RNA–Protein interactions for RNA: ENST00000525045.5

PABPC4-219, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-219ENST00000525045 CCDC24Q8N4L8 307 aa18.88■□□□□ 0.61
PABPC4-219ENST00000525045 TIAM2Q8IVF5 1701 aa18.88■□□□□ 0.61
PABPC4-219ENST00000525045 FER1L6Q2WGJ9 1857 aa18.88■□□□□ 0.61
PABPC4-219ENST00000525045 SIPA1L3O60292 1781 aaPredicted RBP18.87■□□□□ 0.61
PABPC4-219ENST00000525045 SNRPA1P09661 255 aaKnown RBP18.87■□□□□ 0.61
PABPC4-219ENST00000525045 SCN7AQ01118 1682 aa18.87■□□□□ 0.61
PABPC4-219ENST00000525045 CHADLQ6NUI6 762 aa18.87■□□□□ 0.61
PABPC4-219ENST00000525045 RGL2O15211 777 aa18.86■□□□□ 0.61
PABPC4-219ENST00000525045 PRPF40BQ6NWY9 871 aaKnown RBP18.86■□□□□ 0.61
PABPC4-219ENST00000525045 TPTE2Q6XPS3 522 aa18.86■□□□□ 0.61
PABPC4-219ENST00000525045 NBPF5PQ86XG9 351 aaPredicted RBP18.86■□□□□ 0.61
PABPC4-219ENST00000525045 PHACTR3Q96KR7 559 aa18.86■□□□□ 0.61
PABPC4-219ENST00000525045 RSPH6AQ9H0K4 717 aa18.86■□□□□ 0.61
PABPC4-219ENST00000525045 USP16Q9Y5T5 823 aa18.86■□□□□ 0.61
PABPC4-219ENST00000525045 IQCA1LA6NCM1 817 aa18.85■□□□□ 0.61
PABPC4-219ENST00000525045 KCNQ3O43525 872 aa18.85■□□□□ 0.61
PABPC4-219ENST00000525045 CREBZFQ9NS37 354 aa18.85■□□□□ 0.61
PABPC4-219ENST00000525045 HTATSF1O43719 755 aaKnown RBP18.84■□□□□ 0.61
PABPC4-219ENST00000525045 HSPA1AP0DMV8 641 aaKnown RBP18.84■□□□□ 0.61
PABPC4-219ENST00000525045 HSPA1BP0DMV9 641 aaKnown RBP18.84■□□□□ 0.61
PABPC4-219ENST00000525045 NPR1P16066 1061 aa18.84■□□□□ 0.61
PABPC4-219ENST00000525045 DDNO94850 711 aaPredicted RBP18.83■□□□□ 0.6
PABPC4-219ENST00000525045 CCDC93Q567U6 631 aa18.83■□□□□ 0.6
PABPC4-219ENST00000525045 SLX4Q8IY92 1834 aa18.83■□□□□ 0.6
PABPC4-219ENST00000525045 U2AF1L5P0DN76 240 aaPredicted RBP18.82■□□□□ 0.6
PABPC4-219ENST00000525045 U2AF1Q01081 240 aaKnown RBP eCLIP18.82■□□□□ 0.65e-6■□□□□ 8
PABPC4-219ENST00000525045 COL11A2P13942 1736 aaPredicted RBP18.81■□□□□ 0.6
PABPC4-219ENST00000525045 KLRG2A4D1S0 409 aaPredicted RBP18.81■□□□□ 0.6
PABPC4-219ENST00000525045 RTKN2Q8IZC4 609 aa18.81■□□□□ 0.6
PABPC4-219ENST00000525045 C7orf43Q8WVR3 580 aa18.81■□□□□ 0.6
PABPC4-219ENST00000525045 L3MBTL3Q96JM7 780 aaPredicted RBP18.81■□□□□ 0.6
PABPC4-219ENST00000525045 ALDH1B1P30837 517 aa18.8■□□□□ 0.6
PABPC4-219ENST00000525045 FKBP4Q02790 459 aaKnown RBP eCLIP18.8■□□□□ 0.6
PABPC4-219ENST00000525045 LDHDQ86WU2 507 aa18.8■□□□□ 0.6
PABPC4-219ENST00000525045 NIP7Q9Y221 180 aaKnown RBP eCLIP18.8■□□□□ 0.6
PABPC4-219ENST00000525045 BCORQ6W2J9 1755 aa18.79■□□□□ 0.6
PABPC4-219ENST00000525045 NEFMP07197 916 aa18.79■□□□□ 0.6
PABPC4-219ENST00000525045 GTF2E1P29083 439 aaPredicted RBP18.79■□□□□ 0.6
PABPC4-219ENST00000525045 PIP4K2AP48426 406 aaPredicted RBP18.79■□□□□ 0.6
PABPC4-219ENST00000525045 TAF7Q15545 349 aaPredicted RBP18.79■□□□□ 0.6
PABPC4-219ENST00000525045 MCM10Q7L590 875 aa18.79■□□□□ 0.6
PABPC4-219ENST00000525045 ARFGEF2Q9Y6D5 1785 aa18.78■□□□□ 0.6
PABPC4-219ENST00000525045 PRAMEF22A3QJZ6 481 aa18.78■□□□□ 0.6
PABPC4-219ENST00000525045 CAPN15O75808 1086 aa18.78■□□□□ 0.6
PABPC4-219ENST00000525045 CACNA1SQ13698 1873 aa18.77■□□□□ 0.6
PABPC4-219ENST00000525045 SCN4AP35499 1836 aa18.77■□□□□ 0.6
PABPC4-219ENST00000525045 TAF1DQ9H5J8 278 aaPredicted RBP18.77■□□□□ 0.6
PABPC4-219ENST00000525045 NBPF26B4DH59 902 aa18.76■□□□□ 0.59
PABPC4-219ENST00000525045 PPP2R1AP30153 589 aa18.76■□□□□ 0.59
PABPC4-219ENST00000525045 NBPF10Q6P3W6 841 aaKnown RBP18.76■□□□□ 0.59
PABPC4-219ENST00000525045 NBPF15Q8N660 670 aa18.76■□□□□ 0.59
PABPC4-219ENST00000525045 PNISRQ8TF01 805 aaKnown RBP18.76■□□□□ 0.59
PABPC4-219ENST00000525045 NYXQ9GZU5 481 aa18.76■□□□□ 0.59
PABPC4-219ENST00000525045 MKRN1Q9UHC7 482 aaKnown RBP18.76■□□□□ 0.59
PABPC4-219ENST00000525045 POTEIP0CG38 1075 aa18.75■□□□□ 0.59
PABPC4-219ENST00000525045 POTEJP0CG39 1038 aa18.75■□□□□ 0.59
PABPC4-219ENST00000525045 CC2D2BQ6DHV5 1058 aa18.75■□□□□ 0.59
PABPC4-219ENST00000525045 PNMA8AQ86V59 439 aaPredicted RBP18.75■□□□□ 0.59
PABPC4-219ENST00000525045 HACL1Q9UJ83 578 aa18.75■□□□□ 0.59
PABPC4-219ENST00000525045 PASKQ96RG2 1323 aa18.74■□□□□ 0.59
PABPC4-219ENST00000525045 FAM177BA6PVY3 158 aa18.74■□□□□ 0.59
PABPC4-219ENST00000525045 ERVV-1B6SEH8 477 aa18.74■□□□□ 0.59
PABPC4-219ENST00000525045 DCTN1Q14203 1278 aa18.74■□□□□ 0.59
PABPC4-219ENST00000525045 ZNF277Q9NRM2 450 aaPredicted RBP18.74■□□□□ 0.59
PABPC4-219ENST00000525045 CLEC11AQ9Y240 323 aa18.74■□□□□ 0.59
PABPC4-219ENST00000525045 TMEM88BA6NKF7 163 aa18.73■□□□□ 0.59
PABPC4-219ENST00000525045 IARSP41252 1262 aaKnown RBP18.73■□□□□ 0.59
PABPC4-219ENST00000525045 GRIPAP1Q4V328 841 aa18.73■□□□□ 0.59
PABPC4-219ENST00000525045 SYNE4Q8N205 404 aa18.73■□□□□ 0.59
PABPC4-219ENST00000525045 JDP2Q8WYK2 163 aa18.73■□□□□ 0.59
PABPC4-219ENST00000525045 CNTNAP1P78357 1384 aa18.72■□□□□ 0.59
PABPC4-219ENST00000525045 PCNTO95613 3336 aa18.72■□□□□ 0.59
PABPC4-219ENST00000525045 FZD9O00144 591 aa18.72■□□□□ 0.59
PABPC4-219ENST00000525045 EAPPQ56P03 285 aaPredicted RBP18.72■□□□□ 0.59
PABPC4-219ENST00000525045 ITGBL1O95965 494 aaPredicted RBP18.71■□□□□ 0.59
PABPC4-219ENST00000525045 EPHX2P34913 555 aa18.71■□□□□ 0.59
PABPC4-219ENST00000525045 HLFQ16534 295 aa18.71■□□□□ 0.59
PABPC4-219ENST00000525045 AIDAQ96BJ3 306 aa18.71■□□□□ 0.59
PABPC4-219ENST00000525045 PSMD1Q99460 953 aa18.71■□□□□ 0.59
PABPC4-219ENST00000525045 GPC2Q8N158 579 aa18.7■□□□□ 0.58
PABPC4-219ENST00000525045 PNNQ9H307 717 aaKnown RBP18.7■□□□□ 0.58
PABPC4-219ENST00000525045 PRDM10Q9NQV6 1147 aa18.7■□□□□ 0.58
PABPC4-219ENST00000525045 ZNF541Q9H0D2 1346 aa18.7■□□□□ 0.58
PABPC4-219ENST00000525045 EIF6P56537 245 aaKnown RBP18.69■□□□□ 0.58
PABPC4-219ENST00000525045 CRY2Q49AN0 593 aa18.69■□□□□ 0.58
PABPC4-219ENST00000525045 KIF6Q6ZMV9 814 aa18.69■□□□□ 0.58
PABPC4-219ENST00000525045 RPGRQ92834 1020 aaKnown RBP18.69■□□□□ 0.58
PABPC4-219ENST00000525045 MIS18AQ9NYP9 233 aa18.69■□□□□ 0.58
PABPC4-219ENST00000525045 MAP3K15Q6ZN16 1313 aa18.69■□□□□ 0.58
PABPC4-219ENST00000525045 CTCFP49711 727 aaPredicted RBP18.68■□□□□ 0.58
PABPC4-219ENST00000525045 CNTROBQ8N137 903 aa18.68■□□□□ 0.58
PABPC4-219ENST00000525045 NGEFQ8N5V2 710 aa18.68■□□□□ 0.58
PABPC4-219ENST00000525045 RRP7AQ9Y3A4 280 aaKnown RBP18.68■□□□□ 0.58
PABPC4-219ENST00000525045 OLFM4Q6UX06 510 aa18.67■□□□□ 0.58
PABPC4-219ENST00000525045 FOXN1O15353 648 aa18.66■□□□□ 0.58
PABPC4-219ENST00000525045 LMOD1P29536 600 aaPredicted RBP18.66■□□□□ 0.58
PABPC4-219ENST00000525045 HOXA10P31260 410 aaPredicted RBP18.66■□□□□ 0.58
PABPC4-219ENST00000525045 VEGFBP49765 207 aa18.66■□□□□ 0.58
PABPC4-219ENST00000525045 EIF4A1P60842 406 aaKnown RBP18.66■□□□□ 0.58
PABPC4-219ENST00000525045 DEFB115Q30KQ5 88 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms