RNA–Protein interactions for RNA: ENST00000524306.1

CLINT1-208, Transcript of clathrin interactor 1, humanhuman

TSL 1 (best)

Gene CLINT1, Length 2,905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-208ENST00000524306 HS1BP3Q53T59 392 aa6.63□□□□□ -1.35
CLINT1-208ENST00000524306 TMEM87AQ8NBN3 555 aa6.63□□□□□ -1.35
CLINT1-208ENST00000524306 SPRYD3Q8NCJ5 442 aa6.63□□□□□ -1.35
CLINT1-208ENST00000524306 RUFY2Q8WXA3 655 aa6.63□□□□□ -1.35
CLINT1-208ENST00000524306 JCADQ9P266 1359 aa6.62□□□□□ -1.35
CLINT1-208ENST00000524306 MBD3O95983 291 aa6.62□□□□□ -1.35
CLINT1-208ENST00000524306 GPATCH3Q96I76 525 aa6.62□□□□□ -1.35
CLINT1-208ENST00000524306 TMX3Q96JJ7 454 aa6.62□□□□□ -1.35
CLINT1-208ENST00000524306 KDM6AO15550 1401 aaPredicted RBP6.62□□□□□ -1.35
CLINT1-208ENST00000524306 PHLPP1O60346 1717 aa6.62□□□□□ -1.35
CLINT1-208ENST00000524306 PI4KAP2A4QPH2 592 aa6.62□□□□□ -1.35
CLINT1-208ENST00000524306 SURF6O75683 361 aaKnown RBP6.62□□□□□ -1.35
CLINT1-208ENST00000524306 PI4KAP1Q8N8J0 262 aa6.62□□□□□ -1.35
CLINT1-208ENST00000524306 LSG1Q9H089 658 aaKnown RBP6.62□□□□□ -1.35
CLINT1-208ENST00000524306 ZDHHC9Q9Y397 364 aa6.62□□□□□ -1.35
CLINT1-208ENST00000524306 C5P01031 1676 aa6.62□□□□□ -1.35
CLINT1-208ENST00000524306 SRGAP3O43295 1099 aa6.61□□□□□ -1.35
CLINT1-208ENST00000524306 CLCN1P35523 988 aa6.61□□□□□ -1.35
CLINT1-208ENST00000524306 CCDC173Q0VFZ6 552 aa6.61□□□□□ -1.35
CLINT1-208ENST00000524306 NUTM2GQ5VZR2 741 aa6.61□□□□□ -1.35
CLINT1-208ENST00000524306 BRINP3Q76B58 766 aa6.61□□□□□ -1.35
CLINT1-208ENST00000524306 TTC14Q96N46 770 aa6.61□□□□□ -1.35
CLINT1-208ENST00000524306 SPG7Q9UQ90 795 aa6.61□□□□□ -1.35
CLINT1-208ENST00000524306 NBPF7P0C2Y1 421 aaPredicted RBP6.61□□□□□ -1.35
CLINT1-208ENST00000524306 PDIA6Q15084 440 aa6.61□□□□□ -1.35
CLINT1-208ENST00000524306 LARP1Q6PKG0 1096 aaKnown RBP6.61□□□□□ -1.35
CLINT1-208ENST00000524306 USHBP1Q8N6Y0 703 aa6.61□□□□□ -1.35
CLINT1-208ENST00000524306 EVI5LQ96CN4 794 aa6.61□□□□□ -1.35
CLINT1-208ENST00000524306 LTV1Q96GA3 475 aaPredicted RBP6.61□□□□□ -1.35
CLINT1-208ENST00000524306 SLC52A2Q9HAB3 445 aa6.61□□□□□ -1.35
CLINT1-208ENST00000524306 ECHDC1Q9NTX5 307 aa6.61□□□□□ -1.35
CLINT1-208ENST00000524306 DISP2A7MBM2 1401 aa6.61□□□□□ -1.35
CLINT1-208ENST00000524306 NUP188Q5SRE5 1749 aa6.6□□□□□ -1.35
CLINT1-208ENST00000524306 NEK4P51957 841 aa6.6□□□□□ -1.35
CLINT1-208ENST00000524306 TSGA10IPQ3SY00 556 aa6.6□□□□□ -1.35
CLINT1-208ENST00000524306 CLASRPQ8N2M8 674 aaKnown RBP6.6□□□□□ -1.35
CLINT1-208ENST00000524306 ORAI2Q96SN7 254 aa6.6□□□□□ -1.35
CLINT1-208ENST00000524306 GRM8O00222 908 aa6.6□□□□□ -1.35
CLINT1-208ENST00000524306 ZBTB22O15209 634 aa6.6□□□□□ -1.35
CLINT1-208ENST00000524306 PHKG2P15735 406 aa6.6□□□□□ -1.35
CLINT1-208ENST00000524306 LRP10Q7Z4F1 713 aa6.6□□□□□ -1.35
CLINT1-208ENST00000524306 DCAF5Q96JK2 942 aa6.6□□□□□ -1.35
CLINT1-208ENST00000524306 ZSCAN31Q96LW9 406 aaPredicted RBP6.6□□□□□ -1.35
CLINT1-208ENST00000524306 MAP3K2Q9Y2U5 619 aa6.6□□□□□ -1.35
CLINT1-208ENST00000524306 TNS2Q63HR2 1409 aa6.6□□□□□ -1.35
CLINT1-208ENST00000524306 TOGARAM1Q9Y4F4 1720 aa6.6□□□□□ -1.35
CLINT1-208ENST00000524306 WDR33Q9C0J8 1336 aaKnown RBP6.6□□□□□ -1.35
CLINT1-208ENST00000524306 KCNQ3O43525 872 aa6.6□□□□□ -1.35
CLINT1-208ENST00000524306 RABL6Q3YEC7 729 aaPredicted RBP6.6□□□□□ -1.35
CLINT1-208ENST00000524306 ZNF790Q6PG37 636 aa6.6□□□□□ -1.35
CLINT1-208ENST00000524306 LRRC59Q96AG4 307 aaKnown RBP6.6□□□□□ -1.35
CLINT1-208ENST00000524306 ANO2Q9NQ90 1003 aa6.6□□□□□ -1.35
CLINT1-208ENST00000524306 SH2B1Q9NRF2 756 aaPredicted RBP6.6□□□□□ -1.35
CLINT1-208ENST00000524306 DDX49Q9Y6V7 483 aaKnown RBP6.6□□□□□ -1.35
CLINT1-208ENST00000524306 TRIM6-TRIM34B2RNG4 842 aa6.59□□□□□ -1.35
CLINT1-208ENST00000524306 TATP17735 454 aaPredicted RBP6.59□□□□□ -1.35
CLINT1-208ENST00000524306 VPS53Q5VIR6 699 aa6.59□□□□□ -1.35
CLINT1-208ENST00000524306 MPRIPQ6WCQ1 1025 aa6.59□□□□□ -1.35
CLINT1-208ENST00000524306 C14orf37Q86TY3 774 aa6.59□□□□□ -1.35
CLINT1-208ENST00000524306 UNC5CLQ8IV45 518 aa6.59□□□□□ -1.35
CLINT1-208ENST00000524306 IFNL2Q8IZJ0 200 aa6.59□□□□□ -1.35
CLINT1-208ENST00000524306 METTL22Q9BUU2 404 aaPredicted RBP6.59□□□□□ -1.35
CLINT1-208ENST00000524306 COPRSQ9NQ92 184 aa6.59□□□□□ -1.35
CLINT1-208ENST00000524306 PALD1Q9ULE6 856 aa6.59□□□□□ -1.35
CLINT1-208ENST00000524306 AXIN2Q9Y2T1 843 aa6.59□□□□□ -1.35
CLINT1-208ENST00000524306 MEGF6O75095 1541 aa6.59□□□□□ -1.35
CLINT1-208ENST00000524306 EIF2S2P20042 333 aaKnown RBP6.59□□□□□ -1.36
CLINT1-208ENST00000524306 NKX1-1Q15270 411 aaPredicted RBP6.59□□□□□ -1.36
CLINT1-208ENST00000524306 GAS2L3Q86XJ1 694 aa6.59□□□□□ -1.36
CLINT1-208ENST00000524306 ZGPATQ8N5A5 531 aaKnown RBP6.59□□□□□ -1.36
CLINT1-208ENST00000524306 RAPGEF4Q8WZA2 1011 aa6.59□□□□□ -1.36
CLINT1-208ENST00000524306 RILPL2Q969X0 211 aa6.59□□□□□ -1.36
CLINT1-208ENST00000524306 ZSWIM6Q9HCJ5 1215 aa6.59□□□□□ -1.36
CLINT1-208ENST00000524306 SLAIN2Q9P270 581 aa6.59□□□□□ -1.36
CLINT1-208ENST00000524306 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.59□□□□□ -1.36
CLINT1-208ENST00000524306 SNX14Q9Y5W7 946 aa6.59□□□□□ -1.36
CLINT1-208ENST00000524306 RPAP1Q9BWH6 1393 aaPredicted RBP6.58□□□□□ -1.36
CLINT1-208ENST00000524306 SPEF2Q9C093 1822 aa6.58□□□□□ -1.36
CLINT1-208ENST00000524306 APBB1O00213 710 aa6.58□□□□□ -1.36
CLINT1-208ENST00000524306 KIAA1211Q6ZU35 1233 aa6.58□□□□□ -1.36
CLINT1-208ENST00000524306 SYAP1Q96A49 352 aaPredicted RBP6.58□□□□□ -1.36
CLINT1-208ENST00000524306 KAZALD1Q96I82 304 aa6.58□□□□□ -1.36
CLINT1-208ENST00000524306 PDLIM2Q96JY6 352 aa6.58□□□□□ -1.36
CLINT1-208ENST00000524306 ANO8Q9HCE9 1232 aaPredicted RBP6.58□□□□□ -1.36
CLINT1-208ENST00000524306 C9orf78Q9NZ63 289 aaPredicted RBP6.58□□□□□ -1.36
CLINT1-208ENST00000524306 LIMCH1Q9UPQ0 1083 aa6.58□□□□□ -1.36
CLINT1-208ENST00000524306 ARFGEF2Q9Y6D5 1785 aa6.58□□□□□ -1.36
CLINT1-208ENST00000524306 WDR17Q8IZU2 1322 aa6.58□□□□□ -1.36
CLINT1-208ENST00000524306 LETM1O95202 739 aaPredicted RBP6.58□□□□□ -1.36
CLINT1-208ENST00000524306 SNRPA1P09661 255 aaKnown RBP6.58□□□□□ -1.36
CLINT1-208ENST00000524306 NECTIN1Q15223 517 aa6.58□□□□□ -1.36
CLINT1-208ENST00000524306 ZSCAN23Q3MJ62 389 aa6.58□□□□□ -1.36
CLINT1-208ENST00000524306 MCTP1Q6DN14 999 aa6.58□□□□□ -1.36
CLINT1-208ENST00000524306 GPR108Q9NPR9 543 aa6.58□□□□□ -1.36
CLINT1-208ENST00000524306 HMG20BQ9P0W2 317 aa6.58□□□□□ -1.36
CLINT1-208ENST00000524306 MED23Q9ULK4 1368 aa6.58□□□□□ -1.36
CLINT1-208ENST00000524306 NEURL1BA8MQ27 555 aa6.57□□□□□ -1.36
CLINT1-208ENST00000524306 PHF14O94880 888 aa6.57□□□□□ -1.36
CLINT1-208ENST00000524306 NEXNQ0ZGT2 675 aa6.57□□□□□ -1.36
CLINT1-208ENST00000524306 GCKRQ14397 625 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 151.4 ms