q6ZN16 1313 aa31.72■■■□□ 2.67
USP47-205ENST00000525257 ERVV-1B6SEH8 477 aa31.71■■■□□ 2.67
USP47-205ENST00000525257 IARSP41252 1262 aaKnown RBP31.71■■■□□ 2.67
USP47-205ENST00000525257 KIF6Q6ZMV9 814 aa31.71■■■□□ 2.67
USP47-205ENST00000525257 TTLL7Q6ZT98 887 aa31.71■■■□□ 2.67
USP47-205ENST00000525257 PLEKHF1Q96S99 279 aa31.71■■■□□ 2.67
USP47-205ENST00000525257 MYL6BP14649 208 aa31.7■■■□□ 2.67
USP47-205ENST00000525257 NFE2L2Q16236 605 aa31.7■■■□□ 2.67
USP47-205ENST00000525257 PASKQ96RG2 1323 aa31.7■■■□□ 2.66
USP47-205ENST00000525257 GPTP24298 496 aa31.69■■■□□ 2.66
USP47-205ENST00000525257 CRY2Q49AN0 593 aa31.69■■■□□ 2.66
USP47-205ENST00000525257 HACL1Q9UJ83 578 aa31.69■■■□□ 2.66
USP47-205ENST00000525257 ZBTB3Q9H5J0 574 aa31.68■■■□□ 2.66
USP47-205ENST00000525257 SNED1Q8TER0 1413 aa31.67■■■□□ 2.66
USP47-205ENST00000525257 CLEC11AQ9Y240 323 aa31.67■■■□□ 2.66
USP47-205ENST00000525257 RNF123Q5XPI4 1314 aa31.67■■■□□ 2.66
USP47-205ENST00000525257 FZD9O00144 591 aa31.66■■■□□ 2.66
USP47-205ENST00000525257 EPHX2P34913 555 aa31.66■■■□□ 2.66
USP47-205ENST00000525257 UBN2Q6ZU65 1347 aa31.66■■■□□ 2.66
USP47-205ENST00000525257 CNTNAP1P78357 1384 aa31.66■■■□□ 2.66
USP47-205ENST00000525257 ADAMTSL1Q8N6G6 1762 aa31.66■■■□□ 2.66
USP47-205ENST00000525257 RPGRQ92834 1020 aaKnown RBP31.65■■■□□ 2.66
USP47-205ENST00000525257 PSMD1Q99460 953 aa31.64■■■□□ 2.66
USP47-205ENST00000525257 MAPK8IP3Q9UPT6 1336 aa31.64■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms