RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 B4GALNT3Q6L9W6 998 aa9.66□□□□□ -0.86
CTR9-202ENST00000524523 ARHGAP45Q92619 1136 aa9.66□□□□□ -0.86
CTR9-202ENST00000524523 CHMP4BQ9H444 224 aaKnown RBP9.66□□□□□ -0.86
CTR9-202ENST00000524523 BABAM1Q9NWV8 329 aa9.66□□□□□ -0.86
CTR9-202ENST00000524523 RRP7AQ9Y3A4 280 aaKnown RBP9.66□□□□□ -0.86
CTR9-202ENST00000524523 PLEKHG2Q9H7P9 1386 aa9.65□□□□□ -0.86
CTR9-202ENST00000524523 SOS1Q07889 1333 aaPredicted RBP9.65□□□□□ -0.86
CTR9-202ENST00000524523 IGSF1Q8N6C5 1336 aa9.65□□□□□ -0.86
CTR9-202ENST00000524523 FANCIQ9NVI1 1328 aa9.65□□□□□ -0.86
CTR9-202ENST00000524523 SSTR3P32745 418 aaPredicted RBP9.65□□□□□ -0.86
CTR9-202ENST00000524523 AMPHP49418 695 aa9.65□□□□□ -0.86
CTR9-202ENST00000524523 PUS10Q3MIT2 529 aaKnown RBP9.65□□□□□ -0.86
CTR9-202ENST00000524523 ESCO1Q5FWF5 840 aa9.65□□□□□ -0.86
CTR9-202ENST00000524523 IP6K1Q92551 441 aa9.65□□□□□ -0.86
CTR9-202ENST00000524523 REPIN1Q9BWE0 567 aaKnown RBP9.65□□□□□ -0.86
CTR9-202ENST00000524523 KIF16BQ96L93 1317 aa9.64□□□□□ -0.87
CTR9-202ENST00000524523 SENP3-EIF4A1A0A087X0R7 540 aa9.64□□□□□ -0.87
CTR9-202ENST00000524523 TCERG1O14776 1098 aaKnown RBP9.64□□□□□ -0.87
CTR9-202ENST00000524523 ATF3P18847 181 aa9.64□□□□□ -0.87
CTR9-202ENST00000524523 HSP90AB2PQ58FF8 381 aa9.64□□□□□ -0.87
CTR9-202ENST00000524523 GIGYF2Q6Y7W6 1299 aaKnown RBP9.64□□□□□ -0.87
CTR9-202ENST00000524523 CENPQQ7L2Z9 268 aaPredicted RBP9.64□□□□□ -0.87
CTR9-202ENST00000524523 SCUBE3Q8IX30 993 aa9.64□□□□□ -0.87
CTR9-202ENST00000524523 GAS2L2Q8NHY3 880 aa9.64□□□□□ -0.87
CTR9-202ENST00000524523 PHACTR3Q96KR7 559 aa9.64□□□□□ -0.87
CTR9-202ENST00000524523 CHMP4AQ9BY43 222 aa9.64□□□□□ -0.87
CTR9-202ENST00000524523 PLIN1O60240 522 aa9.63□□□□□ -0.87
CTR9-202ENST00000524523 KDM4AO75164 1064 aa9.63□□□□□ -0.87
CTR9-202ENST00000524523 BCAR3O75815 825 aa9.63□□□□□ -0.87
CTR9-202ENST00000524523 FBLN1P23142 703 aa9.63□□□□□ -0.87
CTR9-202ENST00000524523 HOXC9P31274 260 aa9.63□□□□□ -0.87
CTR9-202ENST00000524523 SULT6B1Q6IMI4 303 aa9.63□□□□□ -0.87
CTR9-202ENST00000524523 C14orf37Q86TY3 774 aa9.63□□□□□ -0.87
CTR9-202ENST00000524523 CRBNQ96SW2 442 aa9.63□□□□□ -0.87
CTR9-202ENST00000524523 C1orf167Q5SNV9 1468 aa9.62□□□□□ -0.87
CTR9-202ENST00000524523 CHL1O00533 1208 aa9.62□□□□□ -0.87
CTR9-202ENST00000524523 RGS20O76081 388 aa9.62□□□□□ -0.87
CTR9-202ENST00000524523 HMOX1P09601 288 aa9.62□□□□□ -0.87
CTR9-202ENST00000524523 GGCXP38435 758 aa9.62□□□□□ -0.87
CTR9-202ENST00000524523 USP46P62068 366 aa9.62□□□□□ -0.87
CTR9-202ENST00000524523 EXOSC9Q06265 439 aaKnown RBP9.62□□□□□ -0.87
CTR9-202ENST00000524523 PDE4DQ08499 809 aa9.62□□□□□ -0.87
CTR9-202ENST00000524523 MORN1Q5T089 497 aa9.62□□□□□ -0.87
CTR9-202ENST00000524523 ZKSCAN2Q63HK3 967 aa9.62□□□□□ -0.87
CTR9-202ENST00000524523 NKX2-3Q8TAU0 364 aa9.62□□□□□ -0.87
CTR9-202ENST00000524523 KIAA0232Q92628 1395 aa9.62□□□□□ -0.87
CTR9-202ENST00000524523 USP19O94966 1318 aa9.61□□□□□ -0.87
CTR9-202ENST00000524523 NUTM1Q86Y26 1132 aa9.61□□□□□ -0.87
CTR9-202ENST00000524523 PARP9Q8IXQ6 854 aa9.61□□□□□ -0.87
CTR9-202ENST00000524523 PIK3C2AO00443 1686 aa9.61□□□□□ -0.87
CTR9-202ENST00000524523 KIF1AQ12756 1690 aa9.61□□□□□ -0.87
CTR9-202ENST00000524523 PHRF1Q9P1Y6 1649 aaKnown RBP9.6□□□□□ -0.87
CTR9-202ENST00000524523 NPHP3Q7Z494 1330 aa9.6□□□□□ -0.87
CTR9-202ENST00000524523 KDM2BQ8NHM5 1336 aa9.6□□□□□ -0.87
CTR9-202ENST00000524523 RGPD1P0DJD0 1748 aa9.6□□□□□ -0.87
CTR9-202ENST00000524523 VAMP4O75379 141 aa9.6□□□□□ -0.87
CTR9-202ENST00000524523 GCP02774 474 aa9.6□□□□□ -0.87
CTR9-202ENST00000524523 CANXP27824 592 aaKnown RBP9.6□□□□□ -0.87
CTR9-202ENST00000524523 PPP1R18Q6NYC8 613 aa9.6□□□□□ -0.87
CTR9-202ENST00000524523 ATF7IPQ6VMQ6 1270 aa9.6□□□□□ -0.87
CTR9-202ENST00000524523 KRT28Q7Z3Y7 464 aa9.6□□□□□ -0.87
CTR9-202ENST00000524523 ARHGEF25Q86VW2 580 aa9.6□□□□□ -0.87
CTR9-202ENST00000524523 DZIP1LQ8IYY4 767 aaKnown RBP9.6□□□□□ -0.87
CTR9-202ENST00000524523 TMEM94Q12767 1356 aa9.6□□□□□ -0.87
CTR9-202ENST00000524523 FOXO3O43524 673 aa9.59□□□□□ -0.87
CTR9-202ENST00000524523 TLL1O43897 1013 aa9.59□□□□□ -0.87
CTR9-202ENST00000524523 C20orf194Q5TEA3 1177 aa9.59□□□□□ -0.87
CTR9-202ENST00000524523 RTF1Q92541 710 aaKnown RBP9.59□□□□□ -0.87
CTR9-202ENST00000524523 CLUAP1Q96AJ1 413 aa9.59□□□□□ -0.87
CTR9-202ENST00000524523 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.59□□□□□ -0.87
CTR9-202ENST00000524523 DDX19BQ9UMR2 479 aa9.59□□□□□ -0.87
CTR9-202ENST00000524523 SLC27A5Q9Y2P5 690 aa9.59□□□□□ -0.87
CTR9-202ENST00000524523 MSH6P52701 1360 aa9.59□□□□□ -0.87
CTR9-202ENST00000524523 SLIT3O75094 1523 aa9.58□□□□□ -0.88
CTR9-202ENST00000524523 ADH1BP00325 375 aa9.58□□□□□ -0.88
CTR9-202ENST00000524523 MVPQ14764 893 aaKnown RBP9.58□□□□□ -0.88
CTR9-202ENST00000524523 AMOTQ4VCS5 1084 aa9.58□□□□□ -0.88
CTR9-202ENST00000524523 SSH1Q8WYL5 1049 aa9.58□□□□□ -0.88
CTR9-202ENST00000524523 ORAI2Q96SN7 254 aa9.58□□□□□ -0.88
CTR9-202ENST00000524523 SPSB2Q99619 263 aa9.58□□□□□ -0.88
CTR9-202ENST00000524523 SMC4Q9NTJ3 1288 aa9.58□□□□□ -0.88
CTR9-202ENST00000524523 RGPD8O14715 1765 aaPredicted RBP9.58□□□□□ -0.88
CTR9-202ENST00000524523 NCAPD2Q15021 1401 aa9.57□□□□□ -0.88
CTR9-202ENST00000524523 NFAT5O94916 1531 aa9.57□□□□□ -0.88
CTR9-202ENST00000524523 PEAK1Q9H792 1746 aa9.57□□□□□ -0.88
CTR9-202ENST00000524523 GNAT3A8MTJ3 354 aa9.57□□□□□ -0.88
CTR9-202ENST00000524523 FMNL1O95466 1100 aaPredicted RBP9.57□□□□□ -0.88
CTR9-202ENST00000524523 Q3C1V9 767 aa9.57□□□□□ -0.88
CTR9-202ENST00000524523 TSR2Q969E8 191 aaKnown RBP9.57□□□□□ -0.88
CTR9-202ENST00000524523 BEGAINQ9BUH8 593 aa9.57□□□□□ -0.88
CTR9-202ENST00000524523 MBIPQ9NS73 344 aa9.57□□□□□ -0.88
CTR9-202ENST00000524523 RBM19Q9Y4C8 960 aaKnown RBP9.57□□□□□ -0.88
CTR9-202ENST00000524523 ABCC6O95255 1503 aa9.56□□□□□ -0.88
CTR9-202ENST00000524523 LMTK3Q96Q04 1460 aa9.56□□□□□ -0.88
CTR9-202ENST00000524523 HOXA2O43364 376 aa9.56□□□□□ -0.88
CTR9-202ENST00000524523 TWISTNBQ3B726 338 aaPredicted RBP9.56□□□□□ -0.88
CTR9-202ENST00000524523 AEBP1Q8IUX7 1158 aa9.56□□□□□ -0.88
CTR9-202ENST00000524523 FTSJ3Q8IY81 847 aaKnown RBP9.56□□□□□ -0.88
CTR9-202ENST00000524523 FRAT1Q92837 279 aaPredicted RBP9.56□□□□□ -0.88
CTR9-202ENST00000524523 API5Q9BZZ5 524 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms