RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 PLBD2Q8NHP8 589 aa18.8■□□□□ 0.6
BEST1-204ENST00000524926 PIGBQ92521 554 aa18.8■□□□□ 0.6
BEST1-204ENST00000524926 KAZALD1Q96I82 304 aa18.8■□□□□ 0.6
BEST1-204ENST00000524926 TBC1D2Q9BYX2 928 aa18.79■□□□□ 0.6
BEST1-204ENST00000524926 ATP5J2-PTCD1G3V325 749 aa18.79■□□□□ 0.6
BEST1-204ENST00000524926 ASAP1Q9ULH1 1129 aa18.79■□□□□ 0.6
BEST1-204ENST00000524926 UBR2Q8IWV8 1755 aa18.79■□□□□ 0.6
BEST1-204ENST00000524926 STAP2Q9UGK3 403 aa18.78■□□□□ 0.6
BEST1-204ENST00000524926 DISP2A7MBM2 1401 aa18.78■□□□□ 0.6
BEST1-204ENST00000524926 KAT6BQ8WYB5 2073 aa18.78■□□□□ 0.6
BEST1-204ENST00000524926 PA2G4Q9UQ80 394 aaKnown RBP18.78■□□□□ 0.6
BEST1-204ENST00000524926 TOGARAM1Q9Y4F4 1720 aa18.77■□□□□ 0.6
BEST1-204ENST00000524926 TRIM6-TRIM34B2RNG4 842 aa18.77■□□□□ 0.6
BEST1-204ENST00000524926 JARID2Q92833 1246 aaPredicted RBP18.77■□□□□ 0.6
BEST1-204ENST00000524926 TNS2Q63HR2 1409 aa18.77■□□□□ 0.59
BEST1-204ENST00000524926 TTLL7Q6ZT98 887 aa18.76■□□□□ 0.59
BEST1-204ENST00000524926 RILPL2Q969X0 211 aa18.76■□□□□ 0.59
BEST1-204ENST00000524926 PAPPAQ13219 1627 aa18.76■□□□□ 0.59
BEST1-204ENST00000524926 SYTL4Q96C24 671 aaPredicted RBP18.76■□□□□ 0.59
BEST1-204ENST00000524926 RBM42Q9BTD8 480 aaKnown RBP18.76■□□□□ 0.59
BEST1-204ENST00000524926 ATG3Q9NT62 314 aa18.75■□□□□ 0.59
BEST1-204ENST00000524926 A0A087WZG4 1122 aa18.74■□□□□ 0.59
BEST1-204ENST00000524926 UBE3BQ7Z3V4 1068 aa18.74■□□□□ 0.59
BEST1-204ENST00000524926 ZNF330Q9Y3S2 320 aaPredicted RBP18.74■□□□□ 0.59
BEST1-204ENST00000524926 ERC1Q8IUD2 1116 aa18.74■□□□□ 0.59
BEST1-204ENST00000524926 CLASRPQ8N2M8 674 aaKnown RBP18.74■□□□□ 0.59
BEST1-204ENST00000524926 ZBTB3Q9H5J0 574 aa18.74■□□□□ 0.59
BEST1-204ENST00000524926 ARFGEF2Q9Y6D5 1785 aa18.74■□□□□ 0.59
BEST1-204ENST00000524926 AOX1Q06278 1338 aa18.73■□□□□ 0.59
BEST1-204ENST00000524926 G3BP1Q13283 466 aaKnown RBP eCLIP18.73■□□□□ 0.59
BEST1-204ENST00000524926 EPHA10Q5JZY3 1008 aa18.73■□□□□ 0.59
BEST1-204ENST00000524926 TEX13AQ9BXU3 409 aaPredicted RBP18.73■□□□□ 0.59
BEST1-204ENST00000524926 CCDC9Q9Y3X0 531 aaKnown RBP18.73■□□□□ 0.59
BEST1-204ENST00000524926 SPATA31A1Q5TZJ5 1347 aa18.73■□□□□ 0.59
BEST1-204ENST00000524926 DNAJC10Q8IXB1 793 aa18.73■□□□□ 0.59
BEST1-204ENST00000524926 UBAP1LF5GYI3 381 aa18.72■□□□□ 0.59
BEST1-204ENST00000524926 VSIG10Q8N0Z9 540 aa18.72■□□□□ 0.59
BEST1-204ENST00000524926 CDCA7Q9BWT1 371 aaPredicted RBP18.72■□□□□ 0.59
BEST1-204ENST00000524926 SLKQ9H2G2 1235 aaPredicted RBP18.72■□□□□ 0.59
BEST1-204ENST00000524926 AFDNP55196 1824 aaKnown RBP18.72■□□□□ 0.59
BEST1-204ENST00000524926 PLCH1Q4KWH8 1693 aa18.72■□□□□ 0.59
BEST1-204ENST00000524926 HSCBQ8IWL3 235 aa18.72■□□□□ 0.59
BEST1-204ENST00000524926 KIF2CQ99661 725 aa18.72■□□□□ 0.59
BEST1-204ENST00000524926 USP26Q9BXU7 913 aa18.72■□□□□ 0.59
BEST1-204ENST00000524926 SIL1Q9H173 461 aa18.72■□□□□ 0.59
BEST1-204ENST00000524926 ERC2O15083 957 aa18.71■□□□□ 0.59
BEST1-204ENST00000524926 REC8O95072 547 aa18.71■□□□□ 0.59
BEST1-204ENST00000524926 DDB1Q16531 1140 aa18.71■□□□□ 0.59
BEST1-204ENST00000524926 THRAP3Q9Y2W1 955 aaKnown RBP18.71■□□□□ 0.59
BEST1-204ENST00000524926 ITGB4P16144 1822 aa18.71■□□□□ 0.59
BEST1-204ENST00000524926 STARD3NLO95772 234 aa18.71■□□□□ 0.59
BEST1-204ENST00000524926 SPRYD3Q8NCJ5 442 aa18.71■□□□□ 0.59
BEST1-204ENST00000524926 KLHDC4Q8TBB5 520 aa18.71■□□□□ 0.59
BEST1-204ENST00000524926 A0A0G2JS52 829 aa18.7■□□□□ 0.58
BEST1-204ENST00000524926 MAP4K4O95819 1239 aaPredicted RBP18.7■□□□□ 0.58
BEST1-204ENST00000524926 PRIM1P49642 420 aaKnown RBP18.7■□□□□ 0.58
BEST1-204ENST00000524926 UNC5CLQ8IV45 518 aa18.7■□□□□ 0.58
BEST1-204ENST00000524926 BCL9O00512 1426 aa18.7■□□□□ 0.58
BEST1-204ENST00000524926 IFIT2P09913 472 aaKnown RBP18.7■□□□□ 0.58
BEST1-204ENST00000524926 RTL5Q5HYW3 569 aaPredicted RBP18.7■□□□□ 0.58
BEST1-204ENST00000524926 PI4K2BQ8TCG2 481 aa18.7■□□□□ 0.58
BEST1-204ENST00000524926 ARXQ96QS3 562 aa18.7■□□□□ 0.58
BEST1-204ENST00000524926 CWC25Q9NXE8 425 aaPredicted RBP18.7■□□□□ 0.58
BEST1-204ENST00000524926 SASH1O94885 1247 aa18.69■□□□□ 0.58
BEST1-204ENST00000524926 AACSQ86V21 672 aa18.68■□□□□ 0.58
BEST1-204ENST00000524926 CHMLP26374 656 aa18.68■□□□□ 0.58
BEST1-204ENST00000524926 TUBGCP6Q96RT7 1819 aa18.67■□□□□ 0.58
BEST1-204ENST00000524926 H7C1W4 665 aa18.67■□□□□ 0.58
BEST1-204ENST00000524926 CASP7P55210 303 aa18.67■□□□□ 0.58
BEST1-204ENST00000524926 SNX21Q969T3 373 aa18.67■□□□□ 0.58
BEST1-204ENST00000524926 SPATA31A5Q5VU36 1347 aa18.67■□□□□ 0.58
BEST1-204ENST00000524926 TTC41PQ6P2S7 1318 aa18.67■□□□□ 0.58
BEST1-204ENST00000524926 SPATA31A7Q8IWB4 1347 aa18.67■□□□□ 0.58
BEST1-204ENST00000524926 RABL6Q3YEC7 729 aaPredicted RBP18.66■□□□□ 0.58
BEST1-204ENST00000524926 CCDC191Q8NCU4 936 aa18.66■□□□□ 0.58
BEST1-204ENST00000524926 GPATCH3Q96I76 525 aa18.66■□□□□ 0.58
BEST1-204ENST00000524926 ESYT1Q9BSJ8 1104 aa18.66■□□□□ 0.58
BEST1-204ENST00000524926 GLRX3O76003 335 aaKnown RBP18.66■□□□□ 0.58
BEST1-204ENST00000524926 KIF6Q6ZMV9 814 aa18.66■□□□□ 0.58
BEST1-204ENST00000524926 ECHDC1Q9NTX5 307 aa18.66■□□□□ 0.58
BEST1-204ENST00000524926 CHMP3Q9Y3E7 222 aa18.66■□□□□ 0.58
BEST1-204ENST00000524926 NRAPQ86VF7 1730 aa18.66■□□□□ 0.58
BEST1-204ENST00000524926 WNK3Q9BYP7 1800 aa18.66■□□□□ 0.58
BEST1-204ENST00000524926 LMBR1LQ6UX01 489 aa18.65■□□□□ 0.58
BEST1-204ENST00000524926 CNTROBQ8N137 903 aa18.65■□□□□ 0.58
BEST1-204ENST00000524926 SLC4A9Q96Q91 983 aa18.65■□□□□ 0.58
BEST1-204ENST00000524926 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.65■□□□□ 0.58
BEST1-204ENST00000524926 ACSBG1Q96GR2 724 aa18.65■□□□□ 0.58
BEST1-204ENST00000524926 COPRSQ9NQ92 184 aa18.65■□□□□ 0.58
BEST1-204ENST00000524926 USP42Q9H9J4 1324 aaKnown RBP18.65■□□□□ 0.58
BEST1-204ENST00000524926 COL15A1P39059 1388 aa18.65■□□□□ 0.58
BEST1-204ENST00000524926 LRP6O75581 1613 aa18.65■□□□□ 0.58
BEST1-204ENST00000524926 NUP188Q5SRE5 1749 aa18.65■□□□□ 0.58
BEST1-204ENST00000524926 EAF2Q96CJ1 260 aaPredicted RBP18.64■□□□□ 0.58
BEST1-204ENST00000524926 CCDC8Q9H0W5 538 aaPredicted RBP18.64■□□□□ 0.58
BEST1-204ENST00000524926 RFX5P48382 616 aaPredicted RBP18.64■□□□□ 0.57
BEST1-204ENST00000524926 PTPN12Q05209 780 aaKnown RBP18.64■□□□□ 0.57
BEST1-204ENST00000524926 TCIRG1Q13488 830 aa18.64■□□□□ 0.57
BEST1-204ENST00000524926 NFKBIBQ15653 356 aa18.64■□□□□ 0.57
BEST1-204ENST00000524926 CYP19A1P11511 503 aaPredicted RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms