RNA–Protein interactions for RNA: ENST00000524226.5

PCM1-222, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 5,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-222ENST00000524226 USP19O94966 1318 aa3.09□□□□□ -1.92
PCM1-222ENST00000524226 GOLGA6L7A0A1B0GV03 622 aa3.09□□□□□ -1.92
PCM1-222ENST00000524226 USP8P40818 1118 aa3.09□□□□□ -1.92
PCM1-222ENST00000524226 CAVIN1Q6NZI2 390 aaKnown RBP3.09□□□□□ -1.92
PCM1-222ENST00000524226 ANKRD18AQ8IVF6 992 aa3.09□□□□□ -1.92
PCM1-222ENST00000524226 C9orf78Q9NZ63 289 aaPredicted RBP3.09□□□□□ -1.92
PCM1-222ENST00000524226 MST1RQ04912 1400 aa3.09□□□□□ -1.92
PCM1-222ENST00000524226 SLIT3O75094 1523 aa3.08□□□□□ -1.92
PCM1-222ENST00000524226 TRIM6-TRIM34B2RNG4 842 aa3.08□□□□□ -1.92
PCM1-222ENST00000524226 HOXB7P09629 217 aa3.08□□□□□ -1.92
PCM1-222ENST00000524226 RGPD1P0DJD0 1748 aa3.08□□□□□ -1.92
PCM1-222ENST00000524226 CRB1P82279 1406 aa3.08□□□□□ -1.92
PCM1-222ENST00000524226 NUCB1Q02818 461 aa3.08□□□□□ -1.92
PCM1-222ENST00000524226 HSP90AB4PQ58FF6 505 aa3.08□□□□□ -1.92
PCM1-222ENST00000524226 BICDL1Q6ZP65 573 aa3.08□□□□□ -1.92
PCM1-222ENST00000524226 FAM177BA6PVY3 158 aa3.08□□□□□ -1.92
PCM1-222ENST00000524226 ZBTB7BO15156 539 aaPredicted RBP3.08□□□□□ -1.92
PCM1-222ENST00000524226 CDC45O75419 566 aa3.08□□□□□ -1.92
PCM1-222ENST00000524226 ZKSCAN1P17029 563 aaPredicted RBP3.08□□□□□ -1.92
PCM1-222ENST00000524226 PIP4K2AP48426 406 aaPredicted RBP3.08□□□□□ -1.92
PCM1-222ENST00000524226 INTS3Q68E01 1043 aaKnown RBP3.08□□□□□ -1.92
PCM1-222ENST00000524226 SAMD1Q6SPF0 538 aaPredicted RBP3.08□□□□□ -1.92
PCM1-222ENST00000524226 RIC3Q7Z5B4 369 aa3.08□□□□□ -1.92
PCM1-222ENST00000524226 MNS1Q8NEH6 495 aa3.08□□□□□ -1.92
PCM1-222ENST00000524226 SLKQ9H2G2 1235 aaPredicted RBP3.08□□□□□ -1.92
PCM1-222ENST00000524226 INCENPQ9NQS7 918 aa3.08□□□□□ -1.92
PCM1-222ENST00000524226 HYPKQ9NX55 129 aa3.08□□□□□ -1.92
PCM1-222ENST00000524226 PCDH11XQ9BZA7 1347 aa3.08□□□□□ -1.92
PCM1-222ENST00000524226 PCDH11YQ9BZA8 1340 aa3.08□□□□□ -1.92
PCM1-222ENST00000524226 NFAT5O94916 1531 aa3.08□□□□□ -1.92
PCM1-222ENST00000524226 CHRNA2Q15822 529 aa3.08□□□□□ -1.92
PCM1-222ENST00000524226 RNF20Q5VTR2 975 aa3.08□□□□□ -1.92
PCM1-222ENST00000524226 SKAP1Q86WV1 359 aa3.08□□□□□ -1.92
PCM1-222ENST00000524226 DDX17Q92841 729 aaKnown RBP3.08□□□□□ -1.92
PCM1-222ENST00000524226 NAT10Q9H0A0 1025 aaKnown RBP3.08□□□□□ -1.92
PCM1-222ENST00000524226 GZF1Q9H116 711 aaPredicted RBP3.08□□□□□ -1.92
PCM1-222ENST00000524226 DBF4Q9UBU7 674 aaPredicted RBP3.08□□□□□ -1.92
PCM1-222ENST00000524226 DDX49Q9Y6V7 483 aaKnown RBP3.08□□□□□ -1.92
PCM1-222ENST00000524226 PES1O00541 588 aaKnown RBP3.08□□□□□ -1.92
PCM1-222ENST00000524226 LETM1O95202 739 aaPredicted RBP3.08□□□□□ -1.92
PCM1-222ENST00000524226 STARD3NLO95772 234 aa3.08□□□□□ -1.92
PCM1-222ENST00000524226 NUCB2P80303 420 aa3.08□□□□□ -1.92
PCM1-222ENST00000524226 HMGN5P82970 282 aaKnown RBP3.08□□□□□ -1.92
PCM1-222ENST00000524226 KRT24Q2M2I5 525 aa3.08□□□□□ -1.92
PCM1-222ENST00000524226 DPY19L2Q6NUT2 758 aa3.08□□□□□ -1.92
PCM1-222ENST00000524226 CCAR2Q8N163 923 aaKnown RBP3.08□□□□□ -1.92
PCM1-222ENST00000524226 CABLES1Q8TDN4 633 aa3.08□□□□□ -1.92
PCM1-222ENST00000524226 SMARCC1Q92922 1105 aaPredicted RBP3.08□□□□□ -1.92
PCM1-222ENST00000524226 CDCA7Q9BWT1 371 aaPredicted RBP3.08□□□□□ -1.92
PCM1-222ENST00000524226 SLAIN2Q9P270 581 aa3.08□□□□□ -1.92
PCM1-222ENST00000524226 ZNF219Q9P2Y4 722 aaPredicted RBP3.08□□□□□ -1.92
PCM1-222ENST00000524226 DLG5Q8TDM6 1919 aa3.08□□□□□ -1.92
PCM1-222ENST00000524226 GSE1Q14687 1217 aa3.07□□□□□ -1.92
PCM1-222ENST00000524226 C8orf34Q49A92 452 aa3.07□□□□□ -1.92
PCM1-222ENST00000524226 CCDC87Q9NVE4 849 aa3.07□□□□□ -1.92
PCM1-222ENST00000524226 SPATA31A3Q5VYP0 1347 aa3.07□□□□□ -1.92
PCM1-222ENST00000524226 F6X3S4 739 aa3.07□□□□□ -1.92
PCM1-222ENST00000524226 MYO1BO43795 1136 aa3.07□□□□□ -1.92
PCM1-222ENST00000524226 AIMP1Q12904 312 aaKnown RBP3.07□□□□□ -1.92
PCM1-222ENST00000524226 KIF22Q14807 665 aa3.07□□□□□ -1.92
PCM1-222ENST00000524226 ODF2Q5BJF6 829 aa3.07□□□□□ -1.92
PCM1-222ENST00000524226 HOMER1Q86YM7 354 aa3.07□□□□□ -1.92
PCM1-222ENST00000524226 DNAAF4Q8WXU2 420 aa3.07□□□□□ -1.92
PCM1-222ENST00000524226 DCAF5Q96JK2 942 aa3.07□□□□□ -1.92
PCM1-222ENST00000524226 LRRCC1Q9C099 1032 aa3.07□□□□□ -1.92
PCM1-222ENST00000524226 CHPF2Q9P2E5 772 aa3.07□□□□□ -1.92
PCM1-222ENST00000524226 OVOS2A0A0G2JMS6 1433 aa3.07□□□□□ -1.92
PCM1-222ENST00000524226 ERBB3P21860 1342 aa3.07□□□□□ -1.92
PCM1-222ENST00000524226 H0YHG0 523 aa3.07□□□□□ -1.92
PCM1-222ENST00000524226 RABEP1Q15276 862 aa3.07□□□□□ -1.92
PCM1-222ENST00000524226 DDB1Q16531 1140 aa3.07□□□□□ -1.92
PCM1-222ENST00000524226 BRINP3Q76B58 766 aa3.07□□□□□ -1.92
PCM1-222ENST00000524226 ERC1Q8IUD2 1116 aa3.07□□□□□ -1.92
PCM1-222ENST00000524226 SPRYD3Q8NCJ5 442 aa3.07□□□□□ -1.92
PCM1-222ENST00000524226 IL17REQ8NFR9 667 aa3.07□□□□□ -1.92
PCM1-222ENST00000524226 JDP2Q8WYK2 163 aa3.07□□□□□ -1.92
PCM1-222ENST00000524226 FMNL2Q96PY5 1086 aa3.07□□□□□ -1.92
PCM1-222ENST00000524226 C22orf23Q9BZE7 217 aa3.07□□□□□ -1.92
PCM1-222ENST00000524226 GNL3LQ9NVN8 582 aaKnown RBP3.07□□□□□ -1.92
PCM1-222ENST00000524226 RAB11FIP3O75154 756 aa3.07□□□□□ -1.92
PCM1-222ENST00000524226 ERLIN2O94905 339 aa3.07□□□□□ -1.92
PCM1-222ENST00000524226 RFX1P22670 979 aa3.07□□□□□ -1.92
PCM1-222ENST00000524226 CT47A1Q5JQC4 288 aaPredicted RBP3.07□□□□□ -1.92
PCM1-222ENST00000524226 SMC5Q8IY18 1101 aa3.07□□□□□ -1.92
PCM1-222ENST00000524226 ANKRD44Q8N8A2 993 aa3.07□□□□□ -1.92
PCM1-222ENST00000524226 ZCRB1Q8TBF4 217 aaKnown RBP3.07□□□□□ -1.92
PCM1-222ENST00000524226 PCMTD1Q96MG8 357 aaPredicted RBP3.07□□□□□ -1.92
PCM1-222ENST00000524226 LUC7LQ9NQ29 371 aaKnown RBP3.07□□□□□ -1.92
PCM1-222ENST00000524226 CCDC39Q9UFE4 941 aa3.07□□□□□ -1.92
PCM1-222ENST00000524226 ZNF335Q9H4Z2 1342 aaPredicted RBP3.07□□□□□ -1.92
PCM1-222ENST00000524226 MYCNP04198 464 aaPredicted RBP3.07□□□□□ -1.92
PCM1-222ENST00000524226 IL2RBP14784 551 aa3.07□□□□□ -1.92
PCM1-222ENST00000524226 EIF4A1P60842 406 aaKnown RBP3.07□□□□□ -1.92
PCM1-222ENST00000524226 SAFBQ15424 915 aaKnown RBP eCLIP3.07□□□□□ -1.92
PCM1-222ENST00000524226 CEP85Q6P2H3 762 aa3.07□□□□□ -1.92
PCM1-222ENST00000524226 CREBRFQ8IUR6 639 aa3.07□□□□□ -1.92
PCM1-222ENST00000524226 SLC52A2Q9HAB3 445 aa3.07□□□□□ -1.92
PCM1-222ENST00000524226 LGR6Q9HBX8 967 aa3.07□□□□□ -1.92
PCM1-222ENST00000524226 TOMM22Q9NS69 142 aa3.07□□□□□ -1.92
PCM1-222ENST00000524226 PXDNLA1KZ92 1463 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms